2024 taxonomy update for the family Circoviridae
2024
Varsani, Arvind | Harrach, Balázs | Roumagnac, Philippe | Benkő, Mária | Breitbart, Mya | Delwart, Eric | Franzo, Giovanni | Kazlauskas, Darius | Rosario, Karyna | Segalés, Joaquim | Dunay, Emily | Rukundo, Joshua | Goldberg, Tony, L | Fehér, Enikő | Kaszab, Eszter | Bányai, Krisztián | Krupovic, Mart | Arizona State University [Tempe] (ASU) | University of Cape Town | Hungarian Research Network (HUN-REN) | Institute for Veterinary Medical Research [Budapest] (AOTI) ; Centre for Agricultural Research [Budapest] (ATK) ; Hungarian Academy of Sciences (MTA)-Hungarian Academy of Sciences (MTA) | Plant Health Institute of Montpellier (UMR PHIM) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM) | College of Marine Science [St Petersburg, FL] ; University of South Florida [Tampa] (USF) | University of California [San Francisco] (UC San Francisco) ; University of California (UC) | Università degli Studi di Padova = University of Padua (Unipd) | Vilnius University [Vilnius] | National Institutes of Health [Bethesda, MD, USA] (NIH) | Universitat Autònoma de Barcelona = Autonomous University of Barcelona = Universidad Autónoma de Barcelona (UAB) | University of Wisconsin-Madison | Ngamba Island Chimpanzee Sanctuary - Chimpanzee Trust [Entebbe, Uganda] | University of Veterinary Medicine [Budapest, Hungary] (UNIVET) | Virologie des archées - Archaeal Virology ; Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047) ; Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS) | This work was partly supported by grant K146808 from the National Research, Development and Innovation Office, Hungary, awarded to Balázs Harrach. Enikő Fehér was supported by the National Laboratory of Virology, project no. RRF-2.3.1-21-2022-00010. Eszter Kaszab is also affiliated to One Health Institute, Faculty of Health Sciences, University of Debrecen and Department of Microbiology and Infectious Diseases, University of Veterinary Medicine Budapest. Additional support to Enikő Fehér and Eszter Kaszab was provided by the National Laboratory for Infectious Animal Diseases, Antimicrobial Resistance, Veterinary Public Health, and Food Chain Safety, RRF-2.3.1-21-2022-00001.
International audience
اظهر المزيد [+] اقل [-]إنجليزي. Circovirids have a circular single-stranded DNA genome packed into a small icosahedral capsid. They are classified within two genera, Circovirus and Cyclovirus, in the family Circoviridae (phylum Cressdnaviricota, class Arfiviricetes, order Cirlivirales). Over the last five years, a number of new circovirids have been identified, and, as a result, 54 new species have been created for their classification based on the previously established species demarcation criterion, namely, that viruses classified into different species share less than 80% genome-wide pairwise sequence identity. Of note, one of the newly created species includes a circovirus that was identified in human hepatocytes and suspected of causing liver damage. Furthermore, to comply with binomial species nomenclature, all new and previously recognized species have been (re)named in binomial format with a freeform epithet. Here, we provide a summary of the properties of circovirid genomes and their classification as of June 2024 (65 species in the genus Circovirus and 90 species in the genus Cyclovirus). Finally, we provide reference datasets of the nucleotide and amino acid sequences representing each of the officially recognized circovirid species to facilitate further classification of newly discovered members of the Circoviridae.
اظهر المزيد [+] اقل [-]المعلومات البيبليوغرافية
تم تزويد هذا السجل من قبل Institut national de la recherche agronomique