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Biodegradation of Jet Fuel by Three Gram Negative Bacilli Isolated from Kerosene Contaminated Soil
2018
Adetitun, David | Akinmayowa, Victoria | Atolani, Olubunmi | Olayemi, Albert
Petroleum hydrocarbon contamination is a major global prevalent issue in the petroleum sector. This research focuses on evaluating biodegradation of three Gram-negative bacilli, isolated from cowpea planted soil, contaminated with kerosene. The Gram negative bacilli strains have been characterized and identified, using MicrobactTM ID24E systems for the identification of Enterobacteriaceae and common Miscellaneous Gram-Negative Bacilli (MGNB). The identified organisms include Aeromonas hydrophila, Vibrio parahaemolyticus, and Actinobacillus sp. with the biodegradation indices, monitored for the evaluation of their degrading abilities, being Optical density at 600 nm (OD600nm), pH, and emulsification stability. The chemical profile of single cultures and mixed cultures (consortia) on the jet fuel hydrocarbon has been determined by means of Gas Chromatography Mass Spectrometry (GC-MS), the results of which indicate that all the isolates have undergone above 70% reduction of the hydrocarbon substrates in terms of residual compounds. There has been 48 hydrocarbon compounds in the undegraded jet fuel which, following degradation process, decrease to 5, 13, 7, 10, 6, 9, and 10 compounds for Aeromonas hydrophila, Vibrio parahaemolyticus, Actinobacillus sp., Aeromonas hydrophila and Vibrio parahaemolyticus, Aeromonas hydrophila and Actinobacillus sp., Vibrio parahaemolyticus and Actinobacillus sp., Aeromonas hydrophila, Vibrio parahaemolyticus,and Actinobacillus sp., respectively. The degradation efficiency of the isolates have been relatively high and comparable to the control. Results from this study indicate that all the strains, especially the consortia, are potential candidates for remediating the problem of hydrocarbon contamination in the environment.
Show more [+] Less [-]Semi volatile organic compounds in the snow of Russian Arctic islands: Archipelago Novaya Zemlya
2018
Lebedev, A.T. | Mazur, D.M. | Polyakova, O.V. | Kosyakov, D.S. | Kozhevnikov, A Yu | Latkin, T.B. | Andreeva Yu, I. | Artaev, V.B.
Environmental contamination of the Arctic has widely been used as a worldwide pollution marker. Various classes of organic pollutants such as pesticides, personal care products, PAHs, flame retardants, biomass burning markers, and many others emerging contaminants have been regularly detected in Arctic samples. Although numerous papers have been published reporting data from the Canadian, Danish, and Norwegian Arctic regions, the environmental situation in Russian Arctic remains mostly underreported. Snow analysis is known to be used for monitoring air pollution in the regions with cold climate in both short-term and long-term studies. This paper presents the results of a nontargeted study on the semivolatile organic compounds detected and identified in snow samples collected at the Russian Artic Archipelago Novaya Zemlya in June 2016. Gas chromatography coupled to a high-resolution time-of-flight mass spectrometer enabled the simultaneous detection and quantification of a variety of pollutants including those from the US Environmental Protection Agency (EPA) priority pollutants list, emerging contaminants (plasticizers, flame retardants-only detection), as well as the identification of novel Arctic organic pollutants, (e.g., fatty acid amides and polyoxyalkanes). The possible sources of these novel pollutants are also discussed.GC-HRMS enabled the detection and identification of emerging contaminants and novel organic pollutants in the Arctic, e.g., fatty amides and polyoxyalkanes.
Show more [+] Less [-]Trace organic contaminants in urban runoff: Associations with urban land-use
2018
Burant, Aniela | Selbig, William | Furlong, Edward T. | Higgins, Christopher P.
Urban development has led to an increase in urban runoff, accompanied with a decrease in water quality during rain events. One of the major causes of the decrease in water quality is the presence of trace organic contaminants in urban runoff. However, little is known about the sources of organic contaminants in urban runoff, especially related to land-use and temporal trends in those associated land uses. The objective of this study was to assess the occurrence and concentration trends of organic contaminants for a high-density residential site and commercial strip site in Madison, WI. Flow-weighted samples of urban stormwater runoff, collected with an auto-sampler, were composited and analyzed, producing mean organic contaminants concentrations for each storm event. The contaminants, which include pesticides, flame retardants, polycyclic aromatic hydrocarbons, corrosion inhibitors, among others, were extracted and analyzed by gas chromatography coupled with mass spectrometry or liquid chromatography coupled with tandem mass spectrometry. There were 30 organic contaminants that had greater than 50% detections in at least one of the sites, and those organic contaminants did provide information on similarities and differences of organic contaminants in urban runoff derived from different land uses. The sum of the total measured pesticides showed no significant difference between sites; this was likely due to the considerable green space and associated pesticide use in both sites. However, there were higher total concentrations of organophosphate flame retardants and corrosion inhibitors in the residential site. The reason for this is unknown and will require follow-up studies; however, several hypotheses are presented. Conversely, there were higher total concentrations of polycyclic aromatic hydrocarbons in the commercial site; this is most likely due to higher vehicle traffic in the commercial site. These data show that land-use may be important in determining the composition and concentrations of trace organic contaminants in urban stormwater runoff.
