Caribbean reefs have experienced unprecedented changes in the past 40years. A major hypothesis to explain shifts in reef community composition relates to declining herbivory. This hypothesis was developed largely based on observations of Jamaican reefs from the 1980s onward, but it is widely held to be relevant regionally. We use a region-wide dataset on benthic composition to examine how well the pattern of ecological change on Jamaican reefs is mirrored by other Caribbean reefs. The extent to which macroalgal cover exceeds coral cover on Jamaican reefs is an order of magnitude more extreme than seen elsewhere. We suggest that Jamaican reefs are not representative of the degradation trajectory of Caribbean reefs and management based on the Jamaican experience may not be relevant elsewhere. However, the recovery of Jamaican reefs following the return of urchins gives us hope that Caribbean reefs are more resilient to catastrophic disturbances than previously thought.

Corals in the Arabian/Persian Gulf endure summer temperatures of up to 36°C, making them ideal subjects to study the mechanisms underlying thermal tolerance. Unexpectedly, we found the “generalist” Symbiodinium clade C3 to be the prevalent symbiont among seven coral species from Abu Dhabi (UAE) waters. Moreover, C3 represented the only dominant symbiont type in Porites spp. from this region. The “thermotolerant” symbionts D1a and C15 were not encountered, indicating that the association with these symbionts cannot be the sole reason for the heat tolerance of Gulf corals. The association of Porites lobata with specific symbiont types (C3 vs. C15) in samples from habitats with very different temperature regimes (Abu Dhabi vs. Fiji) remained unaffected by laboratory culture. During temperature stress experiments specimens from both locations strongly downregulated green fluorescent protein (GFP)-like pigments. However, the Abu Dhabi samples were less prone to bleaching and showed lower mortality.

Historically coral reefs of Bahrain were among the most extensive in the southern basin of the Arabian Gulf. However, Bahrain’s reefs have undergone significant decline in the last four decades as a result of large-scale coastal development and elevated sea surface temperature events. Here we quantitatively surveyed six sites including most major coral reef habitats around Bahrain and a reef located 72km offshore. Fleshy and turf algae now dominate Bahrain’s reefs (mean: 72% cover), and live coral cover is low (mean: 5.1%). Formerly dominant Acropora were not observed at any site. The offshore Bulthama reef had the highest coral cover (16.3%) and species richness (22 of the 23 species observed, 13 of which were exclusive to this site). All reefs for which recent and historical data are available show continued degradation, and it is unlikely that they will recover under continuing coastal development and projected climate change impacts.

Certain coral reef systems north of the Arabian Gulf are characterized by corals with a unique ability to thrive and flourish despite the presence of crude oil continuously seeping from natural cracks in the seabed. Harboring oil-degrading bacteria as a part of the holobiont has been investigated as a potential mechanism of adaptation and survival for corals in such systems. The use of conventional and molecular techniques verified a predominance of bacteria affiliated with Gammaproteobacteria, Actinobacteria and Firmicutes in the mucus and tissues of Acropora clathrata and Porites compressa. These bacteria were capable of degrading a wide range of aliphatic (C9–C28) aromatic hydrocarbons (Phenanthrene, Biphenyl, Naphthalene) and crude oil. In addition, microcosms supplied with coral samples and various concentrations of crude oil shifted their bacterial population toward the more advantageous types of oil degraders as oil concentrations increased.

Breakwaters are widely used in coastal development. Breakwaters can alter habitats by undermining shallow coastal ecosystems, especially coral reefs. However, recent studies indicate that mature breakwaters can have well-developed corals and coral-associated fishes. Breakwaters with colonized corals may act as surrogates of natural coral reefs against the global coral crisis. Here, we examined the composition of corals, fishes, and benthic biota/abiota between natural reefs and mature breakwaters to evaluate the possibility of breakwaters supplementing natural reefs. We found equal or higher coral cover, fish abundance, and species richness on breakwaters. Conversely, differential coral growth forms and fish assemblages on mature breakwaters suggested the irreplaceability of natural reefs. Corals and coral reef fishes on mature man-made structures, however, may improve the resistance and resilience of coral reefs. Conclusively, despite high coral cover on mature man-made structures appropriate management (e.g., marine reserves) is still necessary to sustain the coral reefs.

