The Bay of Bakar is one of the most heavily polluted bays at the Eastern Adriatic. Three major industrial companies potentially endanger the bay. The concentration of major, minor and trace elements in surface sediments from thirteen stations was discussed in relation to the sediment type and foraminiferal assemblages. The distribution of major elements in the bay is influenced by geological nature of surroundings. Heavy metal distribution depends on pollution sources and on amount of mud fraction: fine-grained sediments are enriched by them in comparison with coarse-grained ones. Different sediment quality criteria complicate the pollution assessment in the bay. Heavy metal concentrations generally fall into allowed depositional values for marine environments; only area in front of the coke plant and the City of Bakar harbor is heavily polluted. Stress-tolerant foraminiferal species dominate at stations with higher concentrations of heavy metals and coarse-grained sediments consist of larger number of epifaunal taxa.

The concentrations of 16 polycyclic aromatic hydrocarbons (PAHs) were determined in mullet (Liza klunzingeri), water and sediment from northern part of Hormuz strait (Persian Gulf). The concentration levels of total PAHs in L. klunzingeri, water and sediment were 133.99–268.57ngg−1dry weight, 3.12–5.88ngl−1 and 42.29–228.9ngg−1 dry weight, respectively. Based on isomer ratios, analysis of the PAHs source in the sediment demonstrated that the PAHs come from pyrogenic and petrogenic origin. Risk assessment showed PAHs threshold concentrations to occasionally be exceeded in the study area.

The natural petroleum hydrocarbon degrading capacity of the Archipelago Sea water in S-W Finland was studied in a microcosm experiment. Pristine and previously oil exposed sites were examined. Bacterial community fingerprinting was performed using terminal restriction fragment length polymorphism (T-RFLP) and samples from selected microcosms were sequenced. The abundance of PAH degradation genes was measured by quantitative PCR. Bacterial communities in diesel exposed microcosms diverged from control microcosms during the experiment. Gram positive PAH degradation genes dominated at both sites in situ, whereas gram negative PAH degrading genes became enriched in diesel microcosms. The dominant bacterial groups after a 14 days of diesel exposure were different depending on the sampling site, belonging to the class Actinobacteria (32%) at a pristine site and Betaproteobacteria (52%) at a previously oil exposed site. The hydrocarbon degrading bacteria in the Baltic Sea differ from those in the oceans, where most hydrocarbon degraders belong to Gammaproteobacteria.

Monitoring ecological variables is mandatory to detect abnormal changes in ecosystems. When the studied variables exceed predefined alert thresholds, management actions may be required. In the past, alert thresholds have been typically defined by expert judgments and descriptive statistics. Recently, approaches based on statistical power were also used. In New Caledonia, seagrass monitoring is a priority given their vulnerability to natural and anthropic disturbances. To define a suitable monitoring strategy and alert thresholds, we compared a Percentile Based Approach (PBA) and a sensitivity analysis of power (SAP). Both methods defined statistically relevant alert thresholds, but the SAP approach was more robust to spatial and temporal variability of seagrass cover. Moreover, this method characterized the sensitivity of threshold values to sampling efforts, a useful knowledge for managers.

Although present in a low concentration in the atmosphere, mercury in particulate matter (PHg) plays an important role in the biogeochemical process of mercury. In this study, the mercury concentrations in three size fractions of airborne particulate matters collected from 14 sites (12 urban sites, 1 rural site and 1 remote site) in the southeast coastal cities of China during different seasons in 2010–2011 were investigated. Most of PHg (46.8–71.9%) was concentrated in the finer particles, i.e. PM2.5 (particulate matter ≤2.5 µm in aerodynamic diameter). The average mercury concentrations in PM2.5 were 141.2±128.1 (range of 7.6–956.5), 37.0±19.2 (5.6–89.4), and 24.0±14.6 (3.2– 59.9) pg m–3 at urban, rural, and remote sites during the whole sampling period, respectively. The PHg concentrations were almost at the same level in spring, autumn, and winter, approximately two times of that in summer. PHg concentrations in the atmosphere displayed a significant spatial variation with far higher values in urban areas than those at rural and remote sites. The dry deposition fluxes of total PHg estimated by a theoretical model were 38.3, 47.7, and 58.7 µg m–2 y–1 at Ji’an (JA), Jimei (JM), and Longwen (LW), respectively. The backward air trajectory analysis revealed that the atmospheric PHg concentrations were mainly influenced by air masses from ocean sources that diluted PHg in summer and on contrary from continental sources in other seasons.

