Tick-borne diseases (TBDs) caused by Theileria, Babesia, Anaplasma and Ehrlichia species are common in tropical and subtropical regions. In this study, we investigated the presence and genetic diversity of Theileria spp., Anaplasma ovis, B. ovis, E. ruminantium and Anaplasma spp. in sheep from the Machakos and Homa Bay counties of Kenya. In order to improve the diagnosis and control of ovine TBDs, a total of 76 blood samples from apparently healthy sheep were screened using a polymerase chain reaction (PCR). The assays were conducted using primers based on Theileria spp. 18S rRNA, Anaplasma ovis Major surface protein-4 (AoMSP4), B. ovis 18S rRNA, E. ruminantium pCS20 and Anaplasma spp. 16S rRNA. The overall infection rates for Theileria spp., A. ovis, E. ruminantium and Anaplasma spp. were 39/76 (51.3%), 26/76 (34.2%), 6/76 (7.9%) and 31/76 (40.8%), respectively. The overall co-infection was 47/76 (61.8%). All Theileria spp. positive samples were confirmed to be of Theileria ovis on sequencing. A phylogenetic analysis of the 18S rRNA gene sequences of T. ovis revealed that all isolates of this study clustered with T. ovis sequences extracted from the GenBank suggesting this gene is highly conserved. E. ruminantium pCS20 sequences were in the same clade on the phylogenetic tree. However, three AoMSP4 sequences from this study appeared in the same clade, while one sequence formed a separate branch revealing genetic divergence. The 16S rRNA sequencing revealed uncharacterised Anaplasma spp. and A. ovis. The phylogenetic analyses of the uncharacterised Anaplasma spp. revealed that the two sequences from this study appear in an independent clade from other sequences extracted from the GenBank. This study provides important information regarding the occurrence of tick-borne pathogens and their degree of genetic diversity among sheep in Kenya, which is useful for the diagnosis and control of TBDs.

Tick-borne diseases (TBDs) caused by Theileria, Babesia, Anaplasma and Ehrlichia species are common in tropical and subtropical regions. In this study, we investigated the presence and genetic diversity of Theileria spp., Anaplasma ovis, B. ovis, E. ruminantium and Anaplasma spp. in sheep from the Machakos and Homa Bay counties of Kenya. In order to improve the diagnosis and control of ovine TBDs, a total of 76 blood samples from apparently healthy sheep were screened using a polymerase chain reaction (PCR). The assays were conducted using primers based on Theileria spp. 18S rRNA, Anaplasma ovis Major surface protein-4 (AoMSP4), B. ovis 18S rRNA, E. ruminantium pCS20 and Anaplasma spp. 16S rRNA. The overall infection rates for Theileria spp., A. ovis, E. ruminantium and Anaplasma spp. were 39/76 (51.3%), 26/76 (34.2%), 6/76 (7.9%) and 31/76 (40.8%), respectively. The overall co-infection was 47/76 (61.8%). All Theileria spp. positive samples were confirmed to be of Theileria ovis on sequencing. A phylogenetic analysis of the 18S rRNA gene sequences of T. ovis revealed that all isolates of this study clustered with T. ovis sequences extracted from the GenBank suggesting this gene is highly conserved. E. ruminantium pCS20 sequences were in the same clade on the phylogenetic tree. However, three AoMSP4 sequences from this study appeared in the same clade, while one sequence formed a separate branch revealing genetic divergence. The 16S rRNA sequencing revealed uncharacterised Anaplasma spp. and A. ovis. The phylogenetic analyses of the uncharacterised Anaplasma spp. revealed that the two sequences from this study appear in an independent clade from other sequences extracted from the GenBank. This study provides important information regarding the occurrence of tick-borne pathogens and their degree of genetic diversity among sheep in Kenya, which is useful for the diagnosis and control of TBDs.

