Research of phytoplankton is conducted in different seasons during 2004 and 2005. River Bojana and Ada Bojana are analyzed on several locations. The objective of research is based on algae as reliable indicator of water quality and ecological condition of water. We would like to show the need for protection of these water ecosystems from permanent contamination, basically sewage waste. Saprobiotic index is determined by Gulyas Pal method. Pantle Buck method is used to calculate saprobiotic level. Chlorophyll A is analyzed by spectrophotometer. Presence of Cyanophytae was established.

The salt pond Velika Slatina is the old meander of the river Tamis (Serbia). The ecosystem is periodically fill with moderate salt water. Phytoplankton production was 10 times bigger in 2003 than 2006. Ecological conditions were unfavourable for development of phytoplankton community. Diatoms show as the most abundant component in 2003, but euglenoids were in 2006, when bloom of Gloeotrichia natans f. bucharica Kissel was recorded. Results of biomass analysis also show dominant role of diatoms in 2003 and euglenoids in 2006.

Influence of eutrophication to the phytoplankton community were studied in the inner part of Boka Kotorska Bay (Kotor Bay and Risan Bay) from September 2003 to August 2004. Kotor Bay and Risan Bay is very interesting area because the influence of natural and anthropogenic eutrophication are mixed very often. Microphytoplankton density is high (greater than 10**6 cells/cubic dm) what is characteristic eutrophic area, to the highest eutrophic area (greater than 10**7 cells/cubic dm). These values we stated in the surface, because in this layer were the best conditions. In same time we stated very high values: SiO2, oxygen saturation and chlorophyll a. The conclusion is: Boka Kotorska Bay and especially Kotor Bay (as a part of Boka Kotorska) has to be protected of dangerous consequences such as blooming. It is needed to regulate wastewater, their purification and permanent control physico-chemical and biological parameters, and especially phytoplankton component.