The Karnaphuli River is one of the prime and most important streams in the southeastern part of Bangladesh. The favorable water current and the geographic location have rendered the Karnaphuly River estuary a suitable habitat and a breeding ground for diverse fish species. Reversely, this estuary has been polluted by discharges from many point and non-point sources due to its location in the catchment area of a heavily industrialized area, Chattagram port city. However, published research concerning the status of toxic and trace elements in some commercially important benthic and pelagic coastal fish species in Karnaphuli River estuary was not found in the existing literature. Therefore, it's an important field of study on the assessment of toxic and trace elements concentration in the commercially important benthic and pelagic coastal fish species and their health taxation in the Karnaphuli River Estuary. Energy dispersive X-ray fluorescence (ED-XRF) was used to quantify trace metal concentration in edible parts of the fish species. This study revealed that the rank of the trace metals concentration was as follows (mg/kg): Zn (37.1) > Mn (16.12) > V (11.16) > Cu (9.49) > Rb (5.62) > Pb (2.98) > Cr (1.59) > Co (1.17). The F-test showed that a significant difference at 95 % confidence level in the distribution pattern of trace metals concentration among the examined fish species in the study area. The metal pollution index (MPI) in the muscle of fishes were found to be in the following order: L. bata > P. monodon > T. cirratus > M. bleekeri > O. pabda > H. nehereus > L. calcarifer > P. argenteus > P. paradiseus > T. toli, and the MPIs for most of the benthic fish species were higher compared to the pelagic fishes. On the other hand, the examined fish species were significantly bio-accumulative with the highest bio-accumulation factor value for benthic species. The multivariate analysis identified that the sources of the trace metals were associated with anthropogenic activities. For the human health risk assessment concern, estimated daily intake, target hazard quotient and cancer-causing risk were estimated. The results for non-cancer hazardous index values were found to be lower than unity. On the other hand, the total cancer risk data ranging from 1.24E−05 to 1.70E−05 were fallen within the range for the threshold values (1.0E−06 to 1.0E−04). However, considering the suggested values set by the environmental and regulatory agencies, it has been recommended that no significant non-carcinogenic and cancer-causing health risk for humans was seen due to the consumption of the studied fish species.

The concentration of 23 metals was analyzed in the tissue of nine fish species, which represents the different habitats, i.e., primary feeder, tertiary feeder, and bottom feeder in fresh and marine waters of Visakhapatnam. Scomberomorus guttatus, Upeneus vittatus, and Penaeus indicus were selected in the coastal waters; Xiphias gladius, Stolephorus indicus, and Penaeus monodon from deep sea; and Channa striata, Puntius chola, and Macrobrachium rosenbergii from freshwater were analyzed. Metals in fish were analyzed by using the Inductive Couple Plasma Mass Spectrometer (ICP-MS). The concentrations of metals in fish were within the permissible limit set by WHO, FAO apart from Chromium, Aluminum, Manganese, and Arsenic. The concentrations were highest in coastal water fish and lowest in freshwater fish. Similarly, higher concentrations were observed in bottom feeders than in other tiers.

Penaeus monodon, the Asian black tiger shrimp is one of the most widely consumed marine crustaceans worldwide. In this study, we examine and compare the fecal microbiota of P. monodon from highly polluted waters around Jakarta Bay, with those of less polluted waters of Bali. Using next generation sequencing techniques, we identified potential bacterial pathogens and common viral diseases of shrimp. Proteobacteria (96.08%) was found to be the most predominant phylum, followed by Bacteriodetes (2.32%), Fusobacteria (0.96%), and Firmicutes (0.53%). On the order level, Vibrionales (66.20%) and Pseudoaltermonadales (24.81%) were detected as predominant taxa. qPCR profiling was used as a confirmatory step and further revealed Vibrio alginolyticus and Photobacterium damselae as two potential pathogenic species present in most of the samples. In addition, viral diseases for shrimp were discovered among the samples, WSSV in Jakarta free-living samples, YHV in Bali free-living samples and IHHNV in both.

