We investigated the environmental impact of a deep water fish farm (190 m). Despite deep water and low water currents, sediments underneath the farm were heavily enriched with organic matter, resulting in stimulated biogeochemical cycling. During the first 7 months of the production cycle benthic fluxes were stimulated >29 times for CO₂ and O₂ and >2000 times for NH₄ ⁺, when compared to the reference site. During the final 11 months, however, benthic fluxes decreased despite increasing sedimentation. Investigations of microbial mineralization revealed that the sediment metabolic capacity was exceeded, which resulted in inhibited microbial mineralization due to negative feed-backs from accumulation of various solutes in pore water. Conclusions are that (1) deep water sediments at 8 °C can metabolize fish farm waste corresponding to 407 and 29 mmol m⁻² d⁻¹ POC and TN, respectively, and (2) siting fish farms at deep water sites is not a universal solution for reducing benthic impacts.

Effects of N deficiency and salinity on root anatomy, permeability and metal (Pb, Zn and Cu) translocation and tolerance were investigated using mangrove seedlings of Rhizophora stylosa. The results showed that salt could directly reduce radial oxygen loss (ROL) by stimulation of lignification within exodermis. N deficiency, oppositely, would reduce lignification. Such an alteration in root permeability may also influence metal tolerance by plants. The data indicated that a moderate salinity could stimulate a lignified exodermis that delayed the entry of metals into the roots and thereby contributed to a higher metal tolerance, while N deficiency would aggravate metal toxicity. The results from sand pot trail further confirmed this issue. This study provides a barrier property of the exodermis in dealing with environments. The plasticity of root anatomy is likely an adaptive strategy to regulate the fluxes of gases, nutrients and toxins at root–soil interface.

Understanding the complex biotic and abiotic interactions invoked by the rice root system in oxygen-depleted soil is an important step in screening genotypes for low toxic metal or metalloid accumulation. A hydroponic and a rhizobox experiment have been conducted to explore the effects of varying root oxygen release on chemical changes, As fractionation in rhizosphere soil and Fe plaque formation, As uptake and tolerance by different rice genotypes. The results showed that rice genotypes with higher rates of radial oxygen loss (ROL) and at the bolting stage, tended to have greater effects on rhizosphere Eh, pH, Fe³⁺/Fe²⁺ quotients, As fractionation and mobility and also on Fe plaque formation compared to those with lower ROL and at the tillering stage. Genotypes with higher ROL have a strong ability to reduce As accumulation in shoots and increase As tolerance by reducing As mobilization in the rhizosphere and by limiting As translocation.

The CH₄ oxidation dynamics was investigated by observing the CH₄ oxidation rates at concentrations (from 1.0 × 10⁴ ppmv to 2.0 × 10⁵ ppmv) mixed with O₂ (from 5.0 × 10⁴ ppmv to 7.5 × 10⁵ ppmv). The CH₄–O₂ dual-substrate model based on Michaelis–Menten equation ( [Formula: see text] = 1.4 × 10⁵ ppmv; Vₘₐₓ = 7.6 × 10² μmol kg⁻¹ d⁻¹; [Formula: see text] = 5.5 × 10⁴ ppmv) was got and agreed well with the experimental data when the initial O₂/CH₄ ratio reached 3:1, indicating full aerobic CH₄ oxidization. Anoxic CH₄ oxidation gradually became predominant with decreasing O₂/CH₄ ratios. The effect of CH₄ is more significant than O₂, as evidenced by higher slope (0.58 kg⁻¹ d⁻¹) of [Formula: see text] line graph compared with that of [Formula: see text] line graph (0.062 kg⁻¹ d⁻¹). The paper presents the dynamics of CH₄ oxidation and proposes that ratio of O₂/CH₄ need to be considered for their dynamically changing in environmental habitats. The findings provide an important parameter for optimizing the operations of breathing biocover systems.

The largest municipal outfall on the west coast of Canada discharges into the southeastern Strait of Georgia, where high sedimentation from the Fraser River has maintained stable sediment geochemical and contaminant conditions from 2001 to 2011. Outfall exposure has not affected trophic structure or diversity (H′), but has significantly affected faunal composition and species richness, resulting in loss of crustaceans and echinoderms near-field. Organic biomass and production have mostly remained within expected background ranges for the Strait, due to recent increases in a low oxygen tolerant polychaete in the high deposition zone. A significant regional shift in faunal composition occurred after 2003, followed by gradual declines in richness, abundance, calcareous organisms and production. This cannot be attributed to changes in outfall exposure, but is exaggerated by it. We hypothesize that changing river flow, extreme events and shifts in offshore upwelling water temperature, oxygen and pH may be increasing geochemical stress in benthos.

