Riverine ecosystems can have tipping points at which the system shifts abruptly to alternate states, although quantitative characterization is extremely difficult. Here we show, through critical analysis of two different reach scale (25 m and 50 m) studies conducted downstream of two point sources, two tributaries (main stem and confluences) and a 630 km segment of the Ganga River, that human-driven benthic hypoxia/anoxia generates positive feedbacks that propels the system towards a contrasting state. Considering three positive feedbacks-denitrification, sediment-P- and metal-release as level determinants and extracellular enzymes (β-D-glucosidase, protease, alkaline phosphatase and FDAase) as response determinants, we constructed a ‘river ecosystem resilience risk index (RERRI)’ to quantitatively characterize tipping points in large rivers. The dynamic fit intersect models indicated that the RERRI<4 represents a normal state, 4–18 a transition where recovery is possible, and >18 an overstepped condition where recovery is not possible. The resilience risk index, developed for the first time for a lotic ecosystem, can be a useful tool for understanding the tipping points and for adaptive and transformative management of large rivers.

GeoChip, a comprehensive gene microarray, was used to examine changes in microbial functional gene structure throughout the 4-year life cycle of a pilot-scale ethanol blend plume, including 2-year continuous released followed by plume disappearance after source removal. Canonical correlation analysis (CCA) and Mantel tests showed that dissolved O2 (which was depleted within 5 days of initiating the release and rebounded 194 days after source removal) was the most influential environmental factor on community structure. Initially, the abundance of anaerobic BTEX degradation genes increased significantly while that of aerobic BTEX degradation genes decreased. Gene abundance for N fixation, nitrification, P utilization, sulfate reduction and S oxidation also increased, potentially changing associated biogeochemical cycle dynamics. After plume disappearance, most genes returned to pre-release abundance levels, but the final functional structure significantly differed from pre-release conditions. Overall, observed successions of functional structure reflected adaptive responses that were conducive to biodegradation of ethanol-blend releases.

Seagrass ecosystems exist throughout Pacific Island Countries and Territories (PICTs). Despite this area covering nearly 8% of the global ocean, information on seagrass distribution, biogeography, and status remains largely absent from the scientific literature. We confirm 16 seagrass species occur across 17 of the 22 PICTs with the highest number in Melanesia, followed by Micronesia and Polynesia respectively. The greatest diversity of seagrass occurs in Papua New Guinea (13 species), and attenuates eastward across the Pacific to two species in French Polynesia. We conservatively estimate seagrass extent to be 1446.2 km2, with the greatest extent (84%) in Melanesia. We find seagrass condition in 65% of PICTs increasing or displaying no discernible trend since records began. Marine conservation across the region overwhelmingly focuses on coral reefs, with seagrass ecosystems marginalised in conservation legislation and policy. Traditional knowledge is playing a greater role in managing local seagrass resources and these approaches are having greater success than contemporary conservation approaches. In a world where the future of seagrass ecosystems is looking progressively dire, the Pacific Islands appears as a global bright spot, where pressures remain relatively low and seagrass more resilient.

Seagrass beds are recognized as pivotal and among the most vulnerable coastal marine ecosystems globally. The eelgrass Zostera marina L. is the most widely distributed seagrass species and dominates the temperate northern hemisphere. However, an alarming decline in seagrass has been occurring worldwide due to multiple stressors. Seagrass meadow degradation is particularly serious in the Bohai Sea, in temperate China; however, large areas (> 500 ha) of seagrass meadows and population recruitment have rarely been reported in this area. In the present study, we report on a large eelgrass bed in a eutrophic bay of the Bohai Sea. Sonar and field survey methods were used to investigate the distribution of seagrass and its population recruitment. We also analyzed the major threats to this large seagrass bed. Results showed that a large Z. marina bed with an area of 694.36 ha occurred in this area of the Bohai Sea, with a peripheral area of ~25 km². Seagrass canopy height and plant coverage had a significant correlation with water depth. Asexual reproduction principally occurred in autumn and played a dominant role in population recruitment in vegetated areas, where no seedlings successfully colonized. In contrast, a considerable number of seedlings survived in the seagrass meadow gaps, and thus played a critical role in the recruitment in these areas. The maximum reproductive shoot densities were about 100 and 70 shoots m⁻² at sampling site (S)-1 and S-2 in 2018, respectively, which was about two times more than in 2019 (50 and 20 reproductive shoots m⁻² at S-1 and S-2, respectively). The potential seed output per unit area in 2019 was about 1020 seeds m⁻² at S-1 and 830 seeds m⁻² at S-2, and the seed output in the study area was at a low level compared with global values. Overall, high spring and summer water temperature appeared to induce sexual reproduction of Z. marina in the study area, including reproductive effort, reproductive investment, and seedling development. Furthermore, eelgrass height, aboveground biomass, and density were significantly related to water temperature. Among the potential threatening factors to seagrass in this area, the activities of clam harvesting were intense with daily clam catches >2000 kg, leading to patchy seagrass meadows, especially in the fringe areas. The seagrass bed was also threatened by marine pollution (nutrient loading) and land reclamation. Therefore, the protection and restoration of this seagrass bed are strongly recommended. Our study will provide fundamental information for the conservation and management strategies of large eelgrass beds in the Bohai Sea.

