Highly Contiguous Genome Resource of Colletotrichum fructicola Generated Using Long-Read Sequencing
2020
Xiaofei Liang | Mengyu Cao | Sen Li | Yuanyuan Kong | Jeffrey A. Rollins | Rong Zhang | Guangyu Sun
Colletotrichum fructicola is a plant-pathogenic fungus with a broad host range. It causes significant losses to important crops, including apple, pear, strawberry, and other Rosaceae and non-Rosaceae species. To date, two short read–based C. fructicola genomes are publicly available, but both are fragmented. In this study, we re-sequenced the genome of C. fructicola using nanopore long-read technology and refined the assembly with Hi-C map data. The resulting high-quality assembly is an important resource for further comparative and experimental studies with C. fructicola.
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