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Diversity and predicted inter- and intra-domain interactions in the Mediterranean Plastisphere
2021
Amaral-Zettler, Linda A. | Ballerini, Tosca | Zettler, Erik R. | Asbun, Alejandro Abdala | Adame, Alvaro | Casotti, Raffaella | Dumontet, Bruno | Donnarumma, Vincenzo | Engelmann, Julia C. | Frère, Laura | Mansui, Jeremy | Philippon, Marion | Pietrelli, Loris | Sighicelli, Maria
This study investigated the biogeography, the presence and diversity of potentially harmful taxa harbored, and potential interactions between and within bacterial and eukaryotic domains of life on plastic debris in the Mediterranean. Using a combination of high-throughput DNA sequencing (HTS), Causal Network Analysis, and Scanning Electron Microscopy (SEM), we show regional differences and gradients in the Mediterranean microbial communities associated with marine litter, positive causal effects between microbes including between and within domains of life, and how these might impact the marine ecosystems surrounding them. Adjacent seas within the Mediterranean region showed a gradient in the microbial communities on plastic with non-overlapping endpoints (Adriatic and Ligurian Seas). The largest predicted inter-domain effects included positive effects of a novel red-algal Plastisphere member on its potential microbiome community. Freshwater and marine samples housed a diversity of fungi including some related to disease-causing microbes. Algal species related to those responsible for Harmful Blooms (HABs) were also observed on plastic pieces including members of genera not previously reported on Plastic Marine Debris (PMD).
Show more [+] Less [-]Prokaryotic footprints in urban water ecosystems: A case study of urban landscape ponds in a coastal city, China
2018
Hu, Anyi | Li, Shuang | Zhang, Lanping | Wang, Hongjie | Yang, Jun | Luo, Zhuanxi | Rashid, Azhar | Chen, Shaoqing | Huang, Weixiong | Yu, Chang-Ping
The urban water ecosystems, such as the landscape ponds are commonly considered under the influence of anthropogenic disturbances, which can lead to the deterioration of the water quality. The prokaryotic communities are considered as one of the best indicators of the water quality. However, there are significant gaps in understanding the ecological processes that shape the composition and function of prokaryotic communities in the urban water ecosystems. Here, we investigated the biogeographic distribution of prokaryotic assemblages in water environments including landscape ponds, drinking water reservoirs, influents (IFs) and effluents (EFs) of wastewater treatment plants of a coastal city (Xiamen), China, by using 16S rDNA amplicon sequencing. Our results indicated that the ponds had higher α-diversity of prokaryotic communities than those in the reservoirs, while there were significant variations in the community compositions among ponds, reservoirs, IFs and EFs. Moreover, ponds harbored a significantly higher proportion of sewage- and fecal-indicator taxa than those in the reservoirs, suggesting the occurrence of exogenous pollution in the urban ponds. Null model analysis revealed that dispersal limitation was the main ecological processes resulting in the divergence of prokaryotic community compositions between ponds and other environments, while dispersal limitation and variable selection played an essential role in the formation of unique prokaryotic assemblages in the reservoirs. Function predication analysis demonstrated that the ponds shared more similar functional profiles with IFs or EFs (e.g., chemoheterotrophy, fermentation, chlorate reducers, nitrate reduction and respiration) than the reservoirs, whereas dominance of photoautotrophy was observed in the reservoirs. Overall, this study provides a profound insight of the ecological mechanisms underlying the responses of prokaryotic communities in the urban landscape ponds to the anthropogenic disturbances.
Show more [+] Less [-]Integrated multi-biomarker responses in two dreissenid species following metal and thermal cross-stress
2016
Potet, Marine | Devin, Simon | Pain-Devin, Sandrine | Rousselle, Philippe | Giambérini, Laure
With current global changes, the combination of several stressors such as temperature and contaminants may impact species distribution and ecosystem functioning. In this study, we evaluated the combined impact of two metals (Ni and Cr) with a thermal stress (from 12 to 17 °C) on biomarker responses in two bivalves, Dreissena rostriformis bugensis and Dreissena polymorpha. Biomarkers are informative tools to evaluate exposure and effects of stressors on organisms. The set of 14 biomarkers measured here was representative of both physiologic (filtration activity) and cellular antioxidant and detoxification mechanisms. Our aim was to study the response pattern of both species, and its meaning in terms of invasive potential. The implications for the use of these mussels in environmental monitoring are also discussed. Results evidenced that the two species do not respond to multiple stressors in the same way. Indeed, the effects of contamination on biomarker responses were more marked for D. polymorpha, especially under nickel exposure. While we cannot conclude as to the effect of temperature, invasiveness could be influenced by species sensitivity to contaminants. The physiological and cellular differences between D. polymorpha and D. r. bugensis might also be of concern for environmental risk assessment. The two species present differential bioaccumulation patterns, filtration activity and cellular biomarker responses. If D. polymorpha populations decline, their substitution by D. r. bugensis for biomonitoring or laboratory studies will not be possible without a deeper understanding of biomarker responses of the new invasive.
