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Incorporation and mineralization of TNT and other anthropogenic organics by natural microbial assemblages from a small, tropical estuary Full text
2013
2,4,6-Trinitrotoluene (TNT) metabolism was compared across salinity transects in Kahana Bay, a small tropical estuary on Oahu, HI. In surface water, TNT incorporation rates (range: 3–121 μg C L−1 d−1) were often 1–2 orders of magnitude higher than mineralization rates suggesting that it may serve as organic nitrogen for coastal microbial assemblages. These rates were often an order of magnitude more rapid than those for RDX and two orders more than HMX. During average or high stream flow, TNT incorporation was most rapid at the riverine end member and generally decreased with increasing salinity. This pattern was not seen during low flow periods. Although TNT metabolism was not correlated with heterotrophic growth rate, it may be related to metabolism of other aromatic compounds. With most TNT ring-carbon incorporation efficiencies at greater than 97%, production of new biomass appears to be a more significant product of microbial TNT metabolism than mineralization.
Show more [+] Less [-]Biogeochemistry and community ecology in a spring-fed urban river following a major earthquake Full text
2013
Wells, Naomi S. | Clough, Tim J. | Condron, Leo M. | Baisden, W Troy | Harding, Jon S. | Dong, Y. | Lewis, G.D. | Lear, Gavin
In February 2011 a MW 6.3 earthquake in Christchurch, New Zealand inundated urban waterways with sediment from liquefaction and triggered sewage spills. The impacts of, and recovery from, this natural disaster on the stream biogeochemistry and biology were assessed over six months along a longitudinal impact gradient in an urban river. The impact of liquefaction was masked by earthquake triggered sewage spills (∼20,000 m3 day−1 entering the river for one month). Within 10 days of the earthquake dissolved oxygen in the lowest reaches was <1 mg l−1, in-stream denitrification accelerated (attenuating 40–80% of sewage nitrogen), microbial biofilm communities changed, and several benthic invertebrate taxa disappeared. Following sewage system repairs, the river recovered in a reverse cascade, and within six months there were no differences in water chemistry, nutrient cycling, or benthic communities between severely and minimally impacted reaches. This study highlights the importance of assessing environmental impact following urban natural disasters.
Show more [+] Less [-]Biomass burning in eastern Europe during spring 2006 caused high deposition of ammonium in northern Fennoscandia Full text
2013
Karlsson, Per Erik | Ferm, Martin | Tømmervik, Hans | Hole, Lars R. | Pihl Karlsson, Gunilla | Ruoho-Airola, Tuija | Aas, Wenche | Hellsten, Sofie | Akselsson, Cecilia | Mikkelsen, Teis Nørgaard | Nihlgård, Bengt
High air concentrations of ammonium were detected at low and high altitude sites in Sweden, Finland and Norway during the spring 2006, coinciding with polluted air from biomass burning in eastern Europe passing over central and northern Fennoscandia. Unusually high values for throughfall deposition of ammonium were detected at one low altitude site and several high altitude sites in north Sweden. The occurrence of the high ammonium in throughfall differed between the summer months 2006, most likely related to the timing of precipitation events. The ammonia dry deposition may have contributed to unusual visible injuries on the tree vegetation in northern Fennoscandia that occurred during 2006, in combination with high ozone concentrations. It is concluded that long-range transport of ammonium from large-scale biomass burning may contribute substantially to the nitrogen load at northern latitudes.
Show more [+] Less [-]Effects of plant species identity, diversity and soil fertility on biodegradation of phenanthrene in soil Full text
2013
Oyelami, Ayodeji O. | Okere, Uchechukwu V. | Orwin, Kate H. | De Deyn, Gerlinde B. | Jones, K. C. (Kevin C.) | Semple, K. T. (Kirk T.)
