خيارات البحث
النتائج 1381 - 1390 من 5,132
Incidence of hydrological, chemical, and physical constraints on bacterial pathogens, Nocardia cells, and fecal indicator bacteria trapped in an urban stormwater detention basin in Chassieu, France
2018
Bernardin-Souibgui, Claire | Barraud, Sylvie | Bourgeois, Emilie | Aubin, Jean-Baptiste | Becouze-Lareure, Céline | Wiest, Laure | Marjolet, Laurence | Colinon, Céline | Lipeme Kouyi, Ghislain | Cournoyer, Benoit | Blaha, Didier | Laboratoire d'Ecologie Microbienne - UMR 5557 (LEM) ; Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Ecole Nationale Vétérinaire de Lyon (ENVL)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS) | Déchets Eaux Environnement Pollutions (DEEP) ; Institut National des Sciences Appliquées de Lyon (INSA Lyon) ; Université de Lyon-Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA) | ISA-TRACES - Technologie et Recherche en Analyse Chimique pour l'Environnement et la Santé ; Institut des Sciences Analytiques (ISA) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS) | Labex IMU (Project IMU-MIC); Labex IMU (Project IMU-Patho-Air); PEPS-CNRS (Patho-BRD); ANR CABRRES; Grand Lyon Metropolis; Rhone-Mediterranean-Corsica Water Agency | ANR-11-CESA-0012,CABRRES,CAractérisation chimique, microbiologique, écotoxicologique et spatio-temporelle des contaminants des Bassins de Retenue des eaux pluviales urbaines : évaluation et gestion des Risques Environnementaux et Sanitaires associés(2011)
International audience | The nature and fate of urban contaminants washed by stormwater events and accumulating in a detention basin (DB) were investigated. Relations between bacterial and chemical contaminants of trapped urban sediments, and field parameters were analyzed. Fecal indicators and some pathogens known to be environmentally transmitted (Nocardia, Pseudomonas aeruginosa, and Aeromonas caviae) were tracked, and their persistence investigated. Six sampling campaigns were carried out over 3 years, using five sites including a settling chamber (SC). Aerosolized bacteria at these sites were also monitored. Deposits in the basin were made of fine particles and their content in chemical pollutants was found highly variable. High polycyclic aromatic hydrocarbon (PAH) contents were measured but only three pesticides, over 22, were detected. Deposits were significantly contaminated by fecal indicator bacteria (FIB), P. aeruginosa, A. caviae, and by Nocardia. Only A. caviae showed significant numbers in aerosolized particles recovered over the detention basin. Nocardia spp. cells heavily contaminated the SC. The efficacy of the detention basin at reducing bacterial counts per rain event and over time were estimated. A slight drop in the counts was monitored for fecal indicators but not for the other bacterial groups. Hydrodynamic parameters had a strong impact on the distribution and features of the deposits. Multiple factors impacted the fate of FIB, P. aeruginosa, A. caviae, and Nocardia cells, but in a group dependent manner. Nocardia counts were found positively correlated with volatile organic matter. FIB appeared highly efficient colonizers of the DB.
اظهر المزيد [+] اقل [-]Biochem-Env: a platform of biochemistry for research in environmental and agricultural sciences
2018
Cheviron, Nathalie | Grondin, Virginie | Mougin, Christian | Ecologie fonctionnelle et écotoxicologie des agroécosystèmes (ECOSYS) ; Institut National de la Recherche Agronomique (INRA)-AgroParisTech | Plateforme BIOCHEM-ENV ; Institut National de la Recherche Agronomique (INRA)
Biochemical indicators are potent tools to assess ecosystem functioning under anthropic and global pressures. Nevertheless, additional work is needed to improve the methods used for the measurement of these indicators, and for a more relevant interpretation of the obtained results. To face these challenges, the platform Biochem-Env aims at providing innovative and standardized measurement protocols, as well as database and information system favoring result interpretation and opening. Its skills and tools are also offered for expertise, consulting, training, and standardization. In addition, the platform is a service of a French Research Infrastructure for Analysis and Experimentation on Ecosystems, for research in environmental and agricultural sciences.