This study provides data concerning the hydrography and water chemistry of the Atlantic region between 29–38° N and 27–31° W, and establishes background values for dissolved Cu, Cd, Pb and As. Three water masses were identified: the Eastern North Atlantic Central Water (ENACW), the Mediterranean Water (MW) and the North Atlantic Deep Water (NADW). The ENACW exhibits a clear meridional gradient of temperature and salinity, with comparatively high values at the southern sites and lower values on the Azores platform. The ENACW, which includes the euphotic zone, also had comparatively high concentrations of oxygen and lower concentrations of nutrients and metals. The Cu, Cd and Pb results suggest that new background concentrations for OSPAR Region V (the Wider Atlantic) should be established as follows: 0.15–13nM for Cu, 0.05–1.4nM for Cd and 0.03–5nM for Pb. The background concentrations of As for OSPAR Region V should be 7–28nM.

We investigated the sediment–seawater solute flux at five sites in the polluted Avon–Heathcote Estuary, New Zealand, to provide a point of comparison for future studies of the effects of the closure of a major wastewater outfall into the estuary. Sediments collected in winters 2007 and 2008, and summer 2008, ranked consistently in organic matter content. Microelectrode profiling and sediment-core incubations revealed (1) a dominant role of microphytes in regulating solute flux causing significant differences in the dark and light sediment O₂ consumption (Rd, Rₗ), total sediment O₂ utilisation (TOUd, TOUₗ), and inorganic nutrient flux, (2) consistent ranking of sites in solute flux, and (3) a clear solute-flux signature of the wastewater effluent. Sediment near the wastewater outfall exhibited the highest absolute R and TOU, the lowest ratio Rₗ/Rd, the highest dark efflux of dissolved reactive phosphorus and ammonium, and the highest dark and light uptake of nitrate+nitrite.

Typically, rising atmospheric carbon dioxide concentrations are used to illustrate how humans have impacted the earth. However, we have also dramatically altered the amount of nitrogen (N) and phosphorus (P) cycling through the biosphere. Eventually these nutrients are carried to coastal receiving waters where they cause severe, often negative consequences including increased phytoplankton and macroalgae blooms, loss of submerged aquatic vegetation, low oxygen events, and decreased biodiversity. In many systems mitigation efforts are now underway to return these ecosystems to a less impacted state. While many uncertainties about the best way to manage eutrophic systems remain it is clear that we must take action to lessen our human nutrient footprint. Based on our current understanding of eutrophic systems we present ten eutrophication commandments or guidelines as a tool for scientists, policy makers, managers, and the public.

Photolysis rates of phenanthrene as a function of ionic strength (salinity), oxygen levels and humic acid concentrations were measured in aqueous solution over the range of conditions found in fresh to marine waters. Photolysis followed first order kinetics, with an estimated photodegradation half-life in sunlight in pure water of 10.3±0.7h, in the mid-range of published results. Photolysis rate constants decreased by a factor of 5 in solutions with humic acid concentrations from 0 to 10mgCL⁻¹. This decrease could be modeled entirely based on competitive light absorption effects due to the added humics. No significant ionic strength or oxygen effects were observed, consistent with a direct photolysis mechanism. In the absence of significant solution medium effects, the photodegradation lifetime of phenanthrene will depend only on solar fluxes (i.e. temporal and seasonal changes in sunlight) and not vary with a freshwater to marine environment.

In this study, we investigated the influence of low level contamination by copper, lead and zinc on the functioning of estuarine sandflat ecosystems by comparing the strength and variability of relationships between benthic macrofauna and fluxes (oxygen and nutrients) at three clean and three mildly contaminated sites. Specifically, as indicators of ecosystem functioning, we examined relationships between bivalve biomass, total benthic respiration and ammonium release, and ammonium uptake and benthic primary production. Furthermore, a small amount of organic matter was added to experimental plots at all sites (35g/0.2m²) to evaluate stress-on-stress responses relative to controls. Relationships were strongest at the clean sites (steepest slopes, highest r² values, lowest p-values) and weakest at the mildly contaminated sites and in organically enriched plots. Our results suggest that changes in ecosystem functioning may be occurring at mild (<ERL) levels of pollution that are unlikely to cause widespread mortality of macrofauna.