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First Report of Enterobacter hormaechei Isolated from Agricultural Soil in the Biodegradation of Glyphosate
2024
Badani, Hadjer | Haddad, Fatma Zohra | ElOuissi, AbdElKader
Several studies have explored the utilization of soil microorganisms, to address the environmental issues associated with glyphosate use and enhance crop yields. In our investigation, screening on Agar plate and broth medium Luria Bertani was carried out after isolating bacterial strains from rhizospheric agricultural soil in Mascara, Algeria, to biodegrade glyphosate, following that by testing the Plant Growth-Promoting Rhizobacteria and evaluate the effects of glyphosate on these proprieties. Our findings indicate that five bacterial strains exhibited growth in the presence of glyphosate concentrations up to 25 mg/ml, beyond this concentration the strains have developed tolerance. Following a partial examination of the 16S rRNA sequences, the bacterial strains were identified as belonging to the genus of Enterobacter. After 10 days of incubation with the glyphosate, Phosphate solubilization decreased in broth and agar Pikovskaya medium and the bacterial strains synthetized less of indole-3-acetic acid compared to the control, indicating the impact of glyphosate on these outcomes, high concentration of glyphosate inhibited nitrogen fixation, and various doses of glyphosate were found to restrict the growth of biofilms in these strains. The results of HPLC examination of secondary metabolites revealed that the primary degradation products of glyphosate in all strains were Sarcosine and Glycine. So, it seemed that the strain could both biodegrade glyphosate and use it for growth ,while also possessing rhizobacteria properties that promote plant development, enabling the use of the strains in the bioremediation of glyphosate-contaminated soils.
Show more [+] Less [-]Novel Bacterial Strains Pseudomonas sp. and Bacillus sp. Isolated from Petroleum Oil Contaminated Soils for Degradation of Flourene and Phenanthrene
2019
Bharti, V. | Gupta, B. | Kaur, J.
Flourene and phenanthrene are organic compounds with high hydrophobicity and toxicity. Being recalcitrant in nature they are accumulating in the environment at an alarming concentration, posing serious threat to living beings. Thus in the present study, microorganisms were screened for their ability to degrade these contaminants at high concentrations in least period of time. Two out of fifteen isolates screened showed growth in basal medium containing 25 mg/l of fluorene/phenanthrene as the only carbon source. These selected isolates were acclimatised with step wise increased concentrations of flourene/phenanthrene for 165 days in basal medium. The acclimatised strains were identified and characterised on the basis of their morphological and biochemical characteristics and 16S rRNA gene sequence analysis. Results showed close relatedness of the isolates to Pseudomonas aeruginosa sp. and Bacillus safensis sp. Biodegradation studies carried out with these acclimatised strains at optimum conditions (pH 7 and temperature 30°C) showed 62.44% degradation of fluorene and 54.21% of phenanthrene in 10 days by Pseudomonas sp. VB92, whereas, Bacillus sp. JK17 degraded 43.64% of fluorene and 59.91% of phenanthrene in 12 days, at an initial concentration of 200 mg/l, as determined by HPTLC. During fluorene degradation by Pseudomonas sp. VB92, one metabolite was identified as fluorene,1,4-dihydro. An anionic biosurfactant (emulsification index of 80%) produced by strain VB92 during growth with PAHs, improved its degradation rate. This showed strong potential of the acclimatised strains for bioremediation and reclamation of polyaromatic hydrocarbon contaminated sites.
Show more [+] Less [-]Enhanced Bioremediation of Brass Crude-Oil (Hydrocarbon), Using Cow Dung and Implication on Microbial Population
2018
Olawepo, Gabriel | Ogunkunle, Clement | Adebisi, Olusoji | Fatoba, Paul
The present study has used soil samples from Nigeria, contaminated with Brass crude-oil, to determine its biodegradation through enhanced biostimulation with cow dung and periodic aeration. Over a period of twenty-eight days, the hydrocarbon-utilizing bacteria (HUB) and hydrocarbon-utilizing fungi (HUF) have been counted and identified. Results from biodegradation of the brass crude-oil over the aforementioned period show that amended crude-oil-spiked soil has had 54.82% degradation while for amendment and periodic turning this has been 55.90%, not significantly higher than the former at p≤0.05. Also degradation of spiked soil without cow dung amendment has been 16.13%. The identified HUB are Staphylococcus aureus, Pseudomonas aeruginosa, Bacillus subtilis, and Streptococcus thermophillus, with individual occurrence of 18.52% as well as Proteus vulgaris and Micrococcus luteus with 11.11% and 14.81% occurrence, respectively. Also, the occurrence rate of HUF like Aspergillus flavus, A. niger, Penicillium chrysogenum, Trichothecium roseum, and Penicillium citrinum have been 15.63% each;whilefor Alternaria alternata and Neurospora crazza it has been 6.25% and for Saccharomyces cerevisae and A. fumigatus, 9.38%and3.13%, respectively. The study concludes that amendment with cow dung and periodic turning of the soil enhance degradation of Brass crude-oil significantly. What is more, aeration by periodic turning slightly improves degradation only with cow dung treatment on Days 21 and 28.