The work presented in this paper investigated the effects of plant species composition, species diversity and soil fertility on biodegradation of 14C-phenanthrene in soil. The two soils used were of contrasting fertility, taken from long term unfertilised and fertilised grassland, showing differences in total nitrogen content (%N). Plant communities consisted of six different plant species: two grasses, two forbs, and two legume species, and ranged in species richness from 1 to 6. The degradation of 14C-phenanthrene was evaluated by measuring indigenous catabolic activity following the addition of the contaminant to soil using respirometry. Soil fertility was a driving factor in all aspects of 14C-phenanthrene degradation; lag phase, maximum rates and total extents of 14C-phenanthrene mineralisation were higher in improved soils compared to unimproved soils. Plant identity had a significant effect on the lag phase and extents of mineralisation. Soil fertility was the major influence also on abundance of microbial communities.
Show more [+] Less [-]A multi-isotope approach for estimating industrial contributions to atmospheric nitrogen deposition in the Athabasca oil sands region in Alberta, Canada Full text
2013
Proemse, Bernadette C. | Mayer, Bernhard | Fenn, Mark E. | Ross, Christopher S.
Industrial nitrogen (N) emissions in the Athabasca oil sands region (AOSR), Alberta, Canada, affect nitrate (NO3) and ammonium (NH4) deposition rates in close vicinity of industrial emitters. NO3–N and NH4–N open field and throughfall deposition rates were determined at various sites between 3 km and 113 km distance to the main oil sand operations between May 2008 and May 2009. NO3 and NH4 were analyzed for δ15N–NO3, δ18O–NO3, Δ17O–NO3 and δ15N–NH4. Marked differences in the δ18O and Δ17O values between industrial emissions and background deposition allowed for the estimation of minimum industrial contributions to atmospheric NO3 deposition. δ15N–NH4 values also allowed for estimates of industrial contributions to atmospheric NH4 deposition. Results revealed that particularly sites within ∼30 km radius from the main oil sands developments are significantly affected by industrial contributions to atmospheric NO3 and NH4 deposition.
Show more [+] Less [-]Does plant uptake or low soil mineral-N production limit mineral-N losses to surface waters and groundwater from soils under grass in summer? Full text
2013
Bhatti, Ambreen | McClean, Colin J. | Cresser, Malcolm S.
Summer minima and autumn/winter maxima in nitrate concentrations in rivers are reputedly due to high plant uptake of nitrate from soils in summer. A novel alternative hypothesis is tested here for soils under grass. By summer, residual readily mineralizable plant litter from the previous autumn/winter is negligible and fresh litter input low. Consequently little mineral-N is produced in the soil. Water-soluble and KCl-extractable mineral N in fresh soils and soils incubated outdoors for 7 days have been monitored over 12 months for soil transects at two permanent grassland sites near York, UK, using 6 replicates throughout. Vegetation-free soil is shown to produce very limited mineral-N in summer, despite the warm, moist conditions. Litter accumulates in autumn/winter and initially its high C:N ratio favours N accumulation in the soil. It is also shown that mineral-N generated monthly in situ in soil substantially exceeds the monthly mineral-N inputs via wet deposition at the sites.
Show more [+] Less [-]Enhancing the biodegradation of oil in sandy sediments with choline: A naturally methylated nitrogen compound Full text
2013
Mortazavi, Behzad | Horel, Agota | Anders, Jennifer S. | Mirjafari, Arsalan | Beazley, Melanie J. | Sobecky, Patricia A.
We investigated how additions of choline, a naturally occurring methylated nitrogen-containing compound, accelerated hydrocarbon degradation in sandy sediments contaminated with moderately weathered crude oil (4000 mg kg−1 sediment). Addition of lauroylcholine chloride (LCC) and tricholine citrate (TCC) to oil contaminated sediments resulted in 1.6 times higher hydrocarbon degradation rates compared to treatments without added choline derivatives. However, the degradation rate constant for the oil contaminated sediments amended with LCC was similar to that in contaminated sediments amended with inorganic nitrogen, phosphorus, and glucose. Additions of LLC and TCC to sediments containing extensively weathered oil also resulted in enhanced mineralization rates. Cultivation-free 16S rRNA analysis revealed the presence of an extant microbial community with clones closely related to known hydrocarbon degraders from the Gammaproteobacteria, Alphaproteobacteria, and Firmicutes phyla. The results demonstrate that the addition of minimal amounts of organic compounds to oil contaminated sediments enhances the degradation of hydrocarbons.
