The overall objective of this research was to develop a reliable, robust, and maintenance-free passive system for biological denitrification in on-site wastewater treatment systems. The process relies on sulfur oxidizing denitrifying bacteria in upflow packed bioreactors. Since this process consumes alkalinity, it is necessary to add a solid-phase buffer that can scavenge the H⁺ as it is generated by the biologically-mediated reaction and arrest the drop in the pH value. This study investigated the use of limestone, marble chips and crushed oyster shell as solid-phase buffers that provide alkalinity. Two bench-scale upflow column reactors and two field-scale bioreactors were constructed and packed with sulfur pellets and an alkalinity source. The pilot scale bioreactors (~200 L each) were installed at the Massachusetts Alternative Septic System Test Center (MASSTC) in Sandwich, MA. The pilot-scale bioreactors performed better when oyster shell was used as the solid-phase buffer vis-à-vis marble chips. In both (pilot-scale and laboratory-scale) systems, denitrification rates were high with the effluent NO₃ - --N concentration consistently below 8 mg/L.

A benthic in situ flume and a 1D biogeochemical sediment model to evaluate solute fluxes across the sediment-water interface have been developed. The flume was successfully used to determine oxygen and nutrient fluxes at various locations of the Neckar River in Germany. The experimental results were linked with vertical pore water concentration profiles and independently verified with the model. By combining experimental and model results we assessed the influence of dissolved oxygen concentrations in the water column and the availability of degradable organic matter on sediment oxygen demand. The results and the derived relations can be used to parameterize the sediment module of large scale water quality models, allowing one to assess the influence of sediment-water interactions on various aspects of river water quality. Moreover, the biogeochemical sediment model can help to improve the general understanding of the processes governing solute concentrations and fluxes in sediments and across their interfaces.