Show more [+] Less [-]Biodegradation of UV light treated plastic waste using local bacterial isolates
2024
Sabei, Ansam | Gatea, Iman | Mousa, Nibal | Abbas, Adnan | Ojaily, Gameela | Tawfeeq, Rana | Abid, Ameena
Environmental threats from the accumulation of plastic trash are getting worse. It is robust, lightweight, corrosion-resistant, affordable, and durable. Microorganisms play a significant role in protecting our environment by degrading plastic wastes that are harmful either naturally or by chemical modification. The current study aims to investigate the biodegradation of synthetic polyethylene through the utilization of a laboratory bioreactor. Various types of additives were introduced to the soil samples before subjecting them to a 30-day UV treatment. The degradation of polyethylene was shown through a reduction in weight following a 24-week incubation period with certain bacterial strains. Experimental findings have revealed that models subjected to UV radiation exhibit the highest degree of vulnerability and degradation. Approximately 52% of polyethylene (PE) films underwent degradation when exposed to soil enhanced with peat moss. In contrast, only 40% and 45% of PE films were destroyed when subjected to garden soil that was untreated and treated with UV radiation, respectively. In contrast, the addition of husk resulted in a 48% to 53% reduction in weight for PE films that were buried for the same duration of the experiment. The highest level of effectiveness was achieved by the disintegration of the plastic material that was introduced into the soil along with organic fertilizers, resulting in a value of 56.60%. The weight loss outcomes have been substantiated by the utilization of the Atomic Force Electron Microscope (AFM) images, which exhibited the highest magnitude in the experimental model using soil supplemented with fertilizers.
Show more [+] Less [-]The Rhizospheric Soil of Sparganium erectum L. Plant: A new Source of Efficient Bacteria for Azo Dye Decolorization
2023
Nikkhah, Masoumeh | Pourbabaei, Ahmad Ali | Shariati, Shayan | Shakiba, Mina
The purpose of our study was to identify the native bacteria with the ability to degrade azo dyes from the rhizosphere of Sparganium erectum L., and Typha latifolia L. plants that were grown on a drain of a textile mill. Eight and one strain with decolorization ability of Cibacron Brilliant Red EB and Terasil Red 3BL-01 were isolated from the saline rhizosphere of Sparganium erectum L. and latifolia L. plant respectively. Results showed that the bacteria isolated from the rhizosphere of Sparganium erectum L. are more capable of decolorizing azo dyes. Based on the 16S rRNA sequencing, selected strains were identified as follows: Enterobacter ludwigii strain SNP3 (OL719291), Rhodococcus fascians strain SNP5 (OL759129), Pseudomonas aeruginosa strain SNP10 (OL759126), and Bacillus safensis strain SNP13 (OL759127). The results of azo dyes biodegradation tests revealed that strains SNP10, SNP3, and SNP5 were more capable of decolorizing 94-97%, 72.53-73.8, 72.53%, and 71.13-73.5% of Cibacron Brilliant Red EB at concentration 10-20 mg/L within 72 h, respectively. Besides, strain SNP13 was the fastest strain in decolorization of Cibacron Brilliant Red EB with 68% and 59% decolorization activity at 10 and 20 mg/L respectively (24 h). Only strains SNP3 and SNP13 could decolorize 83% and 77% of Terasil Red 3BL-01 (30 mg/L), respectively. For the first time, our research findings illustrated that indigenous rhizospheric bacterial strains isolated from Sparganium erectum L. plants have the potential to apply as an azo dye breakdown tool in textile effluent treatment or other ecosystems.
Show more [+] Less [-]Physico-Chemical and Microbiological Assessment of Soils from Dumpsites for Plastic Degrading Microorganisms
2022
Emmanuel-Akerele, Hilda Abiola | Akinyemi, Priscilla Oluwatomi
Plastic pollution is a threat to the environment because of its slow degradation rate and high usage. The aim of this study is to isolate plastic degrading microorganisms from soils. The soil samples used for this study were collected from dumpsites filled with plastic and plastic materials and the effectiveness of the degradation of plastic materials was studied over a period of six (6) weeks in broth and agar culture under laboratory conditions by weight determination method. Physicochemical and microbiological analysis was carried out on the various soil samples using standard protocols. The biodegradation of polyvinylchloride (PVC) was done in-vitro using the microorganisms isolated from the soil. Microorganisms that were able to degrade a higher percentage of the plastic materials were; Staphylococcus aureus, Streptococcus sp, Bacillus sp, Escherichia coli Aspergillus niger, Aspergillus flavus and Trichoderma viridae. The total viable count for bacteria and fungi were within the range of 11.8x105 CFU/g to 2.0x1010 CFU/g and 3.3x105 CFU/g to 0.1x1011 CFU/g respectively. Staphylococcus aureus, Streptococcus sp, Bacillus sp, Micrococcus sp, Aspergillus niger, Aspergillus flavus, and Trichoderma viridae, degraded plastic up to 25%, 31.2%, 25% 31.2%, 12%, 10% and 10% respectively. These isolates may be used to actively degrade plastics, thereby reducing the rate of plastic pollution in our ecosystem.