Several types of odours are involved in the location of host animals by tsetse (Diptera: Glossinidae), a vector of animal African trypanosomiasis. Host animals' ageing urine has been shown to be the source of a phenolic blend attractive to the tsetse. Nevertheless, limited research has been performed on the microbial communities' role in the production of phenols. This study aimed at profiling bacterial communities mediating the production of tsetse attractive phenols in mammalian urine. Urine samples were collected from African buffalo (Syncerus caffer), cattle (Bos taurus) and eland (Taurotragus oryx) at Kongoni Game Valley Ranch and Kenyatta University in Kenya. Urine samples, of each animal species, were pooled and left open to age in ambient conditions. Bacteriological and phenols analyses were then carried out, at 4 days ageing intervals, for 24 days. Phenols analysis revealed nine volatile phenols: 4-cresol, ortho-cresol, 3-cresol, phenol, 3-ethylphenol, 3-propylphenol, 2-methyloxyphenol, 4-ethylphenol and 4-propylphenol. Eight out of 19 bacterial isolates from the ageing urine revealed the potential to mediate production of phenols. 16S rRNA gene characterisation of the isolates closely resembled Enterococcus faecalis KUB3006, Psychrobacter alimentarius PAMC 27887, Streptococcus agalactiae 2603V, Morganella morganii sub.sp. morganii KT, Micrococcus luteus NCTC2665, Planococcus massiliensis strain ES2, Ochrobactrum pituitosum AA2 and Enterococcus faecalis OGIRF. This study established that some of the phenols emitted from mammalian urine, which influence the tsetse's host-seeking behaviour, are well characterised by certain bacteria. These results may allow the development of biotechnological models in vector control that combines the use of these bacteria in the controlled release of semiochemicals.

Several types of odours are involved in the location of host animals by tsetse (Diptera: Glossinidae), a vector of animal African trypanosomiasis. Host animals’ ageing urine has been shown to be the source of a phenolic blend attractive to the tsetse. Nevertheless, limited research has been performed on the microbial communities’ role in the production of phenols. This study aimed at profiling bacterial communities mediating the production of tsetse attractive phenols in mammalian urine. Urine samples were collected from African buffalo (Syncerus caffer), cattle (Bos taurus) and eland (Taurotragus oryx) at Kongoni Game Valley Ranch and Kenyatta University in Kenya. Urine samples, of each animal species, were pooled and left open to age in ambient conditions. Bacteriological and phenols analyses were then carried out, at 4 days ageing intervals, for 24 days. Phenols analysis revealed nine volatile phenols: 4-cresol, ortho-cresol, 3-cresol, phenol, 3-ethylphenol, 3-propylphenol, 2-methyloxyphenol, 4-ethylphenol and 4-propylphenol. Eight out of 19 bacterial isolates from the ageing urine revealed the potential to mediate production of phenols. 16S rRNA gene characterisation of the isolates closely resembled Enterococcus faecalis KUB3006, Psychrobacter alimentarius PAMC 27887, Streptococcus agalactiae 2603V, Morganella morganii sub.sp. morganii KT, Micrococcus luteus NCTC2665, Planococcus massiliensis strain ES2, Ochrobactrum pituitosum AA2 and Enterococcus faecalis OGIRF. This study established that some of the phenols emitted from mammalian urine, which influence the tsetse‘s host-seeking behaviour, are well characterised by certain bacteria. These results may allow the development of biotechnological models in vector control that combines the use of these bacteria in the controlled release of semiochemicals.

Lake Kariba is a tropical lake with slight variations in seasonal temperature. Temperature is an important physical variable in the biology of both fish and their parasites. Currently, there is no information on the seasonal occurrence of fish parasites in Lake Kariba. The objective of this study was to investigate the seasonal occurrence of metazoan parasites in Hydrocynus vittatus in Lake Kariba, Zimbabwe. Twenty fish specimens were collected by seine netting per season between October 2014 and July 2015 in the Sanyati Basin, Lake Kariba, and examined for metazoan parasites. Mean water temperatures ranged from 24.1 °C to 31.2 °C with slight variations between the seasons. Metazoan parasites consisting of Monogenea (Annulotrema pikei, Annulotrema pseudonili, Annulotrema bracteatum), Nematoda (Contracaecum larvae), Copepoda (Lamproglena hemprichii), Cestoda (larval cestodes, Ichthybothrium sp.) and Pentastomida (pentastomid larvae) were recorded. Larval cestodes were recorded in autumn and spring, while pentastome larvae were recorded in summer and spring. The Ichthybothrium sp. was recorded once in winter. Annulotrema pikei and A. pseudonili were observed on the gills and A. bracteatum on both the gills and the skin. Contracaecum larvae, L. hemprichii and A. bracteatum (from the skin) were recorded in all the seasons, with slight variations in prevalence, mean abundance and mean intensity. However, these variations were not statistically significant (analysis of variance or ANOVA, p > 0.05). The slight variations in occurrence of the parasites were probably because of the thermal stability of the lake where variation in temperature was small between seasons. Both A. bracteatum and Contracaecum larvae were aggregated on the fish host, whereas L. hemprichii exhibited a random distribution. Parasite diversity was at its highest during winter.

