Benthic Ecological Quality Ratios (EQR) are important tools for assessing the ecological status of coastal and transitional water bodies. Here, we use spatial and time-series data from Kinsale Harbour, Ireland to examine the effects of sample processing methodologies on the outputs of two EQRs: Multivariate AMBI (M-AMBI) and Infaunal Quality Index (IQI). Both EQRs were robust to changes in sieve size from 1mm to 0.5mm, and to changes in the taxa identified in spatial calibration. Both EQRs classified habitat quality in Kinsale as generally Good or High with no evidence of significant change over the time series (1981–2006). IQI classified the ecological status as higher than M-AMBI. There was a significant relationship between IQI and M-AMBI in spatial calibration, but no significant relationship between them in time series. Further research into the behaviour of EQRs in relation to natural variability over long time-scales is needed to discriminate anthropogenic impacts reliably.

Benthic biofilters were deployed under a cage fish farm and in two reference locations to assess the influence of the farm on the biofilters and the surroundings, as well as to verify the usefulness of this technology as a mitigation tool. The biofilters underneath the farm recruited a fouling community practically identical to that of the control biofilters, which included a variety of trophic strategies. The former showed a higher ¹⁵N enrichment, indicating that fouling beneath the farm was benefiting from the farm waste. The waste retention efficiency was low (0.02gNm⁻²month⁻¹) beneath the farm. Benthic biofilters aggregated demersal wild fish around and within them. Pelagic wild fish also frequently used the biofilters beneath the farm, forming compact shoals around them. The increased complexity of the habitat below the fish farm enhanced biodiversity, but this improvement did not lead to the recovery of the sediments around the biofilters.

The Adriatic coast of Punta Marina (Ravenna) is protected by 3-km long low crested breakwater structures (LCSs). Through a 3-years long multidisciplinar study, we assessed the impact of such defensive structures on environmental and biological condition. LCSs create pools where conditions are very different from the surrounding nearshore system. Mechanical disturbance by currents and waves varied greatly in intensity and frequency between seaward and landward sides of the structures. Sedimentary budget was positive at the landward side, but it was due to a gain on the seafloor and not on the emerged beach. The budget at seaward was negative. LCSs determine differences in benthic assemblages, alter the seasonal pattern of communities, and modify seasonal fluctuations of animal assemblages. Landward sheltered areas can be seen as “lagoonal island” surrounded by a “sea of marine habitat”. Differences in ecological quality status, obtained through M-AMBI, are due to the sum of these factors.

In this study, zebrafish embryos were exposed to titanium dioxide nanoparticles (TiO₂ NPs at 0.1, 0.5, 1, 5, 10mg/L or control) from fertilization to free swimming stage. Hatchability, survival, and malformation rate were not affected by TiO₂ NPs at these exposure levels. However, larval swimming parameters, including average and maximum velocity and activity level were significantly affected by TiO₂ NPs. Co-exposure to either the glutathione precursor, N-acetylcysteine (NAC), or the glutathione synthesis inhibitor, buthionine sulfoximine (BSO), did not significantly alter the behavioral effects resulting from TiO₂ NPs, suggesting that other factor(s) besides oxidative stress may contribute to the behavioral toxicity of TiO₂ NPs. Our study also demonstrated that the behavioral endpoints were more sensitive than the others (e.g., hatchability and survival) to detect toxicity of TiO₂ NPs on developing fish.

Perchlorate is a widespread contaminant in the aquatic environment. In the present work, the expressions of deiodinase enzymes (d1, d2, and d3) and sodium iodide symporter (nis) genes were determined after larval and adult rare minnow (Gobiocypris rarus) exposed to 5 and 50μg/L perchlorate for 21days. The results showed that deflation of swim bladder development was observed in larvae at 50μg/L perchlorate treatment. An up-regulation of the d2 and nis mRNA levels were observed in the larve and in brain of adults. Meanwhile the expressions of d3 mRNA levels were significantly down-regulated in the liver. These results indicate the changes in d2, nis, and d3 mRNA expression brings about increased outer-ring deiodination, idodine uptake, and a further decrease of inner-ring deiodination, respectively reflecting auto-regulation of hypothalamic-pituitary-thyroid (HPT) axis in adult after perchlorate exposure. The larval fish development could be affected by perchlorate at environmentally relevant concentrations.

Eight marine-derived fungi that were previously selected for their abilities to decolorize RBBR dye were subjected to pyrene and benzo[a]pyrene degradation. The fungus Aspergillus sclerotiorum CBMAI 849 showed the best performance with regard to pyrene (99.7%) and benzo[a]pyrene (76.6%) depletion after 8 and 16days, respectively. Substantial amounts of benzo[a]pyrene (>50.0%) depletion were also achieved by Mucor racemosus CBMAI 847. Therefore, these two fungal strains were subjected to metabolism evaluation using the HPLC-DAD-MS technique. The results showed that A. sclerotiorum CBMAI 849 and M. racemosus CBMAI 847 were able to metabolize pyrene to the corresponding pyrenylsulfate and were able to metabolize benzo[a]pyrene to benzo[a]pyrenylsulfate, suggesting that the mechanism of hydroxylation is mediated by a cytochrome P-450 monooxygenase, followed by conjugation with sulfate ions. Because these fungi were adapted to the marine environment, the strains that were used in the present study are considered to be attractive targets for the bioremediation of saline environments, such as ocean and marine sediments that are contaminated by PAHs.

The distribution of Staphylococcus aureus and Listeria monocytogenes in the sea water and marine organisms of Peter the Great and Nha Trang bays, the phenotypic properties and antibiotic sensitivity of the isolates were studied. S. aureus was recorded from 9.3% samples in the Sea of Japan and from 20.4% samples in the South China Sea, L. monocytogenes respectively from 5.9 % and 5.8 % samples. S. aureus and L. monocytogenes found in the tropics differed in their phenotypic properties from those found in the temperate zone. Antibiotic resistance was detected in 81.8% and 71.8% of S. aureus strains and in 19% and 71.4% of L. monocytogenes strains respectively from Peter the Great Bay and from Vietnam. The results show that multiresistant strains of S. aureus and L. monocytogenes are widespread throughout Peter the Great and Nha Trang bays and present a hazard to the health of humans and marine animals.