Microplastic contamination was investigated in the gut contents of an economically important estuarine top predator, Cynoscion acoupa, according to spatiotemporal and ontogenetic use of a tropical estuary. Microplastic contamination was found in more than half of the analysed fish. Ingested microplastics were classified by type, colour and length with most of the particles consisting of filaments (<5 mm). Longer filaments were more frequently ingested in the upper estuary and smaller filaments in the lower estuary, as a result of differences in hydrodynamic forces and proximity to the probable input sources. The river is likely an important source of filaments to the estuary and filaments ingested in the upper estuary showed little sign of weathering, when compared with those from the lower estuary, which are subject to intense weathering and consequent break-up of particles to smaller sizes. Most filaments, of all colours, accumulated in adults of C. acoupa, which are more susceptible to contamination through both direct ingestion and trophic transference as they shift their feeding mode to piscivory. Moreover, the highest ingestion of filaments in adults occurred in the lower estuary, during the late rainy season, likely associated with the intense fishing activities in this habitat, which results in a greater input of filaments from fishing gear, which are mainly blue in colour. Overall, 44% of the ingested filaments were blue, 20% purple, 13% black, 10% red and 12% white. The next most common colour, the purple filaments, are most likely blue filaments whose colour has weathered to purple. Red filaments were proportionally more ingested in the lower estuary, indicating a coastal/oceanic source. White and black filaments were more commonly ingested in the inner estuary, suggesting that they have a riverine origin and/or were actively ingested by juveniles and sub-adults, which inhabit the inner estuary and have zooplankton as an important food resource.

This study is the first comprehensive evaluation of total Hg and methylmercury (MeHg) concentrations in wild marine fish from an estuarine and a coastal ecosystem in southern China. A total of 571 fish from 54 different species were examined. Our results showed that the Hg levels were generally low in the fish, and the Hg levels were below 30 ng g−1 (wet weight) for 82% of the samples, which may be related to the reduced size of the fish and altered food web structure due to overfishing. Decreased coastal wetland coverage and different carbon sources may be responsible for the habitat-specific Hg concentrations. The degree of biomagnification was relatively low in the two systems.

Algal toxins or red-tide toxins produced during algal blooms are naturally-derived toxic emerging contaminants (ECs) that may kill organisms, including humans, through contaminated fish or seafood. Other ECs produced either naturally or anthropogenically ultimately flow into marine waters. Pharmaceuticals are also an important pollution source, mostly due to overproduction and incorrect disposal. Ship breaking and recycle industries (SBRIs) can also release various pollutants and substantially deteriorate habitats and marine biodiversity. Overfishing is significantly increasing due to the global food crisis, caused by an increasing world population. Organic matter (OM) pollution and global warming (GW) are key factors that exacerbate these challenges (e.g. algal blooms), to which acidification in marine waters should be added as well. Sources, factors, mechanisms and possible remedial measures of these challenges to marine ecosystems are discussed, including their eventual impact on all forms of life including humans.

Some of the main threats to coral reefs come from human actions on marine environment, such as tourism, overfishing and pollution from urban development. While several studies have demonstrated an association between bacteria and corals, demonstrating how these communities react to different anthropogenic stressors, yeast communities associated with corals have received far less attention from researchers. The aim of this work was therefore to describe cultivable yeasts associated with three coral species and to evaluate the influence of sewage discharge on yeasts community. We obtained 130 isolates, mostly belonging to phylum Ascomycota and many of them had previously been isolated from human samples or are considered pathogens. The mycobiota was more similar among corals collected from the same reef, indicating that the composition of reef yeast community is more influenced by environmental conditions than host species. We suggest further studies to elucidate which factors are most influential on the composition of the coral-associated yeast community.

