Some Acinetobacter species have emerged as very important opportunistic pathogens in humans. We investigated Acinetobacter spp. from the polluted urban riverine environment in Croatia in regard to species affiliation, antibiotic resistance pattern, and resistance mechanisms. Considerable number of isolates produced acquired extended-spectrum β-lactamase(s) (ESBLs), CTX-M-15 solely or with TEM-116. By Southern blot hybridization, bla TEM₋₁₁₆ was identified on plasmids ca. 10, 3, and 1.2 kb in Acinetobacter junii, A. gandensis, and A. johnsonii. The bla TEM₋₁₁₆-carrying plasmid in A. gandensis was successfully transferred by conjugation to azide-resistant Escherichia coli J53. A. radioresistens isolate also carried an intrinsic carbapenemase gene bla OXA₋₁₃₃ with ISAba1 insertion sequence present upstream to promote its expression. Majority of ESBL-producing isolates harbored integrases intI1 and/or intI2 and the sulfamethoxazole resistance gene sul1. Almost all isolates had overexpressed resistance-nodulation-cell division (RND) efflux system, indicating that this mechanism may have contributed to multidrug resistance phenotypes. This is the first report of environmental CTX-M-15-producing Acinetobacter spp. and the first identification of CTX-M-15 in A. johnsonii, A. junii, A. calcoaceticus, A. gandensis, A. haemolyticus, and A. radioresistens worldwide. We identified, also for the first time, the environmental Acinetobacter-producing TEM ESBLs, highlighting the potential risk for human health, and the role of these bacteria in maintenance and dissemination of clinically important antibiotic resistance genes in community through riverine environments.

This study presents a meta-analysis of 12 experiments that quantify nitrate-N leaching losses from grazed pasture systems in alluvial sedimentary soils in Canterbury (New Zealand). Mean measured nitrate-N leached (kg N/ha × 100 mm drainage) losses were 2.7 when no urine was applied, 8.4 at the urine rate of 300 kg N/ha, 9.8 at 500 kg N/ha, 24.5 at 700 kg N/ha and 51.4 at 1000 kg N/ha. Lismore soils presented significantly higher nitrate-N losses compared to Templeton soils. Moreover, a multiple linear regression (MLR) model was developed to determine the key factors that influence nitrate-N leaching and to predict nitrate-N leaching losses. The MLR analyses was calibrated and validated using 82 average values of nitrate-N leached and 48 explanatory variables representative of nitrogen inputs and outputs, transport, attenuation of nitrogen and farm management practices. The MLR model (R ² = 0.81) showed that nitrate-N leaching losses were greater at higher urine application rates and when there was more drainage from rainfall and irrigation. On the other hand, nitrate leaching decreased when nitrification inhibitors (e.g. dicyandiamide (DCD)) were applied. Predicted nitrate-N leaching losses at the paddock scale were calculated using the MLR equation, and they varied largely depending on the urine application rate and urine patch coverage.

Malachite green (MG), a recalcitrant, carcinogenic, and mutagenic triphenylmethane dye, was decolorized and detoxified using crude manganese peroxidase (MnP) prepared from the white rot fungus Irpex lacteus F17. In this study, the key factors (pH, temperature, MG, Mn²⁺, H₂O₂, MnP) in these processes were investigated. Under optimal conditions, 96 % of 200 mg L⁻¹ of MG was decolorized when 66.32 U L⁻¹ of MnP was added for 1 h. The K ₘ, V ₘₐₓ, and k cₐₜ values were 109.9 μmol L⁻¹, 152.8 μmol L⁻¹ min⁻¹, and 44.5 s⁻¹, respectively. The decolorization of MG by MnP followed first-order reaction kinetics with a kinetic rate constant of 0.0129 h⁻¹. UV–vis and UPLC analysis revealed degradation of MG. Furthermore, seven different intermediates formed during the MnP treatment of 0.5 h were identified by LC-TOF-MS. These degradation products were generated via two different routes by either N-demethylation of MG or the oxidative cleavage of the C–C double bond in MG. Based on ecotoxicity analyses performed on bacteria and algae, it was confirmed that MG metabolites produced by the MnP-catalyzed system were appreciably less toxic than the parent compound. These studies indicate the potential use of this enzyme system in the clean-up of aquatic and terrestrial environments.

