Chemical compositions of streambed biofilms from a major river of central Japan (the Kushida River) were obtained, with data of associated sediments (fine-grained fractions < 63 μm) and dissolved components of waters, in order to provide preliminary information about biogeochemical significance of streambed biofilms. During the sampling period (July 31st to August 3rd, 2013), dissolved components of the river waters were influenced by the dam reservoir. Concentrations of NO₃⁻, silica (as Si), SO₄²⁻, PO₄³⁻ and Ca²⁺ decreased across the dam, whereas Fe and Mn increased across the dam, and then decreased downstream rapidly. Streambed biofilms contain significant amount of non-nutrient elements such as Al (up to 21% as Al₂O₃ on water and others-free basis), indicating that they are contaminated as siliciclatic (silt and clay) materials. Siliciclastic materials in the biofilms are basically compositionally similar to fine-grained (<63 μm) fractions of streambed sediments. However, some elements such as Ca, P, Mn, and Zn are markedly enriched in the biofilms. Particularly, Mn concentrations in the biofilm samples collected just below the dam reservoir are very high (∼4.0 wt %), probably due to accumulation from the discharged water. Concentrations of trace elements such as P, Cr, Cu, Zn and V appear to be controlled by amounts of Fe-oxides and/or Mn-oxides in biofilms. Numbers of factors are involved in controlling chemical compositions of streambed biofilms, including amount of contaminated siliciclastics, authigenic mineral formation, adsorption of dissolved materials and microbial metabolisms. As demonstrated by this study, systematic analyses including major elements and comparison with associated sediments and waters could reveal biogeochemistry of this complex system.

The present study for the first time demonstrated the interactions of metal oxide (MO) nano-pollutants (CuO and Al2O3-NPs) with tissues and cellular DNA of tomato plants grown in soil sand: silt: clay (667:190:143) and Hoagland-hydroponic system and assessed the hazardous effects of NPs on cell physiology and biochemistry. Results of SEM equipped with EDX revealed attachment of variably shaped CuO-NPs (18 nm) and Al2O3-NPs (21 nm) on roots, and internalization followed by translocation in plants by ICP-MS and TEM. Significant variations in foliage surface area, chlorophyll, proteins, LPO, and antioxidant enzymes were recorded. Roots and shoots accumulated 225.8 ± 8.9 and 70.5 ± 4 μgAl g−1 DW, whereas Cu accumulation was 341.6 ± 14.3 (roots) and 146.9 ± 8.1 μg g−1 DW (shoots) which was significant (p ≤ 0.0005) as compared to control. The total soluble protein content in roots, shoots, and leaves collected from Al2O3-NPs treated plants increased by 120, 80, and 132%, respectively while in CuO-NPs treatments, the increase was 68 (roots), 36 (shoots), and 86% (leaves) over control. The level of antioxidant enzymes in plant tissues was significantly (p ≤ 0.05) higher at 2000 μg ml−1 of MONPs over control. A dose-dependent increase in reactive oxygen species (ROS), biphasic change of lower and higher fluorescence in mitochondria due to dissipation of mitochondrial membrane potential (ΔΨm) and membrane defects using propidium iodide were observed. Comparatively, CuO-NPs induced higher toxicity than Al2O3-NPs. Perceptible changes in proteins (amide-I & II), cellulose, glucose, galactose and other carbohydrates were observed under FT-IR. The binding studies with TmDNA showed fluorescence quenching of EtBr-TmDNA and acridine orange-TmDNA complex only by CuO-NPs with -ΔG and +ΔH and +ΔS values. However, Al2O3-NPs induced lesser change in TmDNA conformation. Conclusively, the results are novel in better demonstrating the mechanistic basis of nano-phyto-toxicity and are important which could be used to develop strategies for safe disposal of Al2O3-NPs and CuO-NPs.

The use of the soil can alter its functionality and influence the (bio)availability of any contaminants present. Our study considers two types of agricultural soils, rainfed and olive soils, managed according to conventional practices that apply contaminants directly to the soil (fertilizers, pesticides, fungicides, etc.) and receive contaminants from the atmosphere (traffic, industry, etc.); and a forest soil that is not subject to these agricultural practices. In this scenario, we consider a mixture of 16 trace elements (As, Ba, Be, Cd, Co, Cr, Cu, Hg, Mo, Ni, Pb, Se, Sb, Sn, V and Zn), since their interactions with the soil can produce synergistic and/or antagonistic effects that are not considered in most studies. We studied whether the content and (bio)availability of low concentrations of a mixture of trace elements affect the soil functionality in terms of the activity of some key enzymes We analysed the total, potentially and immediately available fractions, the soil parameters and soil enzyme activity. The results show that the functionality of the soils studied was affected despite the low concentrations of trace elements. The highest concentrations of total trace elements and available fractions were found in forest soils compared to the other two uses. Soil enzyme activity is best explained by the potentially available fraction of a mixture of trace elements and physico-chemical soil variables. In our study, pH, total nitrogen, organic carbon and fine mineral particles (silt and clay) had an influence on soil enzyme activity and the (bio)available fractions of trace elements.

Since the introduction of standardized nematode toxicity assays by the American Society for Testing and Materials (ASTM) and International Organization for Standardization (ISO), many studies have reported their use. Given that the currently used standardized nematode toxicity assays have certain limitations, in this study, we examined the use of a novel nematode offspring counting assay for evaluating soil ecotoxicity based on a previous soil-agar isolation method used to recover live adult nematodes. In this new assay, adult Caenorhabditis elegans were exposed to soil using a standardized toxicity assay procedure, and the resulting offspring in test soils attracted by a microbial food source in agar plates were counted. This method differs from previously used assays in terms of its endpoint, namely, the number of nematode offspring. The applicability of the bioassay was demonstrated using metal-spiked soils, which revealed metal concentration-dependent responses, and with 36 field soil samples characterized by different physicochemical properties and containing various metals. Principal component analysis revealed that texture fraction (clay, sand, and silt) and electrical conductivity values were the main factors influencing the nematode offspring counting assay, and these findings warrant further investigation. The nematode offspring counting assay is a rapid and simple process that can provide multi-directional toxicity assessment when used in conjunction with other standard methods.

