The ancient Zloty Stok (SW Poland) gold mine is such an environment, where different microbial communities, able to utilize inorganic arsenic species As(III) and As(V), are found. The purpose of the present study was to (i) estimate prokaryotic diversity in the microbial mats in bottom sediments of this gold mine, (ii) identify microorganisms that can metabolize arsenic, and (iii) estimate their potential role in the arsenic geochemistry of the mine and in the environment. The oxidation/reduction experiments showed that the microbial mat community may significantly contribute to arsenic contamination in groundwater. The presence of both arsenite oxidizing and dissimilatory arsenate reducing bacteria in the mat was confirmed by the detection of arsenite oxidase and dissimilatory arsenate reductase genes, respectively. This work also demonstrated that microorganisms utilizing other compounds that naturally co-occur with arsenic are present within the microbial mat community and may contribute to the arsenic geochemistry in the environment.

This review paper concentrates on carbon dioxide emissions, discussing its agricultural sources and the possibilities for minimizing emissions from these sources in wheat production in Canterbury, New Zealand. This study was conducted over 35,300 ha of irrigated and dryland wheat fields in Canterbury. Total CO₂ emissions were 1032 kg CO₂/ha in wheat production. Around 52% of the total CO₂ emissions were released from fertilizer use and around 20% were released from fuel used in wheat production. Nitrogen fertilizers were responsible for 48% (499 kg CO₂/ha) of CO₂ emissions. The link between nitrogen consumption, CO₂ emissions and crop production showed that reducing the CO₂ emissions would decrease crop production and net financial benefits to farmers.

The present study tests the effect of antiparasitic compound ivermectin in a constructed food-web system, a soil multi-species (SMS) higher tier test system. Mutualism, competition and predation within the SMS system were introduced by the addition of five collembolan species, one enchytraeid and a predatory mite species. Bait lamina sticks were incorporated as a measure of functional toxicity, attempting to the integrated feeding activity of the invertebrates. The study showed that on the community level all treatments were significantly affecting the community abundance and composition and that the decrease in abundance corresponded well with increasing exposure concentration for all species. Since all concentrations had significant adverse effect on the community structure, the community-based no-effect-concentration is below the lowest test concentration of 0.25 mg kg⁻¹, whereas the EC10 for the individual species were as low as 0.05 mg kg⁻¹. The bait lamina respond was only affected at the highest exposure concentration.

Viticulturists use copper fungicide to combat Downy Mildew. Copper, a non-degradable heavy metal, can accumulate in soil or leach into water sources. Its accumulation in topsoil has impacted micro and macro organisms, spurring scientists to research in situ copper removal methods. Recent publications suggest that microorganism assisted phytoextraction, using plants and bacteria to actively extract copper, is most promising. As vineyards represent moderately polluted sites this technique has great potential. Active plant extraction and chelate assisted remediation extract too little copper or risk leaching, respectively. However, despite interesting pot experiment results using microorganism assisted phytoextraction, it remains a challenge to find plants that primarily accumulate copper in their shoots, a necessity in vineyards where whole plant removal would be time consuming and financially cumbersome. Vineyard remediation requires a holistic approach including sustainable soil management, proper plant selection, increasing biodiversity and microorganisms.

The present study examines the effect of carboxyl-CdSe/ZnS quantum dots (QDs) on Cu and Pb availability to microalgae with different cell wall characteristics: Chlorella kesslerii possessing a cellulosic cell wall and two strains of Chlamydomonas reinhardtii, a wall-less and a walled strain containing glycoproteins as the main cell wall component. Results demonstrated that QDs decreased Pb and Cu intracellular contents ({Cu}ᵢₙₜ and {Pb}ᵢₙₜ) in walled strains by a factor of 2.5 and 2, respectively, as expected by the decrease of about 70% and 40% in the dissolved Cu and Pb concentrations. QDs increased {Cu}ᵢₙₜ and {Pb}ᵢₙₜ in wall-less strain by a factor of 4 and 3.5. These observations were consistent with the observed association of QDs to the wall-less C. reinhardtii, and lack of association to walled algal strains. Suwannee River humic acid did not influence metal association to QDs, but decreased {Cu}ᵢₙₜ and {Pb}ᵢₙₜ in all microalgae.