Show more [+] Less [-]Plastisphere in freshwaters: An emerging concern
2021
Barros, Juliana | Seena, Sahadevan
Plastisphere, an ecosystem of microbes thriving on floating plastic debris, has been extensively studied in marine waters since 2013. Currently, very little is known about the freshwater plastisphere. This review seeks to provide a broad insight into the freshwater science of plastisphere in the light of marine plastisphere, including research gaps, suggestions, and rising concerns, which would be of interest to the public, policymakers, and stakeholders. Given that freshwaters are endangered ecosystems, it is imperative to understand the role and impact of plastisphere on freshwaters. Plastic debris, especially microplastics (size <5 mm) in freshwater ecosystems, provide a stable, persistent, and buoyant substrate for microbes. Although current evidence suggests that freshwater environmental conditions and microplastics' physical and chemical properties significantly influence microbial colonisation, its role and integration in the aquatic ecosystems are unknown. Considering that the plastisphere biodiversity is unique, we seek to establish why and how many species co-exist in the plastisphere. Evaluating such fundamental questions should advance our basic understanding of the resilience of plastisphere to the changing environment. Plastisphere microbes, including the pathogenic bacteria, were found in both systems demonstrating their ability to survive on the plastic fragments from one ecosystem to another. A significant concern regarding plastisphere is the potential freshwater dispersal of anthropogenic pollutants and invasive or pathogenic species. Notably, microplastics aggregates may serve as a food source for grazers, which opens the question of the extent to which it can impact freshwater food webs. To gain a thorough understanding of the interplay between microplastics and the biogeochemical cycle, further insight into plastisphere microbes’ functional role is needed. This would shed light on the unconsidered freshwater elemental cycling pathways. Given the complexity and universal nature of the plastisphere, strong interdisciplinary global research initiatives or networks are required to address the emerging concerns of plastisphere in freshwaters.
Show more [+] Less [-]Determining suitable fish to monitor plastic ingestion trends in the Mediterranean Sea
2019
Bray, Laura | Digka, Nikoletta | Tsangaris, Catherine | Camedda, Andrea | Gambaiani, Delphine | de Lucia, Giuseppe Andrea | Matiddi, Marco | Miaud, Claude | Palazzo, Luca | Pérez-del-Olmo, Ana | Raga, Juan Antonio | Silvestri, Cecilia | Kaberi, Helen
The presence of marine litter is a complex, yet persistent, threat to the health and biodiversity of the marine environment, and plastic is the most abundant, and ubiquitous type of marine litter. To monitor the level of plastic waste in an area, and the prospect of it entering the food chain, bioindicator species are used extensively throughout Northern European Seas, however due to their distribution ranges many are not applicable to the Mediterranean Sea. Guidance published for the Marine Strategy Framework Directive suggests that the contents of fish stomachs may be analyzed to determine trends of marine plastic ingestion. In order to equate transnational trends in marine plastic ingestion, the use of standardized fish species that widely occur throughout the basin is favoured, however for the Mediterranean Sea, specific species are not listed. Here we propose a methodology to assess how effective Mediterranean fish species, that are known to have ingested marine plastic, are as bioindicators. A new Bioindicator Index (BI) was established by incorporating several parameters considered important for bioindicators. These parameters included species distribution throughout the Mediterranean basin, several life history traits, the commercial value of each species, and the occurrence of marine litter in their gut contents. By collecting existing data for Mediterranean fish, ranked scores were assigned to each trait and an average value (BI value) was calculated for each species. Based on their habitat preferences, Engraulis encrasicolus (pelagic), Boops boops (benthopelagic), three species of Myctophidae (Hygophum benoiti, Myctophum punctatum and Electrona risso) (mesopelagic), Mullus barbatus barbartus (demersal) and Chelidonichthys lucerna (benthic), were identified as currently, the most suitable fish for monitoring the ingestion of marine plastics throughout the Mediterranean basin. The use of standardized indicator species will ensure coherence in the reporting of marine litter ingestion trends throughout the Mediterranean Sea.
Show more [+] Less [-]Isolation of 12 microsatellite markers following a pyrosequencing procedure and cross-priming in two invasive cryptic species, Alexandrium catenella (group IV) and A. tamarense (group III) (Dinophyceae)
2014
Laporte, Martin | Shao, Zhaojun | Berrebi, Patrick | Laabir, Mohamed | Abadie, Eric | Faivre, Nicolas | Rieuvilleneuve, Fabien | Masseret, Estelle
Alexandrium catenella (group IV) and Alexandrium tamarense (group III) (Dinophyceae) are two cryptic invasive phytoplankton species belonging to the A. tamarense species complex. Their worldwide spread is favored by the human activities, transportation and climate change. In order to describe their diversity in the Mediterranean Sea and understand their settlements and maintenances in this area, new microsatellite markers were developed based on Thau lagoon (France) samples of A. catenella and A. tamarense strains. In this study twelve new microsatellite markers are proposed. Five of these microsatellite markers show amplifications on A. tamarense and ten on A. catenella. Three of these 12 microsatellite markers allowed amplifications on both cryptic species. Finally, the haplotypic diversity ranged from 0.000 to 0.791 and 0.000 to 0.942 for A. catenella and A. tamarense respectively.