An attempt has been made to isolate, purify and characterize antifouling compound from Streptomyces fradiae PE7 isolated from Vellar estuarine sediment, Parangipettai, South India. The microbial identification was done at species level based on its phenotypic, cell wall and molecular characteristics. Strain PE7 produced high quantity of antifouling compounds in agar surface fermentation when compared to submerged fermentation. In fermentation optimization, wide range of sugars, amino acids, minerals, pH, temperature and NaCl concentration was found to influence the antifouling compound production from the strain PE7. Antifouling compound PE7-C was purified from the crude extract by preparative TLC, and its activity against biofouling bacteria was confirmed by bioautography. Based on the physico-chemical characteristics, the chemical structure of the antifouling compound PE7-C was identified as quercetin (C₁₅H₁₀O₇), a flavonoid class of compound with the molecular weight 302.23 g/mol. The purified quercetin was active against 18 biofouling bacteria with MIC range between 1.6 and 25 μg/ml, algal spore germination and mollusc foot adherence found at 100 μg/ml and 306 ± 19.6 μg ml⁻¹ respectively. The present study, for the first time, reported quercetin from marine-derived Streptomyces sp. PE7 with antifouling activity. This also leads to the repurposing of quercetin for the development of antifouling agent.

Excitation-emission matrix (EEM) fluorescence spectroscopy combined with parallel factor analysis (PARAFAC) and multivariable analysis were employed to compare components of dissolved (DOM) and particulate (POM) organic matter and to reveal their correlations with water quality in Baitapuhe River and Xihe River in Shenyang City of northeast China. Eighteen water samples in Baitapuhe River and 16 water samples in Xihe River were collected along a human impact gradient. The DOM concentrations in Baitapuhe River were lower than those in Xihe River, so were the POM concentrations. The DOM in Baitapuhe River mainly derived from livestock wastewater and domestic sewage, which had strong biodegradability. However, the DOM in Xihe River mainly originated from industrial wastewater, which exhibited weak biodegradability. Four PARAFAC components (C1 to C4) were extracted from the DOM and POM. C1 was defined as fulvic-like component, and C2 was assigned as microbial humic component. C3 and C4 were ubiquitous protein-like component, which were referred as tryptophan-like and tyrosine-like components, respectively. The C3 was representative for the DOM in Baitapuhe River. The C3 and C4 were the main fractions of the DOM in Xihe River across the centralized wastewater-discharge region, whereas the C2 was the major component across the dispersed wastewater-discharge region. POM was dominated by the C4 in both rivers. Latent factors of water quality included the DOM, DO, Chl a, NO₃-N, and NH₄-N in Baitapuhe River, but the latent factors contained DOM, DO, BOD₅, and COD in Xihe River. Baitapuhe River was under the aerobic condition, but Xihe River was under the anaerobic condition.

Fluorine determination in airborne samples is important due to its spread into the air from both natural and artificial sources. It can travel by wind over large distances before depositing on the Earth’s surface. Its concentration in various matrices are limited and controlled by the regulations for causing health risks associated with environmental exposures. In this work, fluorine was determined in PM2.5 airborne samples by high-resolution continuum source electrothermal atomic absorption spectrometry. For these purpose, the PM2.5 airborne particulates were collected on quartz filters using high-volume samplers (500 L/min) in Istanbul (Turkey) for 96 h during January to June in 2 years. Then, instrumental and experimental parameters were optimized for the analyte in airborne samples. The validity of the method for the analyte was tested using standard reference material, and certified values were found in the limits of 95 % confidence level. The fluorine concentrations and meteorological conditions were compared statistically.