Lake Kariba is a tropical lake with slight variations in seasonal temperature. Temperature is an important physical variable in the biology of both fish and their parasites. Currently, there is no information on the seasonal occurrence of fish parasites in Lake Kariba. The objective of this study was to investigate the seasonal occurrence of metazoan parasites in Hydrocynus vittatus in Lake Kariba, Zimbabwe. Twenty fish specimens were collected by seine netting per season between October 2014 and July 2015 in the Sanyati Basin, Lake Kariba, and examined for metazoan parasites. Mean water temperatures ranged from 24.1 °C to 31.2 °C with slight variations between the seasons. Metazoan parasites consisting of Monogenea (Annulotrema pikei, Annulotrema pseudonili, Annulotrema bracteatum), Nematoda (Contracaecum larvae), Copepoda (Lamproglena hemprichii), Cestoda (larval cestodes, Ichthybothrium sp.) and Pentastomida (pentastomid larvae) were recorded. Larval cestodes were recorded in autumn and spring, while pentastome larvae were recorded in summer and spring. The Ichthybothrium sp. was recorded once in winter. Annulotrema pikei and A. pseudonili were observed on the gills and A. bracteatum on both the gills and the skin. Contracaecum larvae, L. hemprichii and A. bracteatum (from the skin) were recorded in all the seasons, with slight variations in prevalence, mean abundance and mean intensity. However, these variations were not statistically significant (analysis of variance or ANOVA, p > 0.05). The slight variations in occurrence of the parasites were probably because of the thermal stability of the lake where variation in temperature was small between seasons. Both A. bracteatum and Contracaecum larvae were aggregated on the fish host, whereas L. hemprichii exhibited a random distribution. Parasite diversity was at its highest during winter.

Canine parvovirus-2 (CPV-2) is the aetiological agent of an infectious viral disease of dogs, characterised by diarrhoea and vomiting. Mutations of the CPV-2 genome have generated new variants circulating worldwide. This article reports the molecular analysis of CPV-2 variants collected in the dog population in southeast Anatolia, Turkey. Twenty blood samples previously taken for the laboratory diagnosis of dogs with suspected parvovirus were screened for CPV-2 by polymerase chain reaction (PCR). Of the 20 samples, 18 tested positive for CPV-2. Partial VP2 gene sequencing and restriction fragment length polymorphism (RFLP) analysis revealed CPV-2a (n = 1), CPV-2b (n = 16) and CPV-2c (n = 1) variants. Phylogenetic analysis based on the partial length VP2 gene showed that CPV-2b (n = 15) variants showed sequences clustering separately in the phylogenetic tree. The CPV-2c sample was phylogenetically related to Chinese strains and Indonesia strain, whereas the CPV-2a sample was phylogenetically related to the Portuguese strain. These results, which are the first to demonstrate the presence of CPV-2c in the dog population of southeast Anatolia, Turkey, indicate that CPV-2a/2b/2c variants co-exist in Turkey's dog population.

Canine parvovirus-2 (CPV-2) is the aetiological agent of an infectious viral disease of dogs, characterised by diarrhoea and vomiting. Mutations of the CPV-2 genome have generated new variants circulating worldwide. This article reports the molecular analysis of CPV-2 variants collected in the dog population in southeast Anatolia, Turkey. Twenty blood samples previously taken for the laboratory diagnosis of dogs with suspected parvovirus were screened for CPV-2 by polymerase chain reaction (PCR). Of the 20 samples, 18 tested positive for CPV-2. Partial VP2 gene sequencing and restriction fragment length polymorphism (RFLP) analysis revealed CPV-2a (n = 1), CPV-2b (n = 16) and CPV-2c (n = 1) variants. Phylogenetic analysis based on the partial length VP2 gene showed that CPV-2b (n = 15) variants showed sequences clustering separately in the phylogenetic tree. The CPV-2c sample was phylogenetically related to Chinese strains and Indonesia strain, whereas the CPV-2a sample was phylogenetically related to the Portuguese strain. These results, which are the first to demonstrate the presence of CPV-2c in the dog population of southeast Anatolia, Turkey, indicate that CPV-2a/2b/2c variants co-exist in Turkey’s dog population.

