In this study multiplex PCR was used for typing of Clostridium perfringens isolates from soil, clinically healthy and diseased sheep. Clostridium perfringens was isolated from 41 out of 100 soil samples, 12 out of 100 clinically healthy sheep and 118 out of 200 sheep with enterotoxaemia signs. Genotyping of 41 isolates from soil indicated that 29 (70.73%) were type A, 3 (7.31%) were type B and 9 (21.95%) were type D. Of 12 isolates from clinically healthy sheep 6 (50%) were type A and 6(50%) were type D. Of 118 isolates from diseased sheep 42 (35.59%) were type A, 22 (18.64%) were type B and 54 (45.76%) were type D. This result indicates that Clostridium perfringens type A, B and D are the main types causing enterotoxaemia in sheep in Egypt and Clostridium perfringens type A must be included in any vaccine programme to ensure optimum protection.

In this study, 50 vaccinated broiler and one layer flock from Beni-Suef, Fayoum and Minia governorates were investigated. Necropsy lesions were suggestive of LPAI-H9N2 or NDV. Samples of tracheal swabs and organs were subjected for viral isolation and molecular characterization. Specific RT-PCR for the NDV F-gene and the HA gene of the LPAI-H9N2 viruses was used. Virus isolation and primary identification using HI test revealed 37.5 and 43.3-46.2% prevalence for LPAI-H9N2 and NDV viruses, respectively. Phylogenetic analysis of partial sequences of the F gene showed that NDV viruses belong to genotype II and VII-1.1. as indicated by the F0 protein proteolytic cleavage site motifs (aa112-117) of the NDV strains F-gene. The vNDV isolates were 98.7-99.3% and 96.6-98.9% identical to each other based on nucleotide and amino acid identities, respectively. Compared to their counterpart isolates; the lentogenic strains shared 98-99.2% and 96.3-98.1% nucleotide and amino acid identities to the LaSota reference strain. The LPAI-H9N2 phylogeny of the HA gene showed that the 2 isolates obtained in this study are related to each other and related to recent 2016-2018 Egyptian H9N2 strains. Notably, the 2 strains showed higher identity (≥99%) to recent Israeli 2018 isolates with several amino acid changes. The current study revealed wide spread of both NDV and LPAI-H9N2 viruses. The vaccine failure and the mismatch between the vaccine and circulating NDV viruses is the most probable cause of current outbreaks. The LPAI-H9N2 viruses are divergent form their ancestral viruses in Egypt indicating continuous circulation and vaccine pressure induced mutations

During 2005, velogenic Newcastle disease virus (NDV) caused a major outbreak among commercial broiler chicken in Egypt. The outbreak raised concerns regarding the protective immunity of commercially available vaccines for prevention and control of this virus in poultry. The virus was isolated from broiler farm suffered from more than 95% mortalities. The isolate was confirmed not to be avian influenza virus (AIV) by rapid chromatographic strip test, and characterized as NDV using reverse transcription-polymerase chain reaction (RT-PCR) which amplified a portion of the fusion gene of NDV and haemagglutination inhibition (HI) test. This isolate confirmed to be velogenic viscerotropic NDV by mean death time (MDT) test and pathogenicity to 7-week old chickens. We tried to determine whether the existing commercial live NDV La Sota vaccine could provide protection against the isolated virus or not. Birds received a single dose of live La Sota type vaccine at 3 weeks of age and were challenged 2 weeks postvaccination with a lethal dose of NDV. Results indicated that the live vaccine did not protect against morbidity but reduced mortality in comparison to controls. All unvaccinated control chickens challenged with NDV died within 5 days post-challenge (pc). Protection from disease did not correlate with the presence of antibody titers (determined by HI) at day of challenge. These results underscore the need to develop new NDV vaccines and vaccine strategies for use during outbreak situations to protect birds from both disease and infection and to reduce virus shedding.

Brucellosis is a major constraint to livestock production that still enzootic in livestock in many developing countries including Egypt. This study was conducted with the general objective of establishing the bacteriological status of bovine brucellosis in 15 governorates in Egypt during 2020-2021 to determine the circulating Brucella species on bacteriological and molecular basis. Clinical samples collected included milk or udder secretions, vaginal discharges, fetal membranes and stomach contents of aborted fetuses from dairy cows with history of brucellosis. In addition, lymph nodes (retropharyngeal, prescapular, prefemoral, internal iliac and supramammary) from carcasses of serologically positive animals were obtained from different localities for isolation and identification of Brucella organisms. A total of 136 Brucella isolates were recovered from cattle in different governorates, Egypt. These include, 107 isolates of Brucella melitensis biovar 3 identified on bacteriological and molecular basis from Aswan, Beheira, Beni Suef, Dakahlia, Damietta, Fayoum, Gharbia, Giza, Ismailia, Kafr El-Sheikh, Luxor, Monufia, Port Said, Qalyubia and Sharqia governorates. On the other hand, 29 Brucella abortus biovar 1 isolates were recovered from cattle from Beni Suef, Dakahlia, Damietta, Kafr El-Sheikh, Monufia, Port Said and Sharqia governorates. Molecular identification using primer sequences targeting IS711 gene confirmed Brucella on genus level. Multiplex PCR has amplified four fragments of 450bp, 587 bp, 1071 bp, and1682 bp characteristic for B. melitensis biovar 3, and three fragments of 450bp, 587 bp, and 1682 bp for B. abortus biovar 1. The identification of Brucella spp. in different farm animals of 15 Egyptian governorates highlights the dynamics and role of cattle in dissemination of Brucella infection all over the country. The obtained results indicate that the actual Brucellosis status during the years 2020 and 2021 refers to that B. melitensis biovar 3 and B. abortus biovar 1 are the prevalent types circulating in different Egyptian governorates.

lumpy skin disease virus (LSDV) was isolated, from naturally infected cattle that have a history of previous vaccination with live attenuated sheep pox virus (SPV) vaccine. The virus was isolated on chorio-allantoic membranes (CAM) of embryonated chicken eggs (ECE) and Madin Darby Bovine Kidney Cells (MDBK) and identified by agar gel precipitation test (AGPT) and immunofluorescent antibody technique (IFA). Characteristic pock lesions and intracyptoplasmic flourescene granules are identified respectively. Molecular characterization using polymerase chain reaction (PCR) using specific primer for G-Protein Coupled Chemokine Receptor Gene of LSDV isolates specific amplified product 554 bp. Sequence analysis revealed tow new isolates of LSDV.