Here, I contribute new insight into why excess seawater nutrients are an increasingly identified feature at reef locations that have low resistance to thermal stress. Specifically, I link this unfavourable synergism to the development of enlarged (suboptimal) zooxanthellae densities that paradoxically limit the capacity of the host coral to build tissue energy reserves needed to combat periods of stress. I explain how both theoretical predictions and field observations support the existence of species-specific ‘optimal’ zooxanthellae densities ~1.0–3.0×10⁶ cellscm−². For the central Great Barrier Reef (GBR), excess seawater nutrients that permit enlarged zooxanthellae densities beyond this optimum range are linked with seawater chlorophyll a>0.45μg·L⁻¹; a eutrophication threshold previously shown to correlate with a significant loss in species for hard corals and phototrophic octocorals on the central GBR, and herein shown to correlate with enhanced bleaching sensitivity during the 1998 and 2002 mass bleaching events.

Pulau Redang and Pulau Tioman have experienced huge tourism growth over the last two decades, but minimal sewage treatment may threaten the resilience of their coral reefs. This study uses stable isotope techniques to identify suitable bioindicators of sewage nutrients (δ¹⁵N) at these islands by measuring macroalgae (Lobophora spp.), gastropods (Drupella spp.), scleractinian coral (Acropora spp.), and leather coral (Sinularia spp.). At tourist hubs using seepage septic tank systems, enrichment of Acropora δ¹⁵N (Redang, +0.7‰) and Sinularia δ¹⁵N (Tioman, +0.4‰) compared to pristine background levels indicate enhanced sewage nutrient discharge. Carbon isotopes and survey data suggest that sedimentation did not confound these δ¹⁵N trends. Potential damaging effects of sewage discharge on the coral reef communities at both islands are highlighted by strong correlations between Acropora δ¹⁵N and regional variation in coral reef community structure, and exclusive occurrence of degraded reefs at regions of high sewage influence.

Comparing sea otter recovery in California (CA) and British Columbia (BC) reveals key ecosystem properties that shape top-down effects in seagrass communities. We review potential ecosystem drivers of sea otter foraging in CA and BC seagrass beds, including the role of coastline complexity and environmental stress on sea otter effects. In BC, we find greater species richness across seagrass trophic assemblages. Furthermore, Cancer spp. crabs, an important link in the seagrass trophic cascade observed in CA, are less common. Additionally, the more recent reintroduction of sea otters, more complex coastline, and reduced environmental stress in BC seagrass habitats supports the hypotheses that sea otter foraging pressure is currently reduced there. In order to manage the ecosystem features that lead to regional differences in top predator effects in seagrass communities, we review our findings, their spatial and temporal constraints, and present a social-ecological framework for future research.

Global shipping is economically important, but has many adverse environmental effects. Anchoring contributes greatly to this adverse impact, as it is responsible for mechanical disturbance of highly sensitive marine habitats. Recovery of these ecosystems is limited by slow regrowth. Anchoring pressure on coastal seabed habitats was estimated using AIS (Automatic Identification System) data along 1800km of Mediterranean coastline between 2010 and 2015. A comparison with field observations showed that these results were most consistent for large boats (>50m). An analysis of AIS data coupled with a seabed map showed that around 30% of the habitats between 0 and −80m exhibited anchoring pressure. Posidonia oceanica seagrass beds were the most impacted habitat in terms of duration. This methodology efficiently estimates spatial and temporal anchoring pressure principally due to large boats and should interest managers of marine protected areas as much as coastline managers.

A spatial risk assessment model is developed for the Great Barrier Reef (GBR, Australia) that helps identify reef locations at higher or lower risk of coral bleaching in summer heat-wave conditions. The model confirms the considerable benefit of discriminating nutrient-enriched areas that contain corals with enlarged (suboptimal) symbiont densities for the purpose of identifying bleaching-sensitive reef locations. The benefit of the new system-level understanding is showcased in terms of: (i) improving early-warning forecasts of summer bleaching risk, (ii) explaining historical bleaching patterns, (iii) testing the bleaching-resistant quality of the current marine protected area (MPA) network (iv) identifying routinely monitored coral health attributes, such as the tissue energy reserves and skeletal growth characteristics (viz. density and extension rates) that correlate with bleaching resistant reef locations, and (v) targeting region-specific water quality improvement strategies that may increase reef-scale coral health and bleaching resistance.

Marked shifts in the composition of coral assemblages are occurring at many locations, but it is unknown whether these are permanent shifts reinforced by patterns of population replenishment. This study examined the composition of juvenile coral assemblages across the United Arab Emirates (UAE). Densities of juvenile corals varied significantly among locations, but were highest where coral cover was highest. Juvenile coral assemblages within the Persian Gulf were dominated by Porites, while no Acropora were recorded. We expect therefore, continued declines in Acropora abundance, while observed dominance of Porites is likely to persist. In the Oman Sea, Pocillopora was the dominant juvenile coral, with Acropora and Stylophora also recorded. This study shows that taxonomic differences in replenishment are reinforcing temporal shifts in coral composition within the southern Persian Gulf, but not in the Oman Sea. Differences in environmental conditions and disturbance regimes likely explain the divergent responses between regions.