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Identification of infectious bursal disease virus with atypical VP2 amino acid profile in Latvia
2017
Introduction: Infectious bursal disease virus (IBDV) is a causative agent of immunosuppressive disorder resulting in significant losses to the world poultry industry. This study describes the molecular characterisation of an atypical IBDV from a field outbreak that occurred in vaccinated chicken flocks in Latvia in 2011.Material and Methods: Ten bursae of Fabricius from each flock were collected for laboratory examination. Virus isolation was performed in embryonated eggs and CEF culture. The RT-PCR aimed at hypervariable domain of VP2 gene combined with sequencing was performed for detection and identification of IBDV.Results: The molecular examinations confirmed the IBDV infection. The analysis of the amino acid sequence revealed that the strain possessed four amino acids at VP2 protein (222A, 256I, 294I, and 299S), indicating a genetic relatedness to a very virulent IBDV. However, some unique or rare amino acid substitutions (219L, 220F, 254D, 279N, and 280T) were also detected.Conclusion: The obtained results demonstrate the occurrence of IBDV with a high mutation rate within the hypervariable domain of VP2 peptide, and highlight the necessity of implementation of IBDV surveillance in Eastern European poultry industry to determine whether this strain is an exception or a new wave of IBDV with new genetic features emerged in the field.
Show more [+] Less [-]Identification of infectious bursal disease virus with atypical VP2 amino acid profile in Latvia
2017
Pikuła Anna | Domańska-Blicharz Katarzyna | Cepulis Rytis | Śmietanka Krzysztof
Introduction: Infectious bursal disease virus (IBDV) is a causative agent of immunosuppressive disorder resulting in significant losses to the world poultry industry. This study describes the molecular characterisation of an atypical IBDV from a field outbreak that occurred in vaccinated chicken flocks in Latvia in 2011.
Show more [+] Less [-]Molecular characterisation of infectious bursal disease virus in Namibia, 2017
2019
Molini, Umberto(University of Namibia Faculty of Agriculture and Natural Resources School of Veterinary Medicine) | Aikukutu, Gottlieb(Central Veterinary Laboratory) | Kabajani, Juliet(International Atomic Energy Agency Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture) | Khaiseb, Siegfried(Central Veterinary Laboratory) | Cattoli, Giovanni(International Atomic Energy Agency Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture) | Dundon, William G.(International Atomic Energy Agency Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture)
Between July and September 2017, samples collected from six unvaccinated chickens in Namibia were shown to be positive for infectious bursal disease virus (IBDV) by RT-PCR. Partial sequence and phylogenetic analysis of the VP1 and VP2 genes from six viruses revealed that they all belong to the very virulent pathotype (Genogroup 3) and are genetically very similar to IBDVs identified in neighbouring Zambia. This is the first molecular characterisation of IBDV in Namibia and has implications on the control and management of the disease in the country.
Show more [+] Less [-]Molecular characterisation of infectious bursal disease virus in Namibia, 2017
2019
Umberto Molini | Gottlieb Aikukutu | Juliet Kabajani | Siegfried Khaiseb | Giovanni Cattoli | William G. Dundon
Between July and September 2017, samples collected from six unvaccinated chickens in Namibia were shown to be positive for infectious bursal disease virus (IBDV) by RT-PCR. Partial sequence and phylogenetic analysis of the VP1 and VP2 genes from six viruses revealed that they all belong to the very virulent pathotype (Genogroup 3) and are genetically very similar to IBDVs identified in neighbouring Zambia. This is the first molecular characterisation of IBDV in Namibia and has implications on the control and management of the disease in the country.
Show more [+] Less [-]Distribution of Infectious Bursal Disease (IBD) diagnosed in northern region Of Malaysia from year 2006 to 2016
2017
Thenamutha M. | Sarenasulastri A. B. | Rafidah A. J. | Saipul Bahari A. R.