Molecular detection and differentiation of Pasteurella multocida strain involved in a separate fowl cholera outbreak in a turkey flock farm located in El-Menofia Governorate, Egypt early 2008 was investigated. The isolated strain was compared with an Egyptian Pasteurella multocida isolate that was previously isolated from turkey flock during last decade besides four vaccinal strain (A:5, A:8, A:9 and D:2) on phenotypic and genotypic characterization basis. Phenotypically all the strains were similar as all the strains produce non haemolytic colonies on blood agar, and all the strains revealed similar biochemial behaviour. On the other hand, the genomic typing of all the stains using rep-PCR techniques [repetitive BOX elements, enterobacterial repetitive intergenic consensus (ERIC) and repetitive extragenic palindromic (REP) polymerase chain reaction (PCR)] differentiated the six Pasteurella multocida strains into six different profiles. The molecular identity between the Pasteurella multocida 2008 strain and the previously isolated strain was 76.6 % and were ranged from 65.2% to 79.2% with the 4 vaccinal strains. These results reported the continuous mutations of the field Pasteurella multocida strains among poultry flocks in Egypt indicating the urgent need for the frequent and continuous molecular epidemiological investigations of fowl cholera outbreaks in various poultry flocks to detect these new strains and update the fowl cholera vaccines.

The present study deals with a monogenean parasite infecting, some marine fish through light and scan electron microscopy. It revealed that the percentage of infection was 48% (14 out of 50 fish), 28% (14 out of 50 fish), 22% (11 out of 50 fish) and 16% (8 out of 50 fish) in Diplodus noct, Gerres oyena, Lethrinus elongates and Siganus revulatus, respectively. The present work recorded Paranaella diplodae (Polyopisthocotylea; Microcotylidae; Monogenea) as a new species collected from the investigated fish gills. They are lanculate flukes, the haptor is not distinguished from the body proper approximately 1/3 of the whole body length. The surface topography of the parasite bears small pits and conspicuous transverse folds and richly supplied with papillae-like unicellate sensory ending. The opisthohaptor is typical of Microcotylidae. The clamp structure and the haptoral tegument are similar to the rest of the body

Seroprevalence of Babesia ovis in sheep and goats was studied in Siwa Oasis between January 2002 and January 2003. A total of 240 blood samples were collected from 108 sheep and 132 goats for preparation of blood smears and for separation of serum samples and tested against B. ovis by using IFAT. B. ovis was detected in 55 (50.92%) and 59 (44.69%) blood smears examined in sheep andgoats, respectively. The overall prevalence of B. ovis infection was 71.3% in sheep and 68.2% in goat using IFAT. The seasonal prevalence of B.ovis peaked in both spring and summer as revealed by blood smear examination and IFAT. A total of 143 ticks were collected from 62 sheep and 81 goats during the study. The ticks examined were Rhipicephalus turanicus (75.52%) and Hyalomma anatolicum (24.48%).

Feline parvovirus infection (FPV) is one of the serious diseases in Kittens that causes substantial morbidity and death. For the treatment of affected cats and the prevention of disease spread, early diagnosis of FPV infection is critical. To our knowledge, there have been no reports about the disease’s situation in Egypt’s Assiut province. As a result, the goal of this study was to find out how common FPV infection is among ill cats in this province. A total of 30 cats suspected of being infected with FPV were screened using an antigen rapid test to determine whether they were clinically suspicious. To determine the prevalence of FPV, each investigated cat’s age, sex, breed, season, lifestyle (whether kept indoors or outdoors), and immunization were all documented. Overall, 26.7% of examined cats were affected. FPV infection was more common in young, unvaccinated cats who lived outdoor. Epizootiological monitoring of the prevalence rate based on cat breeds and sex revealed no statistically significant differences. In terms of season, spring had the highest infection rate (57.1%), followed by winter (33.3%), and autumn (7.69%). The rapid one-step test is a useful diagnostic tool for detecting FPV, which was found in the research area’s cats.

FMD virus type A/1/ Egypt 2006 was inactivated with 0.1 M of BEI (Binary ethylene imine) formed by cyclization of 2- Bromoethyl-amine hydrobromide (BEA) in 0.2 N NaoH at 37oC with PH 8.0 for 24 hours. The virus was complete inactivated after 15 hours post inactivation. No residual virus particles were detected when inoculated in tissue culture. The inactivation rates are linear with a regular loss of titer ranged from 0.5- 1.0 log10 / hour. Control sample of virus at 37oC without BEI showed only a loss of 1.0 log from the original infectivity titer after 24 hours. The sample of virus which kept at -20oC, without BEI, showed loss 0.3 log10 from its original infectivity titer after 24 hours. There is no change in the complement fixing antigen before and after inactivation process with BEI inactivator and in the CFT 7 dilution of antigen was stable (fixed) pre and post inactivation of virus. Also it was found that the inactivation rate of BEI was higher than the inactivation with pure Ethylenimine (EI) and formalin.