The genetic diversity of giant tiger prawns in relation to trace metals (TMs) pollution was analysed using 159 individuals from eight sites at the Tanzanian coast. The seven microsatellites analysed showed high degree of polymorphism (4–44 alleles). The measured genetic diversity (Ho=0.592±0.047) was comparable to that of populations in the Western Indian Ocean. Apart from that, correlation analysis revealed significant negative associations between genetic diversity and TMs pollution (p<0.05), supporting the genetic erosion hypothesis. Limited gene flow was indicated by a significant genetic differentiation (FST=0.059, p<0.05). The Mantel test rejected the isolation-by-distance hypothesis, but revealed that gene flow along the Tanzanian coast is limited by TMs pollution. This suggests that TMs affect larvae settlement and it may account for the measured deficiency of heterozygosity. This calls for strengthened pollution control measures in order to conserve this commercially important species.

This study was conducted to assess the proximate analysis (protein, carbohydrate, lipid, and moisture content) and concentration levels of metals (Zn, Cu, Cd, Pb, and Cr) in the muscles of selected shellfish (Portunus reticulatus, P. segnis, P. sanguinolentus, Scylla olivaceae, Penaeus monodon, and P. indicus) species. The concentration of metals showed significant difference (p > 0.05) among species. The detected concentrations of the analyzed heavy metals were below the daily intake and legal limits set by national and international standards. The THQs and CR index were calculated to evaluate the risk estimation of the metal contamination associated with the human health. The THQ values of all metals were below 1 in all species, indicated that there is no risk of adverse health effect, but the risk of elevated intakes of heavy metals adversely affecting food safety for the studied species. The CR index indicated that Cd and Pb caused the greatest cancer risk. The correlation and multivariate (principle component analysis) among metal concentration and nutritional quality were also evaluated. The carbohydrate and moisture showed the positive correlation (p > 0.05) with metals. The biochemical results of the present work clearly indicate that there was a significant difference in the muscles of shellfish. It was concluded that more effective controls should be focused on Cd and Pb to reduce pollution for quality and seafood safety concern.

Vibrio parahaemolyticus is a causative agent of human serious seafood-borne gastroenteritis disease and even death. Shrimps, often eaten raw or undercooked, are an important reservoir of the bacterium. In this study, we isolated and characterized a total of 400 V. parahaemolyticus strains from commonly consumed fresh shrimps (Litopenaeus vannamei, Macrobrachium rosenbergii, Penaeus monodon, and Exopalaemon carinicauda) in Shanghai fish markets, China in 2013–2014. The results revealed an extremely low occurrence of pathogenic V. parahaemolyticus carrying two major toxic genes (tdh and trh, 0.0 and 0.5 %). However, high incidences of antibiotic resistance were observed among the strains against ampicillin (99 %), streptomycin (45.25 %), rifampicin (38.25 %), and spectinomycin (25.50 %). Approximately 24 % of the strains derived from the P. monodon sample displayed multidrug resistant (MDR) phenotypes, followed by 19, 12, and 6 % from the E. carinicauda, L. vannamei, and M. rosenbergii samples, respectively. Moreover, tolerance to heavy metals of Cr³⁺ and Zn²⁺ was observed in 90 antibiotic resistant strains, the majority of which also displayed resistance to Cu²⁺ (93.3 %), Pb²⁺ (87.8 %), and Cd²⁺(73.3 %). The pulsed-field gel electrophoresis (PFGE)-based genotyping of these strains revealed a total of 71 distinct pulsotypes, demonstrating a large degree of genomic variation among the isolates. The wide distribution of MDR and heavy-metal resistance isolates in the PFGE clusters suggested the co-existence of a number of resistant determinants in V. parahaemolyticus population in the detected samples. This study provided data in support of aquatic animal health management and food safety risk assessment in aquaculture industry.