Show more [+] Less [-]Gene cloning, expression, and reducing property enhancement of nitrous oxide reductase from Alcaligenes denitrificans strain TB
2018
Wang, Yu | Wang, Zeyu | Duo, Yankai | Wang, Xiaoping | Chen, Jianmeng | Chen, Jun
Nitrous oxide (N₂O) is a potent greenhouse gas and tends to accumulate as an intermediate in the process of bacteria denitrification. To achieve complete reduction of nitrogen oxide (NOₓ) in bacteria denitrification, the structural gene nosZ encoding nitrous oxide reductase (N₂OR) was cloned from Alcaligenes denitrificans strain TB (GenBank JQ044686). The recombinant plasmid containing the nosZ gene was built, and the expression of nosZ gene in Escherichia coli was determined. Results show that the nosZ gene consisting of 1917 nucleotides achieves heterologous expression successfully by codon optimization strategy under optimal conditions (pre-induction inoculum OD₆₀₀ of 0.67, final IPTG concentration of 0.5 mM, inducing time of 6 h, and inducing temperature of 28 °C). Determination result of gas chromatography confirms that N₂O degradation efficiency of recombinant E. coli is strengthened by at least 1.92 times compared with that of original strain TB when treated with N₂O as substrate. Moreover, N₂OR activity in recombinant strain is 2.09 times higher than that in wild strain TB, which validates the aforementioned result and implies that the recombinant E. coli BL21 (DE3)-pET28b-nosZ is a potential candidate to control N₂O accumulation and alleviate greenhouse effect. In addition, the N₂OR structure and the possible N₂O binding site in Alcaligenes sp. TB are predicted, which open an avenue for further research on the relationship between N₂OR activity and its structure.
Show more [+] Less [-]An optimized method for the analysis of cyclic and linear siloxanes and their distribution in surface and core sediments from industrialized bays in Korea
2018
Lee, Sang Yoon | Lee, Sunggyu | Choi, Minkyu | Kannan, Kurunthachalam | Moon, Hyo-Bang
Environmental contamination by siloxanes is a matter of concern due to their widespread consumption in personal care as well as industrial products and potential toxicity. Nevertheless, methods for simultaneous determination of cyclic and linear siloxanes in sediment are lacking. In this study, we developed an optimized analytical method to determine cyclic and linear siloxanes based on gas chromatography coupled to tandem mass spectrometry (GC-MS/MS). This method was applied to determine concentrations of 19 siloxane compounds in surface and core sediments from industrialized bays in Korea to assess contamination status, spatial distribution, and historical trends. Total concentrations of siloxanes ranged from 15.0 to 11730 (mean: 712) ng/g dry weight, which were similar to or higher than those reported in other countries. The highest concentrations of siloxanes were found in rivers/streams that discharge into coastal waters and bays close to industrial complexes, indicating that industrial activities are major sources of siloxane contamination. Cyclic siloxanes such as D5 and D6 were predominant in surface and core sediments. A significant correlation existed between the concentrations of cyclic and linear siloxanes, suggesting similar sources in the marine coastal environment. The historical record of cyclic siloxanes in core sediments revealed a clear increasing trend since the 1970s. This finding is consistent with the history of local industrialization and global production of siloxanes. This is the first study of historical trends in siloxanes in the coastal environment.