اظهر المزيد [+] اقل [-]Pesticide residue profiles in bee bread and pollen samples and the survival of honeybee colonies: a case study from Luxembourg
2018
Beyer, M. | Lenouvel, A. | Guignard, C. | Eickermann, M. | Clermont, Antoine | Kraus, F. | Hoffmann, - | ENVIRONMENTAL RESEARCH AND INNOVATION DEPARTMENT LUX ; Partenaires IRSTEA ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA) | Information – Technologies – Analyse Environnementale – Procédés Agricoles (UMR ITAP) ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro) | ADMINISTRATION DES SERVICES TECHNIQUES DE L'AGRICULTURE LUXEMBOURG LUX ; Partenaires IRSTEA ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)
[Departement_IRSTEA]Ecotechnologies [TR1_IRSTEA]INSPIRE [ADD1_IRSTEA]Équiper l'agriculture | International audience | Pesticide residues (112 compounds) were quantified by GC-MS/MS or LC-MS/MS in 85 bee bread samples and 154 pollen samples obtained from five apiaries each with three or four colonies (genotype Buckfast) in Luxembourg over the period 2011-2013. Thiacloprid, chlorfenvinphos, tebuconazole, and methiocarb were found most frequently in bee bread while thiacloprid, permethrin-cis, and permethrin-trans were detected most frequently in the pollen samples. Three neonicotinoid insecticides (clothianidin, imidacloprid, and thiamethoxam) that were restricted by an EU regulation in 2013 after our sampling campaign was finished were each found in less than 8% of the pollen or bee bread samples. The maximum concentrations of thiacloprid, metazachlor, and methiocarb measured in the pollen collected by a group of honeybee colonies (n=5) without survivors within the 3-year period of observation were 86.20 +/- 10.74ng/g, 2.80 +/- 1.26ng/g, and below the limit of quantification, respectively. The maximum concentrations of the same compounds measured in the pollen collected by a group of honeybee colonies with significantly (P=0.02) more survivors (7 out of 9) than expected, if the survivors had been distributed randomly among the groups of colonies, were 11.98 +/- 2.28ng/g, 0.44 +/- 0.29ng/g, and 8.49 +/- 4.13ng/g, respectively. No honeybee colony that gathered pollen containing more than 23ng/g thiacloprid survived the 3-year project period. There was no statistically significant association between pesticide residues in the bee bread and the survival of the colonies. Actions already taken or planned and potential further actions to protect bees from exposure to pesticides are discussed.
اظهر المزيد [+] اقل [-]Large-scale geographic patterns of mercury contamination in Morocco revealed by freshwater turtles
2018
Slimani, Tahar | El Hassani, Mohamed Said | El Mouden, El Hassan | Bonnet, Marine | Bustamante, Paco | Brischoux, Francois | Brault-Favrou, Maud | Bonnet, Xavier | Faculté des Sciences Semlalia [Marrakech] ; Université Cadi Ayyad [Marrakech] (UCA) | Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) ; Institut National de la Recherche Agronomique (INRA)-La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS) | LIttoral ENvironnement et Sociétés (LIENSs) ; Institut national des sciences de l'Univers (INSU - CNRS)-La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS)
International audience | Mercury (Hg) is a toxic contaminant present in most aquatic ecosystems. High concentrations pose serious threats to organisms and to human health. Because previous studies focused on few countries, environmental hazard due to Hg contamination remains obscure in many geographic areas, and for example limited information is available in North Africa. We examined total Hg contamination in 13 sites in Morocco (12 rivers and one lake) spread over a large area, 400 km north–south and 350 km west–east, that encompasses different biogeographic zones separated by the Atlas Mountains. Due to their longevity and sedentary habits, we used freshwater turtles as biological probes to monitor Hg exposure. Keratinized tissues reflect long-term Hg exposure; thus, we assayed Hg concentration in the claws of > 200 individuals and supplemented these data with blood Hg concentrations of > 60 individuals (a tissue that provides shorter term Hg exposure integration). The results provide the first large-scale picture of Hg contamination in the aquatic freshwater systems of Morocco. Comparisons with previous studies revealed that some of the sites were highly contaminated (e.g. mean Hg concentrations were above 5 μg g⁻¹, a very high level in keratinized tissues) whereas other sites presented moderate or baseline levels. Unexpectedly, all highly contaminated sites were found in less densely populated areas, while more densely urbanized northern sites, even the sewers of large cities, were not highly contaminated. We hypothesize that silver mining activities in the southern High Atlas and in the Anti-Atlas contaminate rivers of the catchment basins over long distances. These findings indicate that fish, water consumption and contamination levels in local people should be further scrutinized.
