Analysis of expressed sequence tags from oil palm (Elaeis guineensis)

Jouannic, Stefan; Argout, Xavier; Lechauve, Frédéric; Fizames, Cécile; Borgel, Alain; Morcillo, Fabienne; Aberlenc-Bertossi, Frédérique; Duval, Yves; Tregear, James

Analysis of expressed sequence tags from oil palm (Elaeis guineensis)

2005

This is the first report of a systematic study of genes expressed by means of expressed sequence tag (EST) analysis in oil palm, a species of the Arecales order, a phylogenetically key clade of monocotyledons that is not widely represented in the sequence databases. Five different cDNA libraries were generated from male and female inflorescences, shoot apices and zygotic embryos and unidirectional systematic sequencing was per-formed. A total of 2411 valid EST sequences were thus obtained. Cluster analysis enabled the identification of 209 groups of related sequences and 1874 singletons. Putative functions were as-signed to 1252 of the set of 2083 non-redundant ESTs obtained. The EST database described here is a first step towards gene discovery and cDNA array-based expression analysis in oil palm. (Résumé d'auteur)

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AGROVOC Keywords

adn banque de gènes elaeis guineensis expression des gènes gène huile de palme identification inflorescence pousse

Bibliographic information

Language

English

License

http://agritrop.cirad.fr/526273/1/document_526273.pdfCirad licenseinfo:eu-repo/semantics/restrictedAccesshttps://agritrop.cirad.fr/mention_legale.html

Type

Journal Article; Journal Article; Journal Part

Source

Tregear, JamesFEBS Letters

In AGRIS since: 2019-03-15

Format: AGRIS AP

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DOI http://agritrop.cirad.fr/526273/ http://agritrop.cirad.fr/526273/1/document_526273.pdf http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=186150

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