Data over a period of eleven years was analysed for Infectious Bursal Disease (IBD) virus isolated from chicken samples submit ted to the Regional Veterinary Laboratory at Bukit Tengah, Malaysia (RVLBT) for diagnosis. A total of 247 suspect IBD cases were tested by Virology Section, RVLBT between years of 2006 to 2016. IBD virus has been isolated by using Agar Gel Precipitation Test (AGPT), a bursal homogenate which has been used as an antigen against a known positive antiserum. About 27 cases (11%) from a total of 247 suspect cases in chickens were positive for the presence of IBD. The rate of IBD may be influenced by age of chickens with an increase in the possibility of IBD occurring in chicken older than 3 weeks. Apart from that, both broiler and local chickens are highly susceptible to this disease. Therefore, awareness on the existing IBD cases indicates the importance of strict management procedures, proper management programmes, vaccination and immunisation for chickens in Malaysia.
Show more [+] Less [-]Genomic sequence of infectious bursal disease virus from Zambia suggests evidence for genome re-assortment in nature
2012
Christopher J. Kasanga | T. Yamaguchi | H.M. Munang’andu | P.N. Wambura | K. Ohya | H. Fukushi
Infectious bursal disease virus (IBDV) is a bi-segmented RNA virus, which belongs to the genus Avibirnavirus of the family Birnaviridae. Two serotypes, 1 and 2, exist in IBDV. The serotype 1 IBDVs are the causative agents of infectious bursal disease (IBD) in chickens worldwide and lead to immunosuppression in young birds. Genome re-assortment has been speculated to occur and contribute to the emergence of new IBDV strains. However, evidence was lacking until recently when two re-assortant viruses were detected in China. In this study, we determined the complete nucleotide sequence of an IBDV, designated KZC-104, from a confirmed natural IBD outbreak in Lusaka, Zambia in 2004. The genome consisted of 3074 and 2651 nucleotides in the coding regions of segments A and B, respectively. Alignment of both nucleotide and deduced amino acid sequences, and phylogenetic analysis revealed that the genome segment A of KZC-104 was derived from a very virulent strain, whereas its segment B was derived from a classical attenuated strain. On BLAST search, the full-length segments A and B sequences showed 98% closest nucleotide homology to the very virulent strain D6948 and 99.8% closest nucleotide homology to the classical attenuated strain D78, respectively. This is a unique IBDV reassortant strain, which has emerged in nature involving segment B of a live attenuated vaccine. This observation provides direct evidence for the involvement of vaccine strains in the emergence of reassortant IBDV in the field. Taken together, these findings suggest an additional risk of using live IBDV vaccines, which may act as genetic donors for genome re-assortment. Further studies are required to investigate the epidemiology and biological characteristics of reassortant strains so that the appropriate and safe IBDV vaccines can be recommended.
Show more [+] Less [-]One-step reverse-transcription loop-mediated isothermal amplification for detection of infectious bursal disease virus
2011
Lee, Meng-Shiou | Lin, Yi-Chiu | Lai, Guan-Hua | Lai, Su-Yaun | Chen, Hsi-Jien | Wang, Min-Ying
A fast, sensitive, and specific reverse-transcription (RT) loop-mediated isothermal amplification (RT-LAMP) assay was developed that involved a single tube and a 1-step reaction for detecting infectious bursal disease virus (IBDV). Four specific primers were used for amplification of the VP2 gene of IBDV. The amplified LAMP products were detected by DNA electrophoresis and by direct observation with the naked eye in the presence of SYBR Green I. The sensitivity of RT-LAMP was determined to be 0.01 fg of IBDV viral RNA. This assay for IBDV is more sensitive than the conventional RT-polymerase chain reaction assay, which has a detection limit of 1 ng. The LAMP assay was also assessed for specificity and was found to precisely discriminate between positive and negative test samples. This newly established LAMP assay, combined with RT, is a practical diagnostic tool because IBDV-infected and uninfected clinical samples collected from an experimental farm could be discriminated. Full verification of a sample’s IBDV status was obtained within 40 min of extraction of the viral RNA, which could then be directly added to the RT-LAMP reaction mixture.