اظهر المزيد [+] اقل [-]Removal of two anionic reactive textile dyes by adsorption into MgAl-layered double hydroxide in aqueous solutions
2018
Boubakri, Saber | Djebbi, Mohamed Amine | Bouaziz, Zaineb | Namour, Philippe | Jaffrezic-Renault, Nicole | Amara, Abdesslem Ben Haj | Trabelsi-Ayadi, Malika | Ghorbel-Abid, Ibtissem | Kalfat, Rafik | Laboratoire des Applications de la Chimie aux Ressources et Substances Naturelles et à l'Environnement ; Université de Carthage (Tunisie) (UCAR) | Lab Mat Traitement & Anal ; Inst Natl Rech & Anal Physicochim | Institut National de Recherche et d'Analyse Physico-Chimique (INRAP) | Lab Phys Mat Lamellaires & Nanomat Hybrides (PMLNM) ; Université de Carthage (Tunisie) (UCAR) | ISA-Interfaces & biosensors - Interfaces & biocapteurs ; Institut des Sciences Analytiques (ISA) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS) | RiverLy (UR Riverly) ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA) | Département de chimie (LPCM) ; Faculté des Sciences de Bizerte [Université de Carthage] ; Université de Carthage (Tunisie) (UCAR)-Université de Carthage (Tunisie) (UCAR) | Laboratoire de recherche Méthodes et Techniques d'Analyses [Ariana] (LMTA) ; Institut National de Recherche et d'Analyse Physico-chimique [Ariana, Tunisie] (INRAP)
[Departement_IRSTEA]Eaux [TR1_IRSTEA]BELCA [TR2_IRSTEA]ARCEAU | International audience | extile dyes pose a significant challenge for water pollution due to the poor degradability of their complex aromatic structures (e.g., RR-120 and RBB-150). In order to minimize the harmful effects of RR-120 and RBB-150, the capacity of MgAl-layered double hydroxide for removing of these contaminants was studied herein. Batch adsorption experiments were conducted to investigate the effect of various operating parameters, such as solution pH, contact time, dye concentration, and temperature in order to provide optimal conditions for removal. Structural and morphological analyses were used to highlight the assembly and/or interaction LDH-dye. The state of equilibrium of RR-120 and RBB-150 adsorption was pH- and temperature-dependent and followed the pseudo-second-order rate model. Also, the equilibrium adsorption data of both dyes were found to adopt the Langmuir type isotherm model, which assumes a monolayer arrangement in LDH-dye. Furthermore, the effects of four major coexisting and competing mono- and divalent interlayer anions, such as NO3-, Cl-, CO32-, and SO42-, on the uptakes of RR-120 and RBB-150 were studied and the results showed that NO3- anions had insignificant effect on the uptakes of RR-120 and RBB-150 by MgAl. An equivalent study on the presence of both dyes in competitive trial adsorption/desorption from binary aqueous solution was investigated. And finally, the reuse operation of recovered material after dye adsorption was tested in up to 5 cycles of recyclability.
اظهر المزيد [+] اقل [-]Biological impacts of local vs. regional land use on a small tributary of the Seine River (France): insights from a food web approach based on stable isotopes
2018
Hette-Tronquart, N. | Oberdorff, T. | Tales, E. | Zahm, Amandine | Belliard, J. | Hydrosystèmes et Bioprocédés (UR HBAN) ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)
[Departement_IRSTEA]Eaux [TR1_IRSTEA]QUASARE [ADD1_IRSTEA]Dynamique et fonctionnement des écosystèmes | International audience | As part of the landscape, streams are influenced byland use. Here, we contributed to the understanding of the biological impacts of land use on streams, investigating how landscape effects vary with spatial scales (local vs. regional). We adopted a food web approach integrating both biological structure and functioning, to focus on the overall effect of land use on stream biocoenosis. We selected 17 sites of a small tributary of the Seine River (France) for their contrasted land use, and conducted a natural experiment by sampling three organic matter sources, three macroinvertebrate taxa, and most of the fish community. Using stable isotope analysis, we calculated three food web metrics evaluating two major dimensions of the trophic diversity displayed by the fish community: (i) the diversity of exploited resources and (ii) the trophic level richness. The idea was to examine whether (1) land-use effects varied according to spatial scales, (2) land use affected food webs through an effect on community structure and (3) land use affected food webs through an effect onavailable resources. Beside an increase in trophic diversity from upstream to downstream, our empirical data showed that food webs were influenced by land use in the riparian corridors (local scale). The effect was complex, and depended on site's position along the upstream-downstream gradient. By contrast, land use in the catchment (regional scale) did not influence stream biocoenosis. At the local scale, community structure was weakly influenced by land use, and thus played a minor role in explaining food web modifications. Our results suggested that the amount of available resources at the base of the food web was partly responsible for food web modifications. In addition, changes in biological functioning (i.e. feeding interactions) can also explain another part of the land-use effect. These results highlight the role played by the riparian corridors as a buffer zone, and advocate that riparian corridor should be at the centre of water management attention.