The focus of this study was to determine the depth-wise variability of physicochemical properties (i.e., pH, TOC, TN, and EC), and heavy metals (i.e., Pb, Cu, Zn, As, and Cr) concentration, and the associated biological and ecological risks of the mangrove sediment. The accumulation of metal contents and the phytoremediation and phytoextraction were also investigated in a mangrove species, Acanthus ilicifolius. The mangrove sediment consists of a higher proportion of sand fraction (56.6–74.7%) followed by clay (10–28%) and silt (10.1–15. 7%) fractions. The concentrations (mg/kg) of Pb, Cu, Zn, As, and Cr were ranged from 22.05–34.3, 8.58–22.77, 85.07–114, 5.56–12.91, and 0.98–5.12 in all the sediment layers. The hierarchy of the mean metal concentration in sediment was Zn (102 mg/kg) > Pb (25.6 mg/kg) > Cu (14.8 mg/kg) > As (8.79 mg/kg) > Cr (2.74 mg/kg) respectively. The examined metal concentrations were below the respective average shale values (ASVs). The degree of environmental, ecological, and biological risks was minimal according to various pollution indices like geoaccumulation index (Igₑₒ), contamination factor (CF), and pollution load index (PLI). According to sediment quality guidelines (SQGs), the adverse biological risk effect was not likely to occur. The result of the potential ecological risk index (PERI) demonstrated that the study area was in the low-risk condition as the corresponded RI value < 100. A combined influence of geogenic and anthropogenic factors was identified as the metal sources by multivariate analysis. The study found that the accumulation rate of the metal contents was higher in leaves than that of roots. The mean descending metal concentration values were Zn (107) > Pb (28. 7) > Cu (16.9) > As (11.2) > Cr (4.99) in leaves and Zn (104.32) > Pb (27.02) > Cu (15.29) > As (10.39) > Cr (3.80) in roots. The translocation and bioaccumulation factors of heavy metals suggested that the mangrove plant species, A. ilicifolius can be used for phytoremediation and phytoextraction since the bio-concentration factor and translocation factor > 1. The studied species exhibited the metal tolerance associated with two following strategies, metal exclusion, and metal accumulation. However, excess metal tolerance can impact the surrounding marine environment.

Logging and plantation agriculture are vital to economies and livelihoods in tropical nations, including Papua New Guinea. To meet global demand, hundreds of thousands of ha of diverse natural habitat have been logged, cleared and replaced with monoculture crops. Resulting hydrological changes have increased sediment, nutrient and pesticide runoff, impacting down-stream habitats. Here, case studies from Kimbe Bay (New Britain) and Mullins Harbour (Milne Bay), examine effects on nearshore coral reefs. In both places, logging and oil palm development had destabilized soils and removed or degraded riparian vegetation. Downstream, nearshore reefs had high silt levels, which, coincident with minor coral bleaching and predation by crown-of-thorns starfish, were correlated with high levels of coral mortality and low coral species richness. Sediment and related impacts can be reduced by effective catchment management, such as avoiding steep slopes, expanding stream and coastal buffer zones, minimizing fertilizer and pesticide use, monitoring and reactive management.

The Conwy estuary was evaluated for sediment quality. Microtox bioassay revealed 38 of 39 sites were non-toxic. Hg ranged from 0.001 to 0.153 μg kg⁻¹, mean 0.026 mg kg⁻¹, Σ16 PAH from 18 to 1578 μg kg⁻¹, mean 269 μg kg⁻¹, Σ22 PAH, 18 to 1871 μg kg⁻¹ mean to 312 μg kg⁻¹, two sites had high perylene relative to ΣPAH. Σ22PAH correlated positively with TOC, clay and silt (R² 0.89, 0.92, 0.90) and negatively with sand. Multivariate statistics, delineated four spatial (site) and five variable (measurements) clusters. Spatial clustering relates to sediment grain size, in response to hydrodynamic processes in estuary; fine (clay to silt) sized sediments exhibit the highest Hg and PAH content, because these components partitioned into the fine fraction. Comparison to national and international environmental standards suggests Hg and PAH content of Conwy sediments are unlikely to harm ecology or transfer up into the human food chain.

The present study reports the evaluation of snippet backscatter information gathered with a high-frequency multibeam echosounder system (200–400 kHz) due to their usability to detect ammunition of different sizes in shallow coastal waters. Besides the feasibility of the snippet backscatter data, it was focused on the attainable horizontal accuracy in comparison to side-scan sonar and autonomous underwater vehicle (AUV) surveys. The data was collected in shallow coastal waters of up to 18 m water depth (Baltic Sea) close to an ammunition dumping site characterized by an almost flat seafloor covered with sand and silt sediments. The analysis of the multibeam compared to sidescan data indicates the snippet backscatter to be a promising prospective method for ammunition detection and being able to improve horizontal position accuracy of up to 0.08 m.

In this study, we carried out grain size and heavy metal analyses and also assessed heavy metal enrichment and ecological risk indices in ten sediment samples collected by the manned submersible Jiaolong at different segments of the Yap Trench. The results showed that the sediments in the Yap Trench were mainly slumping deposits composed of sandