Analysis of SNPs in Bovine CSRP3, APOBEC2 and Caveolin Gene Family
2007
Bhuiyan, M.S.A. (Chungnam National University, Daejeon, Republic of Korea) | Yu, S.L. (Chungnam National University, Daejeon, Republic of Korea) | Kim, K.S. (Chungbuk National University, Cheongju, Republic of Korea) | Yoon, D.H. (National Institute of Animal Science, RDA, Suwon, Republic of Korea) | Park, E.W. (National Institute of Animal Science, RDA, Suwon, Republic of Korea) | Jeon, J.T. (Gyeongsang National University, Jinju, Republic of Korea) | Lee, J.H. (Chungnam National University, Daejeon, Republic of Korea), E-mail: junheon@cnu.ac.kr
The cysteine and glycine rich protein 3 (CSRP3), apolipoprotein B mRNA editing enzyme catalytic polypeptide like 2 (APOBEC2) and caveolin (CAV) gene family (CAV1, CAV2, CAV3) have been reported to play important roles for carcass and meat quality traits in pig, mouse, human and cattle. As an initial step, we investigated SNPs in these 5 genes among eight different cattle breeds. Eighteen primer pairs were designed from bovine sequence data of NCBI database to amplify the partial gene fragments. Sequencing results revealed 9 SNPs in the coding regions of three caveolin genes, 1 SNP in CSRP3 and 3 SNPs in APOBEC2 gene.
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