Impact of mapped SSR markers on the genetic diversity of apricot (Prunus armeniaca L.) in Tunisia

Bourguiba , Hedia
        INRA
         .
         UR 1052 Génétique et Amélioration des Fruits et Légumes; kirchen , Lamia
        .; Audergon , Jean Marc
        INRA
         .
         UR 1052 Génétique et Amélioration des Fruits et Légumes; Khadari , Bouchaib
        INRA
        , Montpellier .
         UMR 1098 Développement et Amélioration des Plantes; Trifi-Farah , Neila
        .

Impact of mapped SSR markers on the genetic diversity of apricot (Prunus armeniaca L.) in Tunisia

2010

Bourguiba , Hedia (INRA (France). UR 1052 Génétique et Amélioration des Fruits et Légumes) | kirchen , Lamia (Université Tunis El-Manar(Tunisie).) | Audergon , Jean Marc (INRA (France). UR 1052 Génétique et Amélioration des Fruits et Légumes) | Khadari , Bouchaib (INRA , Montpellier (France). UMR 1098 Développement et Amélioration des Plantes) | Trifi-Farah , Neila (Université Tunis El-Manar(Tunisie).)

The impact of mapped microsatellites on the study of genetic diversity of Tunisian apricot accessions was assessed. The genetic variability of 47 traditional apricot cultivars originating from several areas in Tunisia was investigated with 32 polymorphic microsatellite loci selected for their location throughout the eight linkage groups of Prunus genome. The higher polymorphism and greater transportability of these markers among Prunus species were proved by the expected heterozygosity (He=0.56) and Shannon’s index of diversity (I=1.05), indicating that Tunisian apricot germplasm maintained a substantial level of genetic diversity. According to their geographical origin, the genetic differentiation among groups (north, center, and south; Fst=0.04) was lower, while the gene flow among groups was consequent (Nm=4.79), attesting a narrow genetic background of apricot in the country. Both unweighted pair-group method with arithmetic mean dendrogram, based on Nei’s genetic distances and factorial correspondence analysis, separated northern cultivars from central and southern cultivars, revealing the same molecular basis of apricot material in the Center and the South of Tunisia. These results revealed the efficiency of mapped markers for genetic variability measurements compared to randomly ones, however, no advantage was observed considering the genetic relationships among studied accessions.

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