Marine debris is a recognized global ecological concern. Little is known about the extent of the problem in the Mediterranean Sea regarding litter distribution and its influence on deep rocky habitats. A quantitative assessment of debris present in the deep seafloor (30–300m depth) was carried out in 26 areas off the coast of three Italian regions in the Tyrrhenian Sea, using a Remotely Operated Vehicle (ROV). The dominant type of debris (89%) was represented by fishing gears, mainly lines, while plastic objects were recorded only occasionally. Abundant quantities of gears were found on rocky banks in Sicily and Campania (0.09–0.12 debris m−2), proving intense fishing activity. Fifty-four percent of the recorded debris directly impacted benthic organisms, primarily gorgonians, followed by black corals and sponges. This work provides a first insight on the impact of marine debris in Mediterranean deep ecosystems and a valuable baseline for future comparisons.

The status of Kuwait’s fisheries landings and relative abundance for major species was reviewed using research data from Kuwait Institute for Scientific Research and landing data from the Kuwait’s Central Statistical Bureau. Landing data showed significant decreases for major commercial species such as zobaidy (Pampus argenteus), suboor (Tenualosa ilisha), hamoor (Epinephelus coioides), newaiby (Otolithes ruber) and hamra (Lutjanus malabaricus) while abundance data for the shrimp Penaeus semisulcatus showed significant reduction in the recent years mainly because of overfishing. The catch-rate data showed continuous decline for major species such as zobaidy, newaiby and hamoor, which indicate that stock abundances of these species are low. The reduction in stock abundance in context with changes in habitat quality, particularly the effects of reduced discharge of the Shatt Al-Arab, is discussed.

Coral reefs in the Gulf of Thailand are highly under-investigated regarding responses to anthropogenic stressors. Thus, this study simulated overfishing and eutrophication using herbivore exclosure cages and slow-release fertilizer to study the in-situ effects on benthic algae and invertebrate settlement in a coral reef of Koh Phangan, Thailand. Settlement of organisms and the development of organic matter on light-exposed and shaded tiles were quantified weekly/biweekly over a study period of 12weeks. Simulated eutrophication did not significantly influence response parameters, while simulated overfishing positively affected dry mass, turf algae height and fleshy macroalgae occurrence on light-exposed tiles. On shaded tiles, settlement of crustose coralline algae decreased, while abundances of ascidians increased compared to controls. An interactive effect of both stressors was not observed. These results hint to herbivory as actual key controlling factor on the benthic community, and fleshy macroalgae together with ascidians as potential bioindicators for local overfishing.

Recent work suggesting that fisheries depletions have turned the corner is misplaced because analysis was based largely on fisheries from better-managed developed-world fisheries. Some indicators of status show improvements in the minority of fisheries subjected to formal assessment. Other indicators, such as trophic level and catch time series, have been controversial. Nevertheless, several deeper analyses of the status of the majority of world fisheries confirm the previous dismal picture: serious depletions are the norm world-wide, management quality is poor, catch per effort is still declining. The performance of stock assessment itself may stand challenged by random environmental shifts and by the need to accommodate ecosystem-level effects. The global picture for further fisheries species extinctions, the degradation of ecosystem food webs and seafood security is indeed alarming. Moreover, marine ecosystems and their embedded fisheries are challenged in parallel by climate change, acidification, metabolic disruptors and other pollutants. Attempts to remedy the situation need to be urgent, focused, innovative and global.

Understanding the patterns of genetic diversity of fish species is essential for marine conservation and management. This is particularly important in the Arabian Gulf where marine life is subject to extreme environmental conditions that could impact genetic diversity. Here we assess genetic diversity of the most commercially important fish in the United Arab Emirates; groupers (Epinephelus spp.). Sequencing of 973bp mitochondrial DNA from 140 tissue samples collected in four main fish markets revealed 58 haplotypes clustered within three groups. Data analysis revealed the presence of three distinct Epinephelus species being marketed as one species (hammour): Epinephelus coioides, Epinephelus areolatus and Epinephelus bleekeri. We report species-specific genetic markers and demonstrate that all three species exhibit relatively low levels of genetic variation, reflecting the effect of overfishing and environmental pressures. In light of the genetic evidence presented here, conservation and management of groupers in the UAE warrant the implementation of species-specific measures.