In Brazil, where reefs occur in markedly turbid environments, the relationship between sedimentation/organic matter and corals is poorly known. Thus, the ex situ effects of sediment with and without organic matter over the ΔF/Fm and physical state of Mussismilia braziliensis were analyzed. The ΔF/Fm and coral physical state, evaluated through the susceptibility index to sedimentation (SI), were measured in seven colonies exposed to sedimentation (0–450mgcm−2day−1) free of organic matter after 45days of exposure, and in 12 colonies exposed to sedimentation (0–500mgcm−2day−1) with organic matter content (10%), in which case ΔF/Fm was measured after 72h and SI after 120h. In both cases there were effects of increasing sedimentation on the SI with no effect on ΔF/Fm. Despite the tolerance to high sedimentation rates shown by this coral, we noted that the presence of organic matter might reduce its tolerance to sedimentation stress.

Multivariate analysis revealed distinct sub-regional coral communities among the southern Persian Gulf, Strait of Hormuz, and Gulf of Oman. Differences in community structure among locations were associated with considerable spatial heterogeneity in oceanic conditions, and strong directional environmental gradients. Despite clear community differences, considerable changes to coral community structure have occurred throughout the northeastern Arabian Peninsula as compared with previous studies. The most dramatic of these are the apparent changes from Acropora dominated to poritid and faviid dominated communities, particularly in the southern Persian Gulf and Strait of Hormuz. Although temperature and salinity have previously been cited as the major environmental factors structuring coral communities around the region, additional environmental parameters, including chlorophyll-a, surface currents and winds are shown to be important in structuring reef communities throughout the northeastern Arabian Peninsula.

Sediment from land use increases water turbidity and threatens the health of inshore coral reefs. This study performed experiments with a damselfish, Pomacentrus moluccensis, in four sediment treatments, control (0mgl−1), 10mgl−1(∼1.7NTU), 20mgl−1(∼3.3NTU) and 30mgl−1 (∼5NTU), to determine when sediment triggers a change in habitat use and movement. We reviewed the literature to assess how frequently P. moluccensis would experience sub-optimal sediment conditions on the reef. Preference for live coral declined from 49.4% to 23.3% and movement between habitats declined from 2.1 to 0.4times between 20mgl−1 and 30mgl−1, suggesting a sediment threshold for behavioral changes. Inshore areas of the Great Barrier Reef, P. moluccensis may encounter sub-optimal conditions between 8% and 53% of the time. Changes in these vital processes may have long-term effects on the persistence of populations, particularly as habitat loss on coral reefs increases.

Corals in the Gulf 1Although virtually all standard maps use the term “Persian Gulf”, the term “Arabian Gulf” has become commonly used in publications of studies conducted in the waters of Arabian Peninsula countries. The nonpolitical generic term “Gulf” is therefore used here for this marine area.1 withstand summer temperatures up to 10°C higher than corals elsewhere and have recovered from extreme temperature events in 10years or less. This heat-tolerance of Gulf corals has positive implications for the world’s coral populations to adapt to increasing water temperatures. However, survival of Gulf corals has been severely tested by 35–37°C temperatures five times in the last 15years, each time causing extensive coral bleaching and mortality. Anticipated future temperature increases may therefore challenge survival of already highly stressed Gulf corals. Previously proposed translocation of Gulf corals to introduce temperature-adapted corals outside of the Gulf is assessed and determined to be problematical, and to be considered a tool of last resort. Coral culture and transplantation within the Gulf is feasible for helping maintain coral species populations and preserving genomes and adaptive capacities of Gulf corals that are endangered by future thermal stress events.