Larval zebrafish (Danio rerio) were exposed (96 h) to selective serotonin reuptake inhibitors (SSRIs) fluoxetine and sertraline and changes in transcriptomes analyzed by Affymetrix GeneChip® Zebrafish Array were evaluated to enhance understanding of biochemical pathways and differences between these SSRIs. The number of genes differentially expressed after fluoxetine exposure was 288 at 25μg/L and 131 at 250μg/L; and after sertraline exposure was 33 at 25μg/L and 52 at 250μg/L. Same five genes were differentially regulated in both SSRIs indicating shared molecular pathways. Among these, the gene coding for FK506 binding protein 5, annotated to stress response regulation, was highly down-regulated in all treatments (results confirmed by qRT-PCR). Gene ontology analysis indicated at the gene expression level that regulation of stress response and cholinesterase activities were influenced by these SSRIs, and suggested that changes in transcription of these genes could be used as biomarkers of SSRI exposure.

To validate the outcome of the national regulation on dioxins emission implemented in 1999, this study investigated temporal trends of chlorinated dioxins and related compounds (DRCs) in liver of common cormorants (Phalacrocorax carbo) collected from Lake Biwa, Japan between 2001 and 2008, as a part of the “Survey on the State of Dioxins Accumulation in Wildlife” conducted by the Ministry of the Environment, Japan. We also measured a biomarker of DRCs exposure, the cytochrome P450 1A (CYP1A)-dependent O-dealkylation activity of alkoxyresorufins (AROD), including methoxy-, ethoxy-, pentoxy- and benzyloxy-resorufins in the samples over 2001–2007. Neither TEQ nor AROD activity showed any clear declining trend over the time period, although the emission of DRCs during the corresponding period was estimated to be apparently decreasing. Our data indicate that the concentration of recalcitrant DRCs in the cormorant during 2001–2008 was scarcely affected by the national regulation on dioxins emission.

The role of indigenous and non-indigenous arbuscular mycorrhizal fungi (AMF) on As uptake by Plantago lanceolata L. growing on substrate originating from mine waste rich in As was assessed in a pot experiment. P. lanceolata inoculated with AMF had higher shoot and root biomass and lower concentrations of As in roots than the non-inoculated plants. There were significant differences in As concentration and uptake between different AMF isolates. Inoculation with the indigenous isolate resulted in increased transfer of As from roots to shoots; AMF from non-polluted area apparently restricted plants from absorbing As to the tissue; and plants inoculated with an AMF isolate from Zn–Pb waste showed strong As retainment within the roots. Staining with dithizone indicated that AMF might be actively involved in As accumulation. The mycorrhizal colonization affected also the concentration of Cd and Zn in roots and Pb concentration, both in shoots and roots.

Lead contamination of urban residential soils is a public health concern. Consequently, there is a need to delineate hotspots in the landscape to identify risk and facilitate remediation. Land use is a good predictor of some environmental pollutants. However, in the case of soil lead, research has shown that land use is not a useful proxy. We hypothesize that soil lead is related to both individual landscape features at the parcel scale and the landscape context in which parcels are embedded. We sampled soil lead on 61 residential parcels in Baltimore, Maryland using field-portable x-ray fluorescence. Thirty percent of parcels had average lead concentrations that exceeded the USEPA limit of 400 ppm and 53% had at least one reading that exceeded 400 ppm. Results indicate that soil lead is strongly associated with housing age, distance to roadways, and on a parcel scale, distance to built structures.

The primary objective of this study was to determine whether tree swallows (Tachycineta bicolor) demonstrate similar responses to lake pH and mercury (Hg) contamination in northern Wisconsin as do common loons (Gavia immer). Similar to common loons, Hg concentrations in the blood of tree swallow nestlings were higher, Hg concentrations in eggs tended to be higher, and egg size tended to be smaller at low (<6.2) pH lakes. In contrast to common loons, tree swallow nestling production was not lower at low pH lakes. Based on modeling associations, Hg concentrations in tree swallow eggs and nestling blood can be used to predict Hg concentrations in common loons without the invasive or destructive sampling of loons. Mean concentrations of cadmium, manganese, and mercury in nestling livers were higher at low pH lakes than neutral pH lakes. Concentrations of cadmium, chromium, mercury, selenium, and zinc were not at toxic levels.