Private wells in Ireland and elsewhere have been shown to be prone to microbial contamination with the main suspected sources being practices associated with agriculture and domestic wastewater treatment systems (DWWTS). While the microbial quality of private well water is commonly assessed using faecal indicator bacteria, such as Escherichia coli, such organisms are not usually source-specific, and hence cannot definitively conclude the exact origin of the contamination. This research assessed a range of different chemical contamination fingerprinting techniques (ionic ratios, artificial sweeteners, caffeine, fluorescent whitening compounds, faecal sterol profiles and pharmaceuticals) as to their use to apportion contamination of private wells between human wastewater and animal husbandry wastes in rural areas of Ireland. A one-off sampling and analysis campaign of 212 private wells found that 15% were contaminated with E. coli. More extensive monitoring of 24 selected wells found 58% to be contaminated with E. coli on at least one occasion over a 14-month period. The application of fingerprinting techniques to these monitored wells found that the use of chloride/bromide and potassium/sodium ratios is a useful low-cost fingerprinting technique capable of identifying impacts from human wastewater and organic agricultural contamination, respectively. The artificial sweetener acesulfame was detected on several occasions in a number of monitored wells, indicating its conservative nature and potential use as a fingerprinting technique for human wastewater. However, neither fluorescent whitening compounds nor caffeine were detected in any wells, and faecal sterol profiles proved inconclusive, suggesting limited suitability for the conditions investigated.

Nitrous oxide (N₂O) direct soil emissions from agriculture are often estimated using the default IPCC emission factor (EF) of 1%. However, a large variation in EFs exists due to differences in environment, crops and management. We developed an approach to determine N₂O EFs that depend on N-input sources and environmental factors. The starting point of the method was a monitoring study in which an EF of 1% was found. The conditions of this experiment were set as the reference from which the effects of 16 sources of N input, three soil types, two land-use types and annual precipitation on the N₂O EF were estimated. The derived EF inference scheme performed on average better than the default IPCC EF. The use of differentiated EFs, including different regional conditions, allows accounting for the effects of more mitigation measures and offers European countries a possibility to use a Tier 2 approach.

The diffusive gradients in thin films (DGT) technique was evaluated in modelling wheat (Triticum aestivum) arsenic toxicity using a dataset of As-contaminated soil samples (n=28) collected from former sheep dip sites. Above ground wheat biomass from a 21-day early growth bioassay was adopted as the response variable and the dose–response relationships were modelled using the three-parameter sigmoid equation. The DGT-derived effective soil solution As to P concentration ratios corresponded strongly to the differences in the response variable. With a single sample identified as an outlier, the 95% confidence interval for the effective soil solution As/P molar concentration ratio which resulted in a 50% reduction in the response (EC50) was 0.168–0.360. While the DGT-derived soil measure of As/P ratio was shown as a promising phytotoxicity predictor, the influence of P nutrition on the dose–response relationship deserves further consideration.

This study investigated if atmospheric ammonia (NH3) pollution around a sheep farm influences the photosynthetic performance of the lichens Evernia prunastri and Pseudevernia furfuracea. Thalli of both species were transplanted for up to 30 days in a semi-arid region (Crete, Greece), at sites with concentrations of atmospheric ammonia of ca. 60 μg/m3 (at a sheep farm), ca. 15 μg/m3 (60 m from the sheep farm) and ca. 2 μg/m3 (a remote area 5 km away). Lichen photosynthesis was analysed by the chlorophyll a fluorescence emission to identify targets of ammonia pollution. The results indicated that the photosystem II of the two lichens exposed to NH3 is susceptible to this pollutant in the gas-phase. The parameter PIABS, a global index of photosynthetic performance that combines in a single expression the three functional steps of the photosynthetic activity (light absorption, excitation energy trapping, and conversion of excitation energy to electron transport) was much more sensitive to NH3 than the FV/FM ratio, one of the most commonly used stress indicators.

