BACKGROUND: Tilapia, Oreochromis niloticus, is an omnivorous and important breeding species in the world. Over the recent years, tilapia breeding has begun in Iran. In aquaculture, it is very important to regulate a balanced diet in terms of nutrients needed for growth, which would be also economically appropriate.OBJECTIVES: The main objective of this study was to investigate the effect of substituting chicken waste powder in the diet of fish at levels of 0, 25, 50, 75, and 100 % on the tissue structure of different parts of the intestine of Nile tilapia.METHODS: 75 fish (three frequency per treatment) were fed with chicken waste powder instead of fish meal in their diet for eight weeks at 0, 25, 50, 75, and 100 % levels. At the end of the treatment, separate samples were taken from the initial, middle, and end parts of the intestine. After passing the usual histological steps, the slides were assessed by hematoxylin-eosin staining and TUNEL immunohistochemistry technique.RESULTS: In histometric studies, the highest villi height, thickness, muscle layer, and number of goblet cells were reported in the control group and the lowest in the 100 % group. In immunohistochemical studies, the number of apoptotic cells in groups 75 and 100 % was higher than that in the other groups.CONCLUSIONS: According to the results of the present study, it could be suggested that the replacement of chicken waste powder instead of a fish meal up to 50 % for indigo tilapia is tolerable. However, higher levels of chicken waste powder will reduce absorption, and acceptance of food and have adverse effects on growth.