اظهر المزيد [+] اقل [-]Antifungal activity of essential oils on two Venturia inaequalis strains with different sensitivities to tebuconazole
2018
Muchembled, Jérôme | Deweer, Caroline | Sahmer, Karin | Halama, Patrice | Institut Charles Viollette (ICV) - ULR 7394 (ICV) ; Université d'Artois (UA)-Université du Littoral Côte d'Opale (ULCO)-Institut Supérieur d'Agriculture-Université de Lille-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | SFR Condorcet ; Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 (LGCgE) ; Université d'Artois (UA)-Université de Lille-Ecole nationale supérieure Mines-Télécom Lille Douai (IMT Lille Douai) ; Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-JUNIA (JUNIA) ; Université catholique de Lille (UCL)-Université catholique de Lille (UCL)
International audience | The antifungal activity of seven essential oils (eucalyptus, clove, mint, oregano, savory, tea tree, and thyme) was studied on Venturia inaequalis, the fungus responsible for apple scab. The composition of the essential oils was checked by gas chromatography-mass spectrometry. Each essential oil had its main compound. Liquid tests were performed to calculate the IC50 of essential oils as well as their majority compounds. The tests were made on two strains with different sensitivities to tebuconazole: S755, the sensitive strain, and rs552, the strain with reduced sensitivity. Copper sulfate was selected as the reference mineral fungicidal substance. IC50 with confidence intervals were calculated after three independent experiments. The results showed that all essential oils and all major compounds had in vitro antifungal activities. Moreover, it was highlighted that the effectiveness of four essential oils (clove, eucalyptus, mint, and savory) was higher than copper sulfate on both strains. For each strain, the best activity was obtained using clove and eucalyptus essential oils. For clove, the IC50 obtained on the sensitive strain (5.2 mg/L [4.0–6.7 mg/L]) was statistically lower than the IC50 of reduced sensitivity strain (14 mg/L [11.1–17.5 mg/L]). In contrast, for eucalyptus essential oil, the IC50 were not different with respectively 9.4–13.0 and 12.2–17.9 mg/L for S755 and rs552 strains. For mint, origano, savory, tea tree, and thyme, IC50 were always the best on rs552 strain. The majority compounds were not necessarily more efficient than their corresponding oils; only eugenol (for clove) and carvacrol (for oregano and savory) seemed to be more effective on S755 strain. On the other hand, rs552 strain seemed to be more sensitive to essential oils than S755 strain. In overall, it was shown that essential oils have different antifungal activities but do not have the same antifungal activities depending on the fungus strain used.
اظهر المزيد [+] اقل [-]Exploiting rhizosphere microbial cooperation for developing sustainable agriculture strategies
2018
Besset-Manzoni, Yoann | Rieusset, Laura | Joly, Pierre | Comte, Gilles | Prigent-Combaret, Claire | Laboratoire d'Ecologie Microbienne - UMR 5557 (LEM) ; Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Ecole Nationale Vétérinaire de Lyon (ENVL)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire d'Ecologie des Hydrosystèmes Fluviaux (EHF) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS) | ANR-12-JSV7-0014,SymbioMaize,Diversification du maïs et symbiose associative avec la rhizobactérie Pseudomonas fluorescens(2012)
International audience
اظهر المزيد [+] اقل [-]Evaluation of psychiatric hospital wastewater toxicity: what is its impact on aquatic organisms?
2018
Mazzitelli, Jean-Yves | Budzinski, Hélène | Cachot, Jérôme | Geffard, Olivier | Marty, Pierre | Chiffre, Axelle | François, Adeline | Bonnafé, Elsa | Geret, Florence | Biochimie et Toxicologie des Substances Bioactives (BTSB) ; Institut national universitaire Champollion (INUC) ; Université de Toulouse (UT)-Université de Toulouse (UT) | Laboratoire de Physico et Toxico-Chimie des systèmes naturels (LPTC) ; Université Sciences et Technologies - Bordeaux 1 (UB)-Centre National de la Recherche Scientifique (CNRS) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; Observatoire aquitain des sciences de l'univers (OASU) ; Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) | Milieux aquatiques, écologie et pollutions (UR MALY) ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA) | Laboratoire de Parasitologie-Mycologie, Nice ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre Hospitalier Universitaire de Nice (CHU Nice)-Université Côte d'Azur (UniCA) | Laboratoire Chrono-environnement (UMR 6249) (LCE) ; Centre National de la Recherche Scientifique (CNRS)-Université de Franche-Comté (UFC) ; Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC) | Géographie de l'environnement (GEODE) ; Université Toulouse - Jean Jaurès (UT2J) ; Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS) | This work was supported by ANSES, the Adour-Garonne Water Agency, and the Midi-Pyrénées region.
