Linking Virus Genomes with Host Taxonomy
2016
Tomoko Mihara | Yosuke Nishimura | Yugo Shimizu | Hiroki Nishiyama | Genki Yoshikawa | Hideya Uehara | Pascal Hingamp | Susumu Goto | Hiroyuki Ogata
Environmental genomics can describe all forms of organisms—cellular and viral—present in a community. The analysis of such eco-systems biology data relies heavily on reference databases, e.g., taxonomy or gene function databases. Reference databases of symbiosis sensu lato, although essential for the analysis of organism interaction networks, are lacking. By mining existing databases and literature, we here provide a comprehensive and manually curated database of taxonomic links between viruses and their cellular hosts.
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