Show more [+] Less [-]Can citizen science produce good science? Testing the OPAL Air Survey methodology, using lichens as indicators of nitrogenous pollution Full text
2013
Tregidgo, Daniel J. | West, Sarah E. | Ashmore, M. R. (Mike R.)
Citizen science is having increasing influence on environmental monitoring as its advantages are becoming recognised. However methodologies are often simplified to make them accessible to citizen scientists. We tested whether a recent citizen science survey (the OPAL Air Survey) could detect trends in lichen community composition over transects away from roads. We hypothesised that the abundance of nitrophilic lichens would decrease with distance from the road, while that of nitrophobic lichens would increase. The hypothesised changes were detected along strong pollution gradients, but not where the road source was relatively weak, or background pollution relatively high. We conclude that the simplified OPAL methodology can detect large contrasts in nitrogenous pollution, but it may not be able to detect more subtle changes in pollution exposure. Similar studies are needed in conjunction with the ever-growing body of citizen science work to ensure that the limitations of these methods are fully understood.
Show more [+] Less [-]Nitrogen deposition alters nitrogen cycling and reduces soil carbon content in low-productivity semiarid Mediterranean ecosystems Full text
2013
Ochoa-Hueso, Raúl | Maestre, Fernando T. | de los Ríos, Asunción | Valea, Sergio | Theobald, Mark R. | Vivanco, Marta G. | Manrique, Esteban | Bowker, Mathew A.
Anthropogenic N deposition poses a threat to European Mediterranean ecosystems. We combined data from an extant N deposition gradient (4.3–7.3 kg N ha−1 yr−1) from semiarid areas of Spain and a field experiment in central Spain to evaluate N deposition effects on soil fertility, function and cyanobacteria community. Soil organic N did not increase along the extant gradient. Nitrogen fixation decreased along existing and experimental N deposition gradients, a result possibly related to compositional shifts in soil cyanobacteria community. Net ammonification and nitrification (which dominated N-mineralization) were reduced and increased, respectively, by N fertilization, suggesting alterations in the N cycle. Soil organic C content, C:N ratios and the activity of β-glucosidase decreased along the extant gradient in most locations. Our results suggest that semiarid soils in low-productivity sites are unable to store additional N inputs, and that are also unable to mitigate increasing C emissions when experiencing increased N deposition.
Show more [+] Less [-]Evaluating nutrient impacts in urban watersheds: Challenges and research opportunities Full text
2013
Carey, Richard O. | Hochmuth, George J. | Martinez, Christopher J. | Boyer, Treavor H. | Dukes, Michael D. | Toor, Gurpal S. | Cisar, J. L. (John L.)
This literature review focuses on the prevalence of nitrogen and phosphorus in urban environments and the complex relationships between land use and water quality. Extensive research in urban watersheds has broadened our knowledge about point and non-point pollutant sources, but the fate of nutrients is not completely understood. For example, it is not known how long-term nutrient cycling processes in turfgrass landscapes influence nitrogen retention rates or the relative atmospheric contribution to urban nitrogen exports. The effect of prolonged reclaimed water irrigation is also unknown. Stable isotopes have been used to trace pollutants, but distinguishing sources (e.g., fertilizers, wastewater, etc.) can be difficult. Identifying pollutant sources may aid our understanding of harmful algal blooms because the extent of the relationship between urban nutrient sources and algal blooms is unclear. Further research on the delivery and fate of nutrients within urban watersheds is needed to address manageable water quality impacts.
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