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The response profile to chronic radiation exposure based on the transcriptome analysis of Scots pine from Chernobyl affected zone
2019
Duarte, Gustavo | Volkova Yu, Polina | Institut Jean-Pierre Bourgin (IJPB) ; Institut National de la Recherche Agronomique (INRA)-AgroParisTech | Russian Institute of Radiology and Agroecology ; Partenaires INRAE | Russian Science FoundationRussian Science Foundation (RSF) [14-14-00666]; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [18-34-20012]
International audience | Radioactive contamination of the natural areas is one of the most long-lasting anthropogenic impacts on the environment. Scots pine (Pinus sylvestris L.) is a promising organism for radiation-related research because of its high radiosensitivity, but the genome size of Pinacea species has imposed obstacles for high-throughput studies so far. In this work, we conducted the analysis of the de novo assembled transcriptome of Scots pine populations growing in the Chernobyl-affected zone, which is still today contaminated with radionuclides because of the accident at the nuclear power plant in 1986. The transcriptome profiles indicate a clear pattern of adaptive stress response, which seems to be dose-dependent. The transcriptional response indicates a continuous modulation of the cellular redox system, enhanced expression of chaperones and histones, along with the control of ions balance. Interestingly, the activity of transposable element families is inversely correlated to the exposure levels to radiation. These adaptive responses, which are triggered by radiation doses 30 times lower than the one accepted as a safe for biota species by international regulations, suggest that the environmental management in radiation protection should be reviewed.
Show more [+] Less [-]The response profile to chronic radiation exposure based on the transcriptome analysis of Scots pine from Chernobyl affected zone
2019
Duarte, Gustavo T. | Volkova, Polina Yu | Geras'kin, Stanislav A.
Radioactive contamination of the natural areas is one of the most long-lasting anthropogenic impacts on the environment. Scots pine (Pinus sylvestris L.) is a promising organism for radiation-related research because of its high radiosensitivity, but the genome size of Pinacea species has imposed obstacles for high-throughput studies so far. In this work, we conducted the analysis of the de novo assembled transcriptome of Scots pine populations growing in the Chernobyl-affected zone, which is still today contaminated with radionuclides because of the accident at the nuclear power plant in 1986. The transcriptome profiles indicate a clear pattern of adaptive stress response, which seems to be dose-dependent. The transcriptional response indicates a continuous modulation of the cellular redox system, enhanced expression of chaperones and histones, along with the control of ions balance. Interestingly, the activity of transposable element families is inversely correlated to the exposure levels to radiation. These adaptive responses, which are triggered by radiation doses 30 times lower than the one accepted as a safe for biota species by international regulations, suggest that the environmental management in radiation protection should be reviewed.
Show more [+] Less [-]Changes in the Physico-Chemical Parameters of Water as a Result of Long-Term Contact with Biomass, on the Example of Pine Bark (Pinus sylvestris)
2019
Garbowski, Tomasz
Water encountering biomass can affect the change in its chemical composition and properties through the leaching process. In the leaching process, leachates are formed, and their composition depends on the type of biomass and the time of exposure to the solvent (water). The aim of the study was to analyze the influence of time of contact of water with biomass on changing the chemical composition of the leachates formed during long-term (counted in days) leaching of pine bark (Pinus sylvestris). Long-term leaching contributes to a loss of organic and inorganic compounds, and in this study, an intensive extraction of biomass components was noted from the first day of leaching. Along with the extension of the leaching time, values for electrical conductivity, concentration of mineral fraction (ashes), concentration of volatile matter, and concentration of total organic carbon significantly increased in the leachates. However, no linear relationship between the extension of the leaching time and the increase in the concentration of chlorides, sulfates, nitrogen, phosphorus, and other elements in the leachates was observed. This study will allow to better understand the impact of vegetation communities on the aquatic and terrestrial ecosystems, as well as help to provide adequate conditions of storage of biomass for technological purposes. Graphical Abstract
Show more [+] Less [-]Long-term responses of Scots pine (Pinus sylvestris L.) and European beech (Fagus sylvatica L.) to the contamination of light soils with diesel oil
2019
Bęś, Agnieszka | Warmiński, Kazimierz | Adomas, Barbara
Research into trees plays a very important role in evaluations of soil contamination with diesel oil. Trees are ideal for reclaiming contaminated soils because their large biomass renders them more resistant to higher concentrations of pollutants. In the literature, there is a general scarcity of long-term studies performed on trees, in particular European beeches. The aim of this study was to evaluate the responses of Scots pines and European beeches grown for 8 years on soil contaminated with diesel oil. Selected morphological and physiological parameters of trees were analyzed. The biomass yield of Scots pines was not significantly correlated with increasing concentrations of diesel oil, but it was more than 700% higher than in European beeches. Scots pines were taller and had a larger stem diameter than European beeches during the 8-year study. The diameter of trees grown on the most contaminated soil was reduced 1.5-fold in Scots pines and more than twofold in European beeches. The length of Scots pine needles from the most contaminated treatment decreased by 50% relative to control needles. The shortest needles were heaviest. The fluctuating asymmetry (FA) of needle length was highest in Scots pines grown on the most contaminated soil, whereas the reverse was noted in the FA of needle weight. Diesel oil decreased the concentrations of chlorophylls a and b, total chlorophyll, and carotenoids. The Fv/Fm ratio of needles and leaves was influenced by the tested concentrations of diesel oil. The results of the study indicate that the Scots pine better adapts (grows more rapidly and produces higher biomass) to long-term soil contamination with diesel oil than the European beech. In European beeches, growth inhibition and leaf discoloration (a decrease in chlorophyll content) were observed already after the first year of the experiment, which indicates that 1-year-old seedlings of European beech are robust bioindicators of soil contamination with diesel oil.
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