Between 1972 and 2009, evidence of red tide outbreaks in the Yangtze River Estuary and adjacent waters was collected. A geographic information system (GIS) was used to analyze the temporal and spatial distribution of these red tides, and it was subsequently used to map the distribution of these events. The results show that the following findings. (1) There were three red tide-prone areas: outside the Yangtze River Estuary and the eastern coast of Sheshan, the Huaniaoshan–Shengshan–Gouqi waters, and the Zhoushan areas and eastern coast of Zhujiajian. In these areas, red tides occurred 174 total times, 25 of which were larger than 1000 km2 in areal extent. After 2000, the frequency of red tide outbreaks increased significantly. (2) During the months of May and June, the red tide occurrence in these areas was 51% and 20%, respectively. (3) Outbreaks of the dominant red tide plankton species Prorocentrum dong-haiense, Skeletonema costatum, Prorocentrum dantatum, and Noctiluca scientillan occurred 38, 35, 15, and 10 times, respectively, during the study interval.

Algal assay using marine microalgae has emerged as an important method to evaluate the toxicity of chemicals, which is currently undertaken using conventional culture and additional detection of physiological cellular endpoints. While effective, this approach can be labor-intensive and thus could benefit from a more streamlined, integrated approach. Microfluidics offers a way to accomplish this goal. Here, we demonstrate a microfluidic device which consists of a concentration gradient generator (CGG), diffusible culturing module and power-free valve system. It allows the processes of chemical liquid dilution and diffusion, micro-scale microalgal culture (in batch or chemostatic conditions), cell stimulation and on-lined screening to be integrated into a single device. Using the device, marine microalgae were successfully cultured and stressed on-chip. The simple assay provides multi-biological response measurements of cell division rate, autofluorescence and esterase activity. This work showed promising in developing a microfluidic platform for toxicity screening based on marine microalgal culture.

Real time quantitative Polymerase Chain Reaction (qPCR) was used at four marine bathing beaches in New Jersey as part of a demonstration project to evaluate the potential for use of qPCR as part of a routine beach monitoring program. Split sample analyses for Enterococcus spp. using membrane filtration (MF) and qPCR were performed for 11weeks during the summer of 2011 using swimming advisories based on qPCR results. Comparison of qPCR and MF results from split samples indicated that there was an 82% overall agreement rate between the two methods. Results from the qPCR tests were available by noon the same day of sample collection and swimming advisories were posted on a dedicated website. The qPCR method can be more labor intensive and requires a higher level of training to perform, however, qPCR was able to assess beach water quality in a timelier manner compared to conventional MF techniques.

The impacts of pollution on marine organisms are often investigated using the viability of their haemocytes. Although this assay is routinely used in monitoring, field and laboratory experimentation, there has been less effort in further optimizing procedures to reduce artefacts and facilitate sampling over large geographic areas.Using the oyster Saccostrea glomerata as a model species, we investigated the effects of different techniques for extracting haemolymph, period of incubation with dye and emersion-time (e.g. tidal-state) on the viability of haemocytes. Collecting haemocytes with a syringe, through a drilled hole in the shell, increased the viability of haemocytes by almost 50%. While emersion-time and incubating haemocytes with the dye for up to 4h did not affect viability.This simple in situ approach provides a less destructive method for extracting haemocytes, allowing their viability to be measured as part of large-scale experiments without jeopardizing the surrounding assemblage of animals and plants.

Port Blair is the capital city of Andaman & Nicobar Islands, the union territory of India. More than 50% of the population of these islands lives around Port Blair Bay. Therefore the anthropogenic effects in the bay water were studied for monitoring purpose from seven stations. Physico-chemical parameters of seawater were analyzed in samples collected once in every 3months for 2years from seven sampling stations located in Port Blair Bay, South Andaman Island to evaluate the spatial and tidal variation. Cluster analysis and factor analysis were applied to the experimental data in an attempt to understand the sources of variation of physico-chemical parameters. In cluster analysis, the stations Junglighat Bay and Phoenix Bay having high anthropogenic influence formed a separate group. The factors obtained from factor analysis indicated that the parameters responsible for physico-chemical variations are mainly related to land run-off, sewage outfall and tidal flow.