Show more [+] Less [-]Exposure levels and health risk assessment of ambient BTX at urban and rural environments of a terai region of northern India
2018
Masih, Amit | Lall, Anurag S. | Taneja, Ajay | Singhvi, Raj
Benzene, toluene and xylene (BTX) belong to an important group of aromatic volatile organic compounds (VOCs) that are usually emitted from various sources. BTX play a vital role in the tropospheric chemistry as well as pose health hazard to human beings. Thus, an investigation of ambient benzene, toluene and xylene (BTX) was conducted at urban and rural sites of Gorakhpur for a span of one year in order to ascertain the contamination levels. The sampling of BTX was performed by using a low-flow SKC Model 220 sampling pump equipped with activated coconut shell charcoal tubes with a flow rate of 250 ml/min for 20–24 h. The analysis was in accordance with NIOSH method 1501. The efficiency of pump was checked weekly using regulated rotameters with an accuracy of ±1%. The samples were extracted with CS₂ with occasional agitation and analyzed by GC-FID. The total BTX concentration ranged from 3.4 μg m⁻³ to 45.4 μg m⁻³ with mean value 30.95 μg m⁻³ and median 24.8 μg m⁻³. The mean concentration of total BTX was maximum during winter (39.3 μg m⁻³), followed by summer (28.4 μg m⁻³) and monsoon season (25.1 μg m⁻³). The mean concentration of BTX at urban site (11.8 μg m⁻³) was higher than that at rural site (8.8 μg m⁻³). At both the sites, T/B and X/B ratios were highest in monsoon and lowest in winters. Toluene against benzene plot shows R² value of 0.96 and 0.49 at urban and rural sites respectively. Higher R² value at urban site clearly indicates similar sources of emission for benzene and toluene. At both the sites, the estimated integrated lifetime cancer risk (ILTCR) for benzene exceeded the threshold value of 1E-06 whereas the individual hazard quotients (HQ) for BTX did not exceed unity at any of the sites.
Show more [+] Less [-]Linking the contents of hydrophobic PAHs with the canopy water storage capacity of coniferous trees
2018
Anna, Klamerus-Iwan | Emanuel, Gloor | Anna, Sadowska-Rociek | Błońska, Ewa | Lasota, Jarosław | Łagan, Sylwia
The canopy water storage capacity (S) is an important parameter for the hydrological cycle in forests. One factor which influences the S is leaf texture, which in turn is thought to be affected by the contents of polycyclic aromatic hydrocarbons (PAHs). In order to improve our understanding of S we simulated rainfall and measured the S of coniferous species growing under various conditions. The contents of 18 PAHs were measured in the needles. The species chosen were: Scots pine (Pinus sylvestris L), Norway spruce (Picea abies (L.) H. Karst) and silver fir (Abies Alba Mill.). Sample branches were collected in 3 locations: A - forest; B - housing estate; C - city center. We found that PAHs have a significant impact on the S of tree crowns. The increase in the total content of all of polycyclic aromatic hydrocarbons (SUM.PAH) translates into an increase of S for all species. The S is the highest for the P. abies species, followed by P. sylvestris and A. alba at all locations. Within the same species, an increase in the value of S is associated with an increase in the PAH content in needles measured by gas chromatography. For A.alba, the average S increased from 11.54% of the total amount of simulated rain (ml g⁻¹) at location A, to 17.10% at location B, and 21.02% at location C. Similarly for P. abies the S was 21.78%, 29.06% and 34.36% at locations A, B and C respectively.The study extends the knowledge of the mechanisms of plant surface adhesion and the anthropogenic factors that may modify this process as well as foliage properties.
Show more [+] Less [-]Bioaccumulation and human health risks of OCPs and PCBs in freshwater products of Northeast China
2018
Fu, Lei | Lu, Xianbo | Tan, Jun | Zhang, Haijun | Zhang, Yichi | Wang, Shuqiu | Chen, Jiping
The levels and spatial distribution of organochlorine pesticides (OCPs) and polychlorinated biphenyls (PCBs) in freshwater products from Northeast China were investigated by gas chromatography coupled to isotope dilution high-resolution mass spectrometry. All samples were on-spot sampled from main production regions of freshwater products in Northeast China, and these samples were used to systematically assess the potential health risks of OCPs and PCBs associated with consumption of these fishery products. Dichlorodiphenyltrichloroethanes (DDTs), hexachlorocyclohexane (HCHs), hexachlorobenzene (HCB) and PCBs were the major pollutants with 100% detection rates, and their levels ranged from 0.086 to 58, 0.038–3.3, 0.093–4.5 and 0.032–1.4 ng g⁻¹ wet weight, respectively. The estimated dietary intakes of these contaminants were all below their corresponding acceptable daily intakes. Significant regional differences in the levels of OCPs and PCBs (P ≦ 0.001) were found in samples from Liaoning and Inner Mongolia. The results showed that the concentrations of targeted contaminants in aquatic products had species-specific characteristics, and the levels of targeted pollutants in Oncorhynchus mykiss and Eriocheir sienesis were significantly higher than those in other aquatic product species. Advisories on ten species of aquatic products suggested that consumption of Eriocheir sinensis, Oncorhynchus mykiss and Cyprinus carpio at a rate exceeding 15 meals per month would pose a cancer risk. A health risk assessment indicated that exposure to these pollutants through freshwater products consumption would cause a non-ignorable potential carcinogenic risk to humans.