This epidemiological study aimed to determine the species of tick infestation in dogs, their prevalence and dynamic in the Bejaia province, northeastern Algeria. A total of 631 dogs were examined from different localities of the Bejaia province between March 2016 and February 2017. Of the 631 examined dogs, 15% were infested with one or more tick species. A total of 339 adult ticks were collected and identified, including 199 male tick species and 140 female tick species. Our results revealed that most of these were Rhipicephalus species, with Rhipicephalus sanguineus (51.32%) being the most prevalent followed by Rhipicephalus bursa (35.1%) and Rhipicephalus turanicus (12.98%). Ixodes ricinus represented only 0.6% of all ticks collected. The highest infested seasons were spring (22.55%) and summer (22.54%) and the lowest infested seasons were autumn (8.62%) and winter ( 0.9%). There is no significant difference between the sex of the animal and the prevalence of infestation (p = 0.837). Also, the prevalence of infestation by ticks in young animals was higher than that in adult animals (p = 0.550). A significant difference between the prevalence of infestation and animal breed was observed (p = 0.042). This study is the first epidemiological investigation conducted on the prevalence of hard ticks infesting domestic dogs in Bejaia (northeastern Algeria) based on conventional methods. It is therefore necessary to implement an effective tick control strategy during infestation periods in order to prevent vector-borne diseases.

This epidemiological study aimed to determine the species of tick infestation in dogs, their prevalence and dynamic in the Bejaia province, northeastern Algeria. A total of 631 dogs were examined from different localities of the Bejaia province between March 2016 and February 2017. Of the 631 examined dogs, 15% were infested with one or more tick species. A total of 339 adult ticks were collected and identified, including 199 male tick species and 140 female tick species. Our results revealed that most of these were Rhipicephalus species, with Rhipicephalus sanguineus (51.32%) being the most prevalent followed by Rhipicephalus bursa (35.1%) and Rhipicephalus turanicus (12.98%). Ixodes ricinus represented only 0.6% of all ticks collected. The highest infested seasons were spring (22.55%) and summer (22.54%) and the lowest infested seasons were autumn (8.62%) and winter ( 0.9%). There is no significant difference between the sex of the animal and the prevalence of infestation (p = 0.837). Also, the prevalence of infestation by ticks in young animals was higher than that in adult animals (p = 0.550). A significant difference between the prevalence of infestation and animal breed was observed (p = 0.042). This study is the first epidemiological investigation conducted on the prevalence of hard ticks infesting domestic dogs in Bejaia (northeastern Algeria) based on conventional methods. It is therefore necessary to implement an effective tick control strategy during infestation periods in order to prevent vector-borne diseases.

Between July and September 2017, samples collected from six unvaccinated chickens in Namibia were shown to be positive for infectious bursal disease virus (IBDV) by RT-PCR. Partial sequence and phylogenetic analysis of the VP1 and VP2 genes from six viruses revealed that they all belong to the very virulent pathotype (Genogroup 3) and are genetically very similar to IBDVs identified in neighbouring Zambia. This is the first molecular characterisation of IBDV in Namibia and has implications on the control and management of the disease in the country.

Between July and September 2017, samples collected from six unvaccinated chickens in Namibia were shown to be positive for infectious bursal disease virus (IBDV) by RT-PCR. Partial sequence and phylogenetic analysis of the VP1 and VP2 genes from six viruses revealed that they all belong to the very virulent pathotype (Genogroup 3) and are genetically very similar to IBDVs identified in neighbouring Zambia. This is the first molecular characterisation of IBDV in Namibia and has implications on the control and management of the disease in the country.