Organ carbon are often used to enhance denitrification in wastewater treatment. However, their possible effects on microbial interactions are very limited. In this work, an anaerobic ammonium oxidation (anammox) coupled with sulfur autotrophic/mixotrophic denitrification (SAD/SMD) system was used to investigate the changes in microbial interactions among the microbial communities under different nutrient condition. The removal efficiency of total nitrogen increased from 70% (SAD) to 97% (SMD). The Illumina sequencing analysis indicated that Planctomycetes was the most dominant bacterial phylum in anammox system. Thiobacillus and Sulfurimonas, two typical autotrophic denitrifiers, decreased significantly from 31.9% to 17.7%–12.2% and 9.3%, when the nutrient condition changed from SAD to SMD (P < 0.05). Meanwhile, some heterotrophic or mixotrophic denitrifying bacteria, including Gemmobacter, Pseudomonas and Thauera increased significantly (P < 0.05). Molecular ecological network (MEN) analysis showed that the addition of organic carbon substantially altered the overall architecture of the network. Compared with SAD, the SMD had shorter path lengths, indicating higher transfer efficiencies of information and materials among different microorganism. The addition of organic carbon increased the microbial interaction complexity of Proteobacteria. The links of Thiobacillus, which was a typical sulfur-oxidizing autotrophic denitrifying bacteria, significantly reduced (P < 0.05) with the addition of organic carbon, while the links of the heterotrophic bacteria Geobacter significantly increased (P < 0.05). This study provided new insights into our understanding of the shifts in the bacteria community and their microbial interactions under different nutrient conditions (SAD and SMD) in sulfur-supported denitrification system.

Plants, that naturally inhabit arsenic-contaminated areas may be used for effective arsenic-uptake from soil. The efficiency of this process may be increased by the reducing arsenic phytotoxicity and stimulating the activity of indigenous soil microbiota. As we showed, it can be achieved by the bioaugmenting of soil with arsenite-oxidizing bacteria (AOB). This study aimed to investigate the influence of soil bioaugmentation with AOB on the structure, quantity, and activity of the indigenous soil microbiota as well as to estimate the effect of such changes on the morphology, growth rate, and arsenic-uptake efficiency of plants. Plants-microbes interactions were investigated using the effective arsenites oxidizer Ensifer sp. M14 and the native plant alfalfa. The experiments were performed both in potted garden soil enriched with arsenic and in highly arsenic polluted, natural soil. The presence of M14 strain in soil contributed to the increase both in plants growth intensity and arsenic-uptake efficiency with regard to the soil without M14. After 40 days of plants culture, their average biomass increased by about 60% compared to non-bioaugmented soil, while the arsenic accumulation increased more than two times. The soil bioaugmentation contributed also to the increase in the quantity and activity of soil microorganisms without disturbing the natural microbial community structure. In the bioaugmented soil, the noticable increase in the quantity of heterotrophic, denitrifying, nitrifying and cellulolytic bacteria as well as in the activity of dehydrogenases and cellulases were observed. Soil bioaugmentation with M14 enables the application of native and commonly occurring plant species for enhancing the treatment of arsenic-contaminated soil. This in situ strategy may constitute a valuable alternative both to the chemical and physical methods of arsenic removal from soil and to the biological ways based on the arsenic hyperaccumulating plants and/or the arsenic mobilizing bacteria.

The insufficient removal of pollutants and bioelectricity production have become a bottleneck for high-concentration saline wastewater treatment through microbial fuel cell (MFC) technology. Herein, a novel supercapacitor MFC (SC-MFC) was constructed with carbon nanofibers composite electrodes to investigate pollutant removal ability, power generation, and electrochemical properties using real landfill leachate. The possible extracellular electron transfer and nitrogen element conversion pathways in the bioanode were also analyzed. Results showed that the SC-MFC had higher pollutant removal rates (COD: 59.4 ± 1.2%; NH₄⁺-N: 78.2 ± 1.6%; and TN: 77.8 ± 1.2%), smaller internal impedance Rₜ (∼6 Ω), higher exchange current density i₀ (2.1 × 10⁻⁴ A cm⁻²), and a larger catalytic current j₀ (704 μA cm⁻²) with 60% leachate than those with 10% and 20% leachate, resulting in a power output of 298 ± 22 mW m⁻². Ammonium could be incorporated by chemoautotrophic bacteria to produce organic compounds that could be further utilized by heterotrophs to generate power when biodegradable organic matters are depleted. Three conversion pathways of nitrogen might be involved, including NH₄⁺ diffusion from anode to cathode chamber, nitrification, and the denitrification process. Additionally, cyclic voltammetry tests showed that both the direct electron transfer (DET) and the mediator electron transfer in bioanode were involved and dominated by DET. The microbial analysis revealed that the bioanode was dominated by salt-tolerant denitrifying bacteria (38.5%), which was deduced to be the key functional microorganism. The electrochemically active bacteria decreased significantly from 61.7% to 4% over three stages of leachate treatment. Overall, the SC-MFC has demonstrated the potential for wastewater treatment along with energy harvesting and provides a new avenue toward sustainable leachate management.