Show more [+] Less [-]Review on Bioremediation: A Tool to Resurrect the Polluted Rivers
2019
Shishir, T. A. | Mahbub, N. | kamal, N. E.
The term bioremediation describes biological machinery of recycling wastes to make them harmless and useful to some extent. Bioremediation is the most proficient tool to manage the polluted environment and recover contaminated river water. Bioremediation is very much involved in the degradation, eradication, restriction, or reclamation varied chemical and physical hazardous substances from the nearby with the action of all-inclusive microorganisms. The fundamental principle of bioremediation is disintegrating and transmuting pollutants such as hydrocarbons, oil, heavy metal, pesticides and so on. Different microbes like aerobic, anaerobic, fungi and algae are incorporated in bioremediation process. At present, several methods and approaches like bio stimulation, bio augmentation, and monitoring natural recovery are common and functional in different sites around the world for treating contaminated river water. However, all bioremediation procedures it has its own pros and cons due to its own unambiguous application. Above all, utilization of bioremediation paving a minimal inconsiderably contaminated, healthy as well as safe and sound future.
Show more [+] Less [-]Aerobic degradation of methylene blue from colored effluents by Ralstonia eutropha
2017
Habibi, Alireza | Mehrabi, Zahra
The present paper has examined the degrading ability of phenol-oxidizing bacterium, Ralstonia eutropha, for biological removal of methylene blue (MB) from aqueous solutions under aerobic conditions. Results show that MB has been extensively eliminated as a co-metabolism in the presence of supplementary carbon (glucose) and nitrogen (yeast extract and peptone) sources and the experimental observations indicate that MB is initially adsorbed on the cell’s surface, in accordance to Langmuir Theory, then to be degraded by the cell. The type of nitrogen source, initial pH, aeration rate, and the presence of CaCl2 are all influential factors in the process of MB removal. The biodegradation kinetics modeling has determined that while playing an uncompetitive role, MB inhibits its biodegradation at high concentrations. According to the best fit Han-Levenspiel Model, the maximum MB specific biodegradation rate (rmax), half-saturation concentration of MB (KS), maximum allowable MB concentration (Sm), and the shape factors (n and m) have been 7.37 mg gcell-1 h-1, 32.13 mg/L, 158.8 mg/L, 0.27, and 0.76, respectively.
Show more [+] Less [-]Bioremediation of gasoil by indigenous bacterial strains
2017
Ghavidel, Akbar | Naji Rad, Sumayyah | Alikhani, Hosein Ali
Petroleum refining industries produce large amounts of toxic effluents, causing environmental pollution. Iran is an oil-rich country that encounters oil pollution in its soil and water. Bioremediation of these pollutants is an appropriate solution to tackle them, compared to physical and chemical remediation methods. There are some factors that increase the rate of biodegradation; therefore, this study aims to determine the rate of gasoil bioremediation by two indigenous bacterial isolates (from oil-contaminated soils of an oil refinery south of Tehran) in two different media, namely soil and soil-sawdust mixture. The two superior indigenous bacteria has been isolated through three steps with results indicating that in an optimal environmental condition (temperature= 27±2 °C, humidity of 60%, water holding capacity, and daily manual aeration), bacterial isolates are able to degrade about 78.87% and 93.53% of gasoil during 45 days in soil and soil-sawdust mixture media, respectively. These results imply the role of sawdust in improving aeration, water holding capacity, and-consequently- increasing bioavailability of gasoil to bacteria.
Show more [+] Less [-]Growth-phase dependent biodesulfurization of Dibenzothiophene by Enterobacter sp. strain NISOC-03
2017
Papizadeh, Moslem | Roayaei Ardakani, Mohammad | Motamedi, Hossein
Petroleum-polluted soil samples from Ahvaz oilfield were enriched, using three methods to detect microorganisms with different dibenzothiophene degradation capabilities. Strain NISOC-03, a nitrate-reducing, oxidase negative, catalase, citrate, and urease positive, gram negative rod, showed interesting dibenzothiophene desulfurization behavior, designated as Entreobacter sp. strain NISOC-03 based on phenotype and genotype analyses. Gas chromatography, biomass measurement, and Gibb’s assay showed that in the presence of benzoate as the carbon source, strain NISOC-03 utilized 64% of 0.8 mM dibenzothiophene, producing 0.27 mM phenyl phenol during the exponential growth phase, though the produced phenyl phenol was degraded in the stationary growth phase. In the presence of glucose as the carbon source, however, strain NISOC-03 metabolized only 19.6% of 0.8 mM dibenzothiophene. Furthermore, replacing glucose with ethanol or glycerol led to the same reduction of the dibenzothiophene utilization. It is thus concluded that the chemistry of the potential carbon source(s) in the culture medium has a significant influence on the quality and the rate of dibenzothiophene metablization, and the enrichment designation has a very vital effect on the biodegradation efficiency of the isolated microorganisms.
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