Show more [+] Less [-]Occurrence and human exposure to brominated and organophosphorus flame retardants via indoor dust in a Brazilian city
2018
Cristale, Joyce | Aragão Belé, Tiago Gomes | Lacorte, Silvia | Rodrigues de Marchi, Mary Rosa
Indoor dust is considered an important human exposure route to flame retardants (FRs), which has arised concern due the toxic properties of some of these substances. In this study, ten organophosphorus flame retardants (OPFRs), eight polybrominated diphenyl ethers (PBDEs) and four new brominated flame retardants (NBFRs) were determined in indoor dust from different places in Araraquara-SP (Brazil). The sampled places included houses, apartments, offices, primary schools and cars. The analysis of the sample extracts was performed by gas chromatography coupled to mass spectrometry and two ionization techniques were used (electron ionization – EI; electron capture negative ionization – ECNI). OPFRs were the most abundant compounds and tris(2-butoxyethyl) phosphate (TBOEP), tris(phenyl) phosphate (TPHP), tris(1,3-dichloroisopropyl) phosphate (TDCIPP) and tris(2-chloroisopropyl) phosphate (TCIPP) were present at the highest concentrations. Among the brominated FRs, the most ubiquitous compounds were BDE-209, bis(2-ethylhexyl) tetrabromophthalate (BEH-TEBP) and decabromodiphenyl ethane (DBDPE). Statistical analysis revealed that there were differences among dust typologies for TBOEP, TDCIPP, ethylhexyl diphenyl phosphate (EHDPHP), BDE-209, 2-ethylhexyl 2,3,4,5-tetrabromobenzoate (EH-TBB), BEH-TEBP and DBDPE, which were attributed to different construction materials in each particular environment and to the age of the buildings. The highest levels of brominated FRs were observed in offices, TBOEP was at high concentration in primary schools, and TDCIPP was at high concentration in cars. A preliminary risk assessment revealed that toddlers were exposed to TBOEP levels higher than the reference dose when considering the worst case scenario. The results obtained in this study showed for the first time that although Brazil does not regulate the use of FRs, these substances are present in indoor dust at levels similar to the observed in countries that have strict fire safety standards, and that humans are exposed to complex mixtures of these contaminants via indoor dust.
Show more [+] Less [-]Metagenome enrichment approach used for selection of oil-degrading bacteria consortia for drill cutting residue bioremediation
2018
Guerra, Alaine B. | Oliveira, Jorge S. | Silva-Portela, Rita C.B. | Araújo, Wydemberg | Carlos, Aline C. | Vasconcelos, Ana Tereza R. | Freitas, Ana Teresa | Domingos, Yldeney Silva | de Farias, Mirna Ferreira | Fernandes, Glauber José Turolla | Agnez-Lima, Lucymara F.
Drill cuttings leave behind thousands of tons of residues without adequate treatment, generating a large environmental liability. Therefore knowledge about the microbial community of drilling residue may be useful for developing bioremediation strategies. In this work, samples of drilling residue were enriched in different culture media in the presence of petroleum, aiming to select potentially oil-degrading bacteria and biosurfactant producers. Total DNA was extracted directly from the drill cutting samples and from two enriched consortia and sequenced using the Ion Torrent platform. Taxonomic analysis revealed the predominance of Proteobacteria in the metagenome from the drill cuttings, while Firmicutes was enriched in consortia samples. Functional analysis using the Biosurfactants and Biodegradation Database (BioSurfDB) revealed a similar pattern among the three samples regarding hydrocarbon degradation and biosurfactants production pathways. However, some statistical differences were observed between samples. Namely, the pathways related to the degradation of fatty acids, chloroalkanes, and chloroalkanes were enriched in consortia samples. The degradation colorimetric assay using dichlorophenolindophenol as an indicator was positive for several hydrocarbon substrates. The consortia were also able to produce biosurfactants, with biosynthesis of iturin, lichnysin, and surfactin among the more abundant pathways. A microcosms assay followed by gas chromatography analysis showed the efficacy of the consortia in degrading alkanes, as we observed a reduction of around 66% and 30% for each consortium in total alkanes. These data suggest the potential use of these consortia in the bioremediation of drilling residue based on autochthonous bioaugmentation.
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