A novel denitrifying bacterium YSF15 was isolated from the Lijiahe Reservoir in Xi’an and identified as Comamonas sp. It exhibited excellent nitrogen removal ability under low C/N conditions (C/N = 2.5) and 94.01% of nitrate was removed in 18 h, with no accumulation of nitrite. PCR amplification and nitrogen balance experiments were carried out, showing that 68.92% of initial nitrogen was removed as gas products and the nitrogen removal path was determined to be NO3−-N→NO2−-N→NO→N2O→N2. Scanning electron microscopy and three-dimensional fluorescence spectroscopy were used to track extracellular polymeric substances (EPS). The results show that complete-denitrification under low C/N conditions is associated with EPS, which may provide a reserve carbon source in extreme environments. These findings reveal that Comamonas sp. YSF15 can provide novel basic materials and a theoretical basis for wastewater bioremediation under low C/N conditions.

Potassium (K) fertilizer plays an important role in increasing crop yield, quality, and nitrogen use efficiency. However, little is known about its environmental impacts, such as its effects on emissions of the greenhouse gas nitrous oxide (N₂O). A nitrogen-15 (¹⁵N) tracer laboratory experiment was therefore performed in an acidic agricultural soil in the suburbs of Wuhan, central China, to determine the effects of K fertilizer on N₂O emissions and nitrification/denitrification product ratios under N fertilization. During 15-d incubation periods with a fixed initial N concentration (80 mg kg⁻¹), K application increased average N₂O emission rates significantly (1.6–10.8-fold) compared to the control treatment. N₂O emissions derived from nitrification and denitrification both increased in K-treated soil, and denitrification contributed more to the increase; its contribution ratio rose from 32% without K fertilizer to 53% with 300 mg kg⁻¹ of K applied. The increase in N₂O emissions under K fertilization is probably due to an increase in the activity of denitrifying microorganisms and acid-resistant nitrifying microorganisms caused by higher K⁺ concentrations and lower soil pH. Combined treatment with potassium chloride (KCl) and N fertilizer produced lower N₂O emissions than combined treatment with potassium sulfate (K₂SO₄) and N fertilizer during 15-d incubation periods. Our results imply that there are significant interaction effects between N fertilizers and K fertilizers on N₂O emissions. In particular, combining N fertilizers with fertilizers that reduce soil acidity or contain Cl or K ions may significantly affect agricultural N₂O emissions.

Due to the abusive usage of antibiotics in animal husbandry, a large amount of residual antibiotics has been released into the environment, therein posing great threat against both environment security and public health. Therefore, it is of great significance to investigate the toxicity of antibiotics on the widely-applied bioindicator-earthworm. In this work, the physiological parameters and the intestinal bacteria community of Metaphire guillelmi were monitored simultaneously to evaluate their sensitivity to the tetracycline (TC) exposure. As expected, the antioxidant enzyme activity and coelomocyte apoptosis acted fairly well as biomarkers for the TC toxicity. In contrast, the intestinal bacteria of Metaphire guillelmi responded varyingly to different TC doses. When TC concentration increased from 0 to 35.7 μg cm⁻², the percentage of the Proteobacteria phylum declined significantly from 85.5% to 34.4%, while the proportions of the Firmicutes, Planctomycetes and Atinomycete phyla clearly increased (p < 0.05). Meanwhile, the levels of TC resistance genes tetA, tetC, and tetW increased with the increasing TC concentration, in contrast to the declined abundance in denitrifying genes nirS and nosZ (p < 0.05). By analyzing the correlation between the antioxidant enzyme activity and the dominant intestinal bacteria in the worm gut, it is interesting to found that the four dominant bacteria genera Mesorhizobium, Aliihoeflea, Romboutsia, and Nitrospira are the promising bioindicator of TC stress due to their sensitive response. This work shed novel light on evaluating the ecotoxicological risks posed by residual TC in environment by using a combination of physiological parameters and intestinal bacterial activity in earthworms.

Silver (Ag) is released from a range of products and accumulates in agricultural soils as silver sulfide (Ag₂S) through the application of Ag-containing biosolids as a soil amendment. Although Ag₂S is comparatively stable, its solubility increases with salinity, potentially altering its impacts on microbial communities due to the anti-microbial properties of Ag. In this study, we investigated the impacts of Ag on the microbially mediated N cycle in saline soils by examining the relationship between the (bio)availability of Ag₂S and microbial functioning following the application of Ag₂S-containing sludge. Synchrotron-based X-ray absorption spectroscopy (XAS) revealed that the Ag₂S was stable within the soil, although extractable Ag concentrations increased up to 18-fold in soils with higher salinity. However, the extractable Ag accounted for <0.05% of the total Ag in all soils and had no impact on plant biomass or soil bacterial biomass. Interestingly, at high soil salinity, Ag₂S significantly increased cumulative N₂O emissions from 80.9 to 229.2 mg kg⁻¹ dry soil (by 180%) compared to the corresponding control sludge treatment, which was ascribed to the increased abundance of nitrification and denitrification-related genes (amoA, nxrB, narG, napA, nirS, and nosZ) and increased relative abundance of denitrifiers (Rhodanobacter, Salinimicrobium, and Zunongwangia). Together, our findings show that the application of Ag₂S-containing sludge to a saline soil can disrupt the N cycle and increase N₂O emissions from agroecosystems.

