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Isolation of 12 microsatellite markers following a pyrosequencing procedure and cross-priming in two invasive cryptic species, Alexandrium catenella (group IV) and A. tamarense (group III) (Dinophyceae)
2014
Laporte, Martin | Shao, Zhaojun | Berrebi, Patrick | Laabir, Mohamed | Abadie, Eric | Faivre, Nicolas | Rieuvilleneuve, Fabien | Masseret, Estelle
Alexandrium catenella (group IV) and Alexandrium tamarense (group III) (Dinophyceae) are two cryptic invasive phytoplankton species belonging to the A. tamarense species complex. Their worldwide spread is favored by the human activities, transportation and climate change. In order to describe their diversity in the Mediterranean Sea and understand their settlements and maintenances in this area, new microsatellite markers were developed based on Thau lagoon (France) samples of A. catenella and A. tamarense strains. In this study twelve new microsatellite markers are proposed. Five of these microsatellite markers show amplifications on A. tamarense and ten on A. catenella. Three of these 12 microsatellite markers allowed amplifications on both cryptic species. Finally, the haplotypic diversity ranged from 0.000 to 0.791 and 0.000 to 0.942 for A. catenella and A. tamarense respectively.
Show more [+] Less [-]Unexpected abundance and long-term relative stability of the brown alga Cystoseira amentacea, hitherto regarded as a threatened species, in the north-western Mediterranean Sea
2014
Thibaut, Thierry | Blanfuné, Aurélie | Markovic, Laurent | Verlaque, Marc | Boudouresque, Charles F. | Perret-Boudouresque, Michèle | Maćic, Vesna | Bottin, Lorraine
Cystoseira amentacea is a Mediterranean endemic alga thriving on very shallow rocky substrates. It has been considered as a threatened species, having experienced a steady decline and is therefore protected by international conventions. The historical distribution of the species has been assessed along the French Mediterranean coast, on the basis of 467 articles and herbarium vouchers. We have produced an accurate map of its current distribution and abundance along 1832km of coastline, through in situ surveys. C. amentacea was observed along 1125km of shoreline, including 33% of almost continuous or continuous belt. In most of its range, there is no evidence of loss, except in 4 areas of Provence, French Riviera and Corsica. A significant relation was found between the absence or low abundance of C. amentacea and the vicinity of ports and large sewage outfalls. The status of conservation of the species should therefore be reassessed.
Show more [+] Less [-]ALien Biotic IndEX (ALEX) – A new index for assessing impacts of alien species on benthic communities
2014
Çinar, Melih Ertan | Bakir, Kerem
Biotic indices are mainly aimed at assessing levels of deterioration caused by chemical or organic pollution. However, no biotic index to date has been developed to detect impacts of alien species on benthic communities. In this paper, a new biotic index, namely ALEX, is proposed to address the objectives of the Water Framework Directive and was tested in Mersin Bay (Levantine Sea, Turkey). Species were divided into four biogeographic groups, namely native species, casual species, established species and invasive species, and the metric considers the relative importance of these groups in samples. The index classified the ecological status of some stations which are shallow, and close to harbor and river mouths as bad or poor in February and October. The ALEX values were positively and significantly correlated with total nitrogen, silicate and silt percentage in sediment, and negatively correlated with depth and the distance from the harbor.
Show more [+] Less [-]Isolation of 12 microsatellite markers following a pyrosequencing procedure and cross-priming in two invasive cryptic species, Alexandrium catenella (group IV) and A. tamarense (group III) (Dinophyceae)
2014
Laporte, Martin | Shao, Zhaojun | Berrebi, Patrick | Laabir, Mohamed | Abadie, Eric | Faivre, Nicolas | Rieuvilleneuve, Fabien | Masseret, Estelle
Alexandrium catenella (group IV) and Alexandrium tamarense (group III) (Dinophyceae) are two cryptic invasive phytoplankton species belonging to the A. tamarense species complex. Their worldwide spread is favored by the human activities, transportation and climate change. In order to describe their diversity in the Mediterranean Sea and understand their settlements and maintenances in this area, new microsatellite markers were developed based on Thau lagoon (France) samples of A. catenella and A. tamarense strains. In this study twelve new microsatellite markers are proposed. Five of these microsatellite markers show amplifications on A. tamarense and ten on A. catenella. Three of these 12 microsatellite markers allowed amplifications on both cryptic species. Finally, the haplotypic diversity ranged from 0.000 to 0.791 and 0.000 to 0.942 for A. catenella and A. tamarense respectively.
Show more [+] Less [-]Comparison of species sensitivity distributions for species from China and the USA
2014
Wang, Xiaonan | Zhenguang, Yan | Liu, Zhengtao | Zhang, Cong | Wang, Weili | Li, Handong
China has recently commenced water quality criteria (WQC) research using the species sensitivity distribution (SSD) method; however, it is difficult to obtain sufficient native species toxicity data for thousands of contaminants. In this study, the feasibility of using non-native toxicity data in deriving native WQC was analyzed. We constructed SSDs based on acute toxicity data of species from China and the USA for eight priority pollutants, and compared the sensitivities of different taxonomic groups between the two countries. The results showed that the SSD method of log-logistic distribution fit the toxicity data of different taxa well. The comparison of sensitivity distribution and hazardous concentration for 5 % of the species and 50 % of the species showed that there was no significant difference between Chinese and American taxa. It could be feasible to use toxicity data from the USA to provide a temporary way to protect organisms in China in emergency situations or for management of priority pollutants when native toxicity data are lacking.
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