The rational for the study was to review the literature on the toxicity and corresponding mechanisms associated with lead (Pb), mercury (Hg), cadmium (Cd), and arsenic (As), individually and as mixtures, in the environment. Heavy metals are ubiquitous and generally persist in the environment, enabling them to biomagnify in the food chain. Living systems most often interact with a cocktail of heavy metals in the environment. Heavy metal exposure to biological systems may lead to oxidation stress which may induce DNA damage, protein modification, lipid peroxidation, and others. In this review, the major mechanism associated with toxicities of individual metals was the generation of reactive oxygen species (ROS). Additionally, toxicities were expressed through depletion of glutathione and bonding to sulfhydryl groups of proteins. Interestingly, a metal like Pb becomes toxic to organisms through the depletion of antioxidants while Cd indirectly generates ROS by its ability to replace iron and copper. ROS generated through exposure to arsenic were associated with many modes of action, and heavy metal mixtures were found to have varied effects on organisms. Many models based on concentration addition (CA) and independent action (IA) have been introduced to help predict toxicities and mechanisms associated with metal mixtures. An integrated model which combines CA and IA was further proposed for evaluating toxicities of non-interactive mixtures. In cases where there are molecular interactions, the toxicogenomic approach was used to predict toxicities. The high-throughput toxicogenomics combines studies in genetics, genome-scale expression, cell and tissue expression, metabolite profiling, and bioinformatics.

Polychlorinated biphenyls (PCBs) are a group of 209 individual congeners widely used as industrial chemicals. PCBs are found as by-products in dye and paint manufacture and are legacy, ubiquitous, and persistent as human and environmental contaminants. PCBs with fewer chlorine atoms may be metabolized to hydroxy- and dihydroxy-metabolites and further oxidized to quinoid metabolites both in vitro and in vivo. Specifically, quinoid metabolites may form adducts on nucleophilic sites within cells. We hypothesized that the PCB-quinones covalently bind to cytochrome c and, thereby, cause defects in the function of cytochrome c. In this study, synthetic PCB quinones, 2-(4′-chlorophenyl)-1,4-benzoquinone (PCB3-pQ), 4-4'-chlorophenyl)-1,2-benzoquinone (PCB3-oQ), 2-(3′, 5′-dichlorophenyl)-1,4-benzoquinone, 2-(3′,4′, 5′-trichlorophenyl)-1,4-benzoquinone, and 2-(4′-chlorophenyl)-3,6-dichloro-1,4-benzoquinone, were incubated with cytochrome c, and adducts were detected by liquid chromatography-mass spectrometry (LC-MS) and matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI TOF). Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was employed to separate the adducted proteins, while trypsin digestion and liquid chromatography-tandem mass spectrometry (LC-MS/MS) were applied to identify the amino acid binding sites on cytochrome c. Conformation change of cytochrome c after binding with PCB3-pQ was investigated by SYBYL-X simulation and cytochrome c function was examined. We found that more than one molecule of PCB-quinone may bind to one molecule of cytochrome c. Lysine and glutamic acid were identified as the predominant binding sites. Software simulation showed conformation changes of adducted cytochrome c. Additionally, cross-linking of cytochrome c was observed on the SDS-PAGE gel. Cytochrome c was found to lose its function as electron acceptor after incubation with PCB quinones. These data provide evidence that the covalent binding of PCB quinone metabolites to cytochrome c may be included among the toxic effects of PCBs.

Dissolved organic nitrogen (DON) is a key precursor of numerous disinfection by-products (DBPs), especially nitrogenous DBPs (N-DBPs) formed during disinfection in drinking water treatment. To effectively control DBPs, reduction of the DON concentration before the disinfection process is critical. Traditional biofilters can increase the DON concentration in the effluent, so an improved biofilter is needed. In this study, an improved biofilter was set up with two-layer columns using activated carbon and quartz sand under different influent patterns. Compared with the single-layer filter, the two-layer biofilter controlled the DON concentration more efficiently. The two-point influent biofilter controlled the DON concentration more effectively than the single-point influent biofilter. The improved biofilter resulted in an environment (including matrix, DO, and pH) suitable for microbial growth. Along the depth of the biofilter column, the environment affected the microbial biomass and microbial activity and thus affected the DON concentration.