Thiocyanate (SCN⁻)-based autotrophic denitrification (AD) has recently been demonstrated as a promising technology that could be integrated with anaerobic ammonium oxidation (Anammox) to achieve simultaneous removal of nitrogen and SCN⁻. However, there is still a lack of a complete SCN⁻-based AD model, and the potential microbial competition/synergy between AD bacteria and Anammox bacteria under different operating conditions remains unknown, which significantly hinders the possible application of coupling SCN⁻-based AD with Anammox. To this end, a complete SCN⁻-based AD model was firstly developed and reliably calibrated/validated using experimental datasets. The obtained SCN⁻-based AD model was then integrated with the well-established Anammox model and satisfactorily verified with experimental data from a system coupling AD with Anammox. The integrated model was lastly applied to investigate the impacts of influent NH₄⁺-N/NO₂⁻-N ratio and SCN⁻ concentration on the steady-state microbial composition as well as the removal of nitrogen and SCN⁻. The results showed that the NH₄⁺-N/NO₂⁻-N ratio in the presence of a certain SCN⁻ level should be controlled at a proper value so that the maximum synergy between AD bacteria and Anammox bacteria could be achieved while their competition for NO₂⁻ would be minimized. For the simultaneous maximum removal (>95%) of nitrogen and SCN⁻, there existed a negative relationship between the influent SCN⁻ concentration and the optimal NH₄⁺-N/NO₂⁻-N ratio needed.

The Yangtze River, which is the largest in Euro-Asian, receives tremendous anthropogenic nitrogen input and is typically characterized by severe eutrophication and hypoxia. Two major processes, denitrification and anaerobic ammonium oxidation (anammox), play vital roles for removing nitrogen global in nitrogen cycling. In the current study, sediment samples were collected from both latitudinal and longitudinal transects along the coastal Yangtze River and the East China Sea (ECS). We investigated community composition and distributions of nosZ gene-encoded denitrifiers by high throughput sequencing, and also quantified the relative abundances of both denitrifying and anammox bacteria by q-PCR analysis. Denitrifying communities showed distinct spatial distribution patterns that were impacted by physical (water current and river runoffs) and chemical (nutrient availability and organic content) processes. Both denitrifying and anammox bacteria contributed to the nitrogen removal in Yangtze Estuary and the adjacent ECS, and these two processes shifted from coastal to open ocean with reverse trends: the abundance of nosZ gene decreased from coastal to open ocean while anammox exhibited an increasing trend based on quantifications of hzsB and 16S rRNA genes. Further correspondence correlation analysis revealed that salinity and nutrients were the main factors in structuring composition and distribution of denitrifying and anammox bacteria. This study improved our understanding of dynamic processes in nitrogen removal from estuarine to open ocean. We hypothesize that denitrification is the major nitrogen removal pathway in estuaries, but in open oceans, low nutrient and organic matter concentrations restrict denitrification, thus increasing the importance of anammox as a nitrogen removal process.

Estuaries are considered hot spots for the production and emissions of nitrous oxide (N2O) and easily occur suspended particles (SPS), however, current understanding about the role of SPS in the N2O emissions from the oxic estuarine waters of lacustrine ecosystems is still limited. In this study, field investigations were performed in the estuaries of hypereutrophic Taihu Lake, and laboratory simulations were simultaneously conducted to ascertain the characteristics of N2O emissions with different SPS concentrations. The results showed that the N2O emission fluxes ranged from 9.75 to 118.38 μg m−2 h−1, indicating a high spatial heterogeneity for the N2O emissions from the estuaries of Taihu Lake. Although the dissolved oxygen (DO) concentrations were up to 7.85 mg L−1 in the estuarine waters, from where the N2O emissions fluxes were approximately three times that of the lake regions. Multiple regression model selected the total nitrogen (TN), SPS, and DO concentrations as the crucial factors influencing the N2O emission fluxes. Particularly for SPS, the simulation results showed that the N2O concentrations increased gradually with the increase in the SPS concentrations of an oxic water column containing 4 mg L−1 of NO3−-N, indicating that a high SPS concentration can accelerate the N2O emissions. It was related to the change of denitrifying bacteria population in the SPS, as evidenced by its significantly positive correlation with N2O emissions (p < 0.01). Our findings will draw attentions to the role of SPS playing in the N2O productions and emissions in eutrophic lakes, and its effect on nitrogen cycle should be considered in the future study.