Show more [+] Less [-]Tools and constraints in monitoring interactions between marine litter and megafauna: Insights from case studies around the world
2019
Claro, F. | Fossi, M.C. | Ioakeimidis, C. | Baini, M. | Lusher, A.L. | Mc Fee, W. | McIntosh, R.R. | Pelamatti, T. | Sorce, M. | Galgani, F. | Hardesty, B.D.
Adverse impacts of marine litter is documented on >1400 species, including marine megafauna (fish, birds, sea turtles and mammals). The primary impacts include ingestion and entanglement, and there is increasing concern about chemical contamination via ingestion. Numerous survey approaches and monitoring programs have been developed and implemented around the world. They may aim to provide data about parameters such as species distribution and interactions with anthropogenic activities. During the Sixth International Marine Debris Conference, a session was dedicated to the tools and constraints in monitoring interactions between litter and megafauna. In the present paper, we summarize 7 case studies which discuss entanglement and ingestion including macro- and micro-debris in several taxa and across multiple geographic regions. We then discusses the importance of tools and standardizing methods for assessment and management purposes, in the context of international environmental policies and marine litter strategies.
Show more [+] Less [-]Colonization of floats from submerged derelict fishing gears by four protected species of deep-sea corals and barnacles in the Strait of Messina (central Mediterranean Sea)
2019
Battaglia, Pietro | Consoli, Pierpaolo | Ammendolia, Giovanni | D'Alessandro, Michela | Bo, Marzia | Vicchio, Teresa Manuela | Pedà, Cristina | Cavallaro, Mauro | Andaloro, Franco | Romeo, Teresa
The distribution of floating litter in marine waters, influenced by currents and wind drag, often determines the dispersal of its encrusting fauna. In the present paper, we observed for the first time the colonization of rafting floats from abandoned, lost or derelict fishing gears (ALDFG) by the four protected deep-sea species: Errina aspera, Desmophyllum pertusum, Madrepora oculata Pachylasma giganteum.Overall, 41 floats, colonized by deep benthic species, were found stranded on the shore of the Sicilian coast of the Strait of Messina, between 2016 and 2019. Species composition, number and occurrence of colonizing organisms were analyzed. On the basis of the species composition (the association between E. aspera, P. giganteum and Megabalanus tulipiformis), the knowledge on their ecology, biogeography, path of local currents, it was possible to define that the area of origin of the most part of these fishing net floats was the Strait of Messina.
Show more [+] Less [-]Biodiversity hotspot for marine invertebrates around the Dokdo, East Sea, Korea: Ecological checklist revisited
2017
Song, Sung Joon | Park, Jinsoon | Ryu, Jongseong | Rho, Hyun Soo | Kim, Wŏn | Khim, Jong Seong
We extensively reviewed the macrozoobenthos around Dokdo, Korea, by analyzing metadata collected over the past 50years. The Dokdo macrozoobenthos was represented by 578 species belonging to 243 families from 12 phyla, where four major phyla (or classes) collectively accounted for 86% to total. Mollusks, arthropods, and cnidarians were semi-equally occurred in intertidal and subtidal areas, while polychetes dominated the subtidal zone. The northern most region of Dokdo had the greatest biodiversity (173 species). The taxonomic distinctness analysis (delta+) indicated a close association between species by region, although the number of species varied greatly. About half of the species did not occur cross the locations (n=20), indicating strong habitat preferences of Dokdo macrofaunal assemblages. Overall, the diversity of Dokdo was greater than that of Ulleung Island (east coast), but comparable to that of the well-developed tidal flats in the western Korean waters, highlighting its status as a biodiversity hotspot.
Show more [+] Less [-]A century of introductions by coastal sessile marine invertebrates in Angola, South East Atlantic Ocean
2017
South Atlantic studies referring to non-native taxa are mostly restricted to Argentinean, Brazilian, and South African coasts. In this study we examined the literature to provide a list of sessile marine invertebrates along the Angolan coast, to infer its introduction status according to their biogeographical distribution and natural history. We reported 29 non-native and 7 cryptogenic species, a small number when compared to other South Atlantic regions of similar extension. Half of the non-native species were reported for Luanda. The majority of the introduced species had a northern hemisphere origin, a consequence of the main introduction route being from the North Atlantic/Mediterranean Sea during the Portuguese colonization. This is the first comprehensive assessment of this kind for the Angolan coast and the diversity of introduced species is certainly underestimated. Regular and rigorous assessments and monitoring of introduced marine species will help to understand the vectors, routes and time of introductions.
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