Shifting the limits in wheat research and breeding using a fully annotated reference genome

International Wheat Genome Sequencing Consortium (iwgsc), . | Bellec, Arnaud | Berges, Helene | Vautrin, Sonia | Alaux, Michael | Alfama, Françoise | Adam-Blondon, Anne-Francoise | Flores, Raphaël | Guerche, Claire | Letellier, Thomas | Loaec, Mikaël | Quesneville, Hadi | Appels, Rudi | Rigault, Philippe | Choulet, Frédéric | Josselin, Ambre-Aurore | Balfourier, François | Paux, Etienne | Rimbert, Hélène | Guilhot, Nicolas | Leroy, Philippe | Arnaud, Dominique | Chalabi, Smahane | Sourdille, Pierre | Darrier, Benoît | Centre National de Ressources Génomiques Végétales (CNRGV) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Unité de Recherche Génomique Info (URGI) ; Institut National de la Recherche Agronomique (INRA) | Collège de Direction (CODIR) ; Institut National de la Recherche Agronomique (INRA) | Gydle Inc ; Partenaires INRAE | Génétique Diversité et Ecophysiologie des Céréales (GDEC) ; Institut National de la Recherche Agronomique (INRA)-Université Clermont Auvergne [2017-2020] (UCA [2017-2020]) | Institut de Génétique, Environnement et Protection des Plantes (IGEPP) ; Institut National de la Recherche Agronomique (INRA)-Université de Rennes (UR)-AGROCAMPUS OUEST | UAR 1306 Direction du Système d'Information-Unité d'Appui ; Institut National de la Recherche Agronomique (INRA) | Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)) ; Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS) | Agence Nationale pour la Recherche [ANR-11-BSV5-0015-Ploid-Ploid; ANR-16-TERC-0026-01-3DWHEAT]; Agriculture and Agri-Food Canada; Alberta Wheat Development Commission through the Canadian Applied Tricticum Genomics (CTAG2); Australian Government, Department of Industry, Innovation, Climate Change, Science, Research, and Tertiary Education, Australia China Science and Research Fund Group Mission [ACSRF00542]; Australian Research Council Centre of Excellence in Plant Energy Biology [CE140100008]; Australian Research Council [FL140100179]; Bayer CropScience; Biotechnology and Biological Sciences Research Council (BBSRC) [BB/J00426X/1; BB/J004669/1; BB/P016855/1; BB/J003557/1; BB/M014045/1]; Canada First Research Excellence Fund through the Designing Crops for Global Food Security initiative at the University of Saskatchewan; Council for Agricultural Research and Economics, Italy, through CREA-Interomics; Department of Biotechnology, Ministry of Science and Technology, Government of India [BT/IWGSC/03/TF/2008]; DFG [SFB924]; European Commission through the TriticeaeGenome [FP7-212019]; France Genomique Genome Canada through the CTAG2 project [ANR-10-INBS-09]; Genome Prairie through the CTAG2 project; German Academic Exchange Service (DAAD) PPP Australien [1j16]; German Federal Ministry of Food and Agriculture [2819103915 WHEATSEQ]; German Ministry of Education and Research [031A536 de.NBI]; Global Institute for Food Security Genomics and Bioinformatics fund; Gordon and Betty Moore Foundation [GBMF4725]; Grain Research Development Corporation (GRDC) Australia; Graminor AS NFR project [199387]; illumina; INRA, French National Institute for Agricultural Research; International Wheat Genome Sequencing Consortium; Israel Science Foundation [999/12; 1137/17; 1824/12]; Junta de Andalucia, Spain [P12-AGR-0482]; MINECO (Spanish Ministry of Economy, Industry, and Competitiveness) [BIO2011-15237-E]; Ministry of Agriculture, Forestry, and Fisheries of Japan through Genomics for Agricultural Innovation [KGS-1003]; Ministry of Agriculture, Forestry, and Fisheries of Japan through Genomics-based Technology for Agricultural Improvement [NGB-1003]; Ministry of Education and Science of Russian Federation [RFMEFI60414X0106; RFMEFI60414 X0107]; Ministry of Education, Youth, and Sport of the Czech Republic [LO1204]; Nisshin Flour Milling, Inc.; National Research Council of Canada; Norwegian University of Life Sciences (NMBU) NFR project [199387]; National Science Foundation, United States [1339389; DBI-0701916; IIP-1338897]; Russian Science Foundation [14-14-00161]; Saskatchewan Ministry of Agriculture through the CTAG2 project; Saskatchewan Wheat Development Commission through the CTAG2 project; Czech Science Foundation [521/06/1723; 521-08-1629; P501/10/1740; P501/12/2554; P501/12/G090; 14-07164S; 13-08786S]; Research Council of Norway [199387]; U.S. Department of Agriculture NIFA [2008-35300-04588]; University of Zurich; Western Grains Research Foundation; Western Grains Research Foundation National Wheat Improvement Program; Winifred-Asbjornson Plant Science Endowment Fund;French Government [ANR-10-BTBR-03]; FranceAgriMer [2011-0971; 2013-0544]; INRA; NBI Computing infrastructure for Science (CiS) group through the HPC cluster | ANR-11-BSV6-0015,PLOID-PLOID-WHEAT,Caractérisation des réponses à la polyploïdie et l'aneuploïdie chez les angiospermes, utilisant le modèle blé(2011) | ANR-16-TERC-0026,3DWheat,Epigénome, transcriptome, architecture de la chromatine: une étude en trois dimensions de la réponse au stress thermique chez le blé(2016) | European Project: 212019,EC:FP7:KBBE,FP7-KBBE-2007-1,TRITICEAEGENOME(2008)