Show more [+] Less [-]Sequence analysis of segment A gene of a very virulent infectious bursal disease virus recently isolated in Korea
2011
Oh, H.S., Kangwon National University, Chuncheon, Republic of Korea | Lee, J.H., Kangwon National University, Chuncheon, Republic of Korea | Kwon, H.M., Kangwon National University, Chuncheon, Republic of Korea | Sung, H.W., Kangwon National University, Chuncheon, Republic of Korea
Infectious bursal disease virus (IBDV) is a member of the Avibirnavirus genus of the Birnaviridae family which genome consists of two segments (A and B) of double stranded RNA. Segment A gene of KNU08010 isolate, which was isolated from a 15-day-old chicken flock in 2008, was sequenced and compared with other IBDV isolates including SH/92 strain, the first Korean very virulent (vv) IBDV isolate. The amino acid sequences of segment A gene showed that KNU08010 had 99.2% homology with SH92 strain. KNU08010 isolate had specific amino acids A222, I242, I256, I294 and S299 which are highly conserved among vvIBDV strains. Phylogenetic analysis based on the nucleotide sequences of variable region of the VP2 gene of 18 IBDV strains revealed that KNU08010 was grouped with vvIBDVs and was closely related to Korean vvIBDVs isolated from wild birds.
Show more [+] Less [-]Sequence analysis of VP2 gene of infectious bursal disease virus field isolate and vaccine strains
2006
Jin, J.D. (Kangwon National University, Chuncheon, Republic of Korea) | Kang, Z.W. (Kangwon National University, Chuncheon, Republic of Korea) | Kim, S.J. (Seoul National University, Seoul, Republic of Korea) | Kwon, H.M. (Kangwon National University, Chuncheon, Republic of Korea) | Hahn, T.W. (Kangwon National University, Chuncheon, Republic of Korea), E-mail: twhahn@kangwon.ac.kr
The VP2 full gene of Korean infectious bursal disease virus (IBDV) strain, SH/92, three attenuated vaccine strains, Bur706, Bursine-2 and CEVAC strains, were amplified by reverse transcriptase-polymerase chain reaction and sequenced and compared with published PV2 gene sequences of IBDVs. The VP2 nucleotide sequence similarity between SH/92 and three vaccine stains was 95.6~96.5% whereas the nucleic acid similarity among three vaccine strains was 97.5~98.5%. The amino acid sequence similarity of VP2 of SH/92 compared with three vaccine strains was between 94.4 and 97.6% while the amino acid similarity among three vaccine strains was between 97.4 and 98.4%.
Show more [+] Less [-]Effects of cyclophosphamide in newly hatched chickens after inoculation with avian nephritis virus
1990
Narita, M. | Kawamura, H. | Furuta, K. | Shirai, J. | Nakamura, K.
Effects of immunosuppression were compared in newly hatched chickens given cyclophosphamide (CY) after inoculation with avian nephritis virus (ANV). All CY-treated infected chickens died within 13 days after inoculation of the virus and had heavy urate deposits throughout the body. However, non-CY-treated infected, CY-treated noninfected, and non-CY-treated noninfected control chickens survived through the observation period. In a chronologic study, the value of serum uric acid in CY-treated infected chickens was more than 3 times higher than that in non-CY-treated infected chickens, and more than 9 times higher than in noninfected chickens. Serum uric acid values were coincident with the positive degree of ANV antigen in the tubular epithelial cells in the kidneys and with the severity of renal degeneration. Serologic and immunohistologic examinations did not reveal detectable antibody and IgG- and IgM-containing cells in the spleen and kidneys of CY-treated infected chickens. However, non-CY-treated infected chickens had an increased number of IgM- and IgG-containing cells and antibody against ANV on postinoculation day 6. These findings demonstrated that CY treatment enhanced the susceptibility of chickens to ANV infection.
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