[Departement_IRSTEA]Eaux [TR1_IRSTEA]BELCA [ADD1_IRSTEA]Systèmes aquatiques soumis à des pressions multiples <br/>[Departement_IRSTEA]Eaux [TR1_IRSTEA]BELCA [ADD1_IRSTEA]Systèmes aquatiques soumis à des pressions multiples | International audience | The primary source of pharmaceuticals to the aquatic environment is the discharge of wastewater effluents. Pharmaceuticals are a large and diverse group of compounds. Among them, psychotropic substances are particularly interesting to study due to their specific known mode of action. The present study was performed to investigate the effects of wastewater effluents from a psychiatric hospital wastewater treatment plant (WWTP) on several aquatic organisms. All the analyzed pharmaceuticals (10 compounds) were detected in WWTP effluents as well as in the receiving river. Although the environmental concentrations were generally at trace levels (ng L-1 to μg L-1), induce toxic effects were observed. This study showed the effects of the WWTP effluents on the oogenesis and/or embryogenesis of amphipod crustacean Gammarus fossarum, Japanese fish medaka Oryzias latipes, mollusk Radix peregra, and planarian Schmidtea polychroa. A decrease of the number of oocytes and produced embryos was observed for G. fossarum and S. polychroa. Similarly, the hatching rate of R. peregra was affected by effluents. In the receiving river, the macroinvertebrate community was affected by the wastewater effluents discharge.
اظهر المزيد [+] اقل [-]Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program
2018
Lefrancois, Estelle | Apothéloz-Perret-Gentil, Laure | Blancher, Philippe | Botreau, Samuel | Chardon, Cécile | Crepin, Laura | Cordier, Tristan | Cordonier, Arielle | Domaizon, Isabelle | Ferrari, Benoit | Guéguen, Julie | Hustache, Jean-Christophe | Jacas, Louis | Jacquet, Stéphan | Lacroix, Sonia | Mazenq, Anne-Laurence | Pawlowska, Alina | Perney, Pascal | Pawlowski, Jan | Rimet, Frédéric | Rubin, Jean-François | Trevisan, Dominique | Vivien, Régis | Bouchez, Agnes | Centre Alpin de Recherche sur les Réseaux Trophiques et Ecosystèmes Limniques (CARRTEL) ; Institut National de la Recherche Agronomique (INRA)-Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry]) | Département de Génétique et Evolution ; Université de Genève = University of Geneva (UNIGE) | Independent | Asters Conservatoire des Espaces Naturels de Haute-Savoie | Service cantonal de l'écologie de l'eau | Adaptation et diversité en milieu marin (AD2M) ; Station biologique de Roscoff [Roscoff] (SBR) ; Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) | ID-GENE Ecodiagnostics | Department of genetics and evolution ; Université de Genève = University of Geneva (UNIGE) | Ecole d'ingénieurs HES ; HES | Swiss Federal Institute of Aquatic Science and Technology [Dübendorf] (EAWAG) | European Cross-Border Cooperation Program (Interreg France-Switzerland); Swiss cantons (Valais, Geneva, Vaud); European (European Regional Development Fund)
International audience | The effectiveness of environmental protection measures is based on the early identification and diagnosis of anthropogenic pressures. Similarly, restoration actions require precise monitoring of changes in the ecological quality of ecosystems, in order to highlight their effectiveness. Monitoring the ecological quality relies on bioindicators, which are organisms revealing the pressures exerted on the environment through the composition of their communities. Their implementation, based on the morphological identification of species, is expensive because it requires time and experts in taxonomy. Recent genomic tools should provide access to reliable and high-throughput environmental monitoring by directly inferring the composition of bioindicators' communities from their DNA (metabarcoding). The French-Swiss program SYNAQUA (INTERREG France-Switzerland 2017-2019) proposes to use and validate the tools of environmental genomic for biomonitoring and aims ultimately at their implementation in the regulatory bio-surveillance. SYNAQUA will test the metabarcoding approach focusing on two bioindicators, diatoms, and aquatic oligochaetes, which are used in freshwater biomonitoring in France and Switzerland. To go towards the renewal of current biomonitoring practices, SYNAQUA will (1) bring together different actors: scientists, environmental managers, consulting firms, and biotechnological companies, (2) apply this approach on a large scale to demonstrate its relevance, (3) propose robust and reliable tools, and (4) raise public awareness and train the various actors likely to use these new tools. Biomonitoring approaches based on such environmental genomic tools should address the European need for reliable, higher-throughput monitoring to improve the protection of aquatic environments under multiple pressures, guide their restoration , and follow their evolution.
اظهر المزيد [+] اقل [-]