Animal wastewater lagoons nearby concentrated animal feeding operations (CAFOs) represent the latest tendency in global animal farming, severely impacting the magnitude of greenhouse gas emissions, including nitrous oxide (N₂O). We hypothesized that lagoon wastewater could be supersaturated with N₂O as part of incomplete microbial nitrification/denitrification processes, thereby regulating the N₂O partitioning in the gaseous phase. The objectives of this study were: (i) to investigate the magnitude of dissolved N₂O concentrations in the lagoon; and (ii) to determine the extent to which supersaturation of N₂O occurs in wastewater lagoons. Dissolved N₂O concentrations in the wastewater samples were high, ranging from 0.4 to 40.5 μg N2O mL⁻¹. Calculated dissolved N₂O concentrations from the experimentally measured partition coefficients were much greater than those typically expected in aquatic systems (<0.6 μg N₂O mL⁻¹). Knowledge of the factors controlling the magnitude of N₂O supersaturation could potentially bridge mass balance differences between in situ measurements and global N₂O models. Supersaturation of nitrous oxide may occur in lagoons near concentrated animal feeding operations.

This study investigated potential ammonia impacts on a sand dune nature reserve 600 m upwind of an intensive poultry unit. Ammonia concentrations and total nitrogen deposition were measured over a calendar year. A series of ammonia and nitrogen exposure experiments using dune grassland species were conducted in controlled manipulations and in the field. Ammonia emissions from the intensive poultry unit were detected up to 2.8 km upwind, contributing to exceedance of critical levels of ammonia 800 m upwind and exceedance of critical loads of nitrogen 2.8 km upwind. Emissions contributed 30% of the total N load in parts of the upwind conservation site. In the nitrogen exposure experiments, plants showed elevated tissue nitrogen contents, and responded to ammonia concentrations and nitrogen deposition loads observed in the conservation site by increasing biomass. Estimated long-term impacts suggest an increase in the soil carbon pool of 9% over a 50-year timescale.

A liquid chromatography-tandem mass spectrometry (LC-MS/MS) method was developed for the simultaneous analysis of 6 ectoparasiticides – 2 synthetic pyrethroids (deltamethrin, cypermethrin) and 4 macrocyclic lactones (abamectin, doramectin, ivermectin and eprinomectin) in biosolids. The method was used to investigate the occurrence of these ectoparasiticides in beef cattle feedlot wastes in Australia from 5 commercial feedlot operations which employ varying waste management practices. Deltamethrin and cypermethrin were not detected in any of the samples while abamectin, ivermectin, doramectin and eprinomectin were detected in some of the samples with concentrations ranging from 1 to 36 μg/kg dry weight (d.w.) freeze dried feedlot waste. Levels of macrocyclic lactones detected in the feedlot wastes varied and were dependent on sample type. The effect of seasonal variations and waste management practices were also investigated in this study.

To determine if current sheep/beef farming practices affect pesticide residues in streams, current-use and legacy chlorinated pesticides were quantified in 100 sediment samples from 15 streams on the South Island of New Zealand. The study involved five blocks of three neighboring farms, with each block containing farms managed by organic, integrated and conventional farming practices. Significantly higher concentrations of dieldrin, ∑ endosulfans, ∑ current-use pesticides, and ∑ chlorinated pesticides were measured in sediments from conventional farms compared to organic and integrated farms. However, streams in the latter two farming categories were not pesticide-free and sometimes contained relatively high concentrations of legacy pesticides. Comparison of measured pesticide concentrations with sediment quality guidelines showed that, regardless of farming practice, mean pesticide concentrations were below the recommended toxicity thresholds. However, up to 23% of individual samples contained chlorpyrifos, endosulfan sulfate, ∑ DDT, dieldrin, or ∑ chlordane concentrations above these thresholds.

The aim of this study is to illustrate the importance of farm scale heterogeneity on nitrogen (N) losses in agricultural landscapes. Results are exemplified with a chain of N models calculating farm-N balances and distributing the N-surplus to N-losses (volatilisation, denitrification, leaching) and soil-N accumulation/release in a Danish landscape. Possible non-linearities in upscaling are assessed by comparing average model results based on (i) individual farm level calculations and (ii) averaged inputs at landscape level. Effects of the non-linearities that appear when scaling up from farm to landscape are demonstrated. Especially in relation to ammonia losses the non-linearity between livestock density and N-loss is significant (p > 0.999), with around 20–30% difference compared to a scaling procedure not taking this non-linearity into account. A significant effect of farm type on soil N accumulation (p > 0.95) was also identified and needs to be included when modelling landscape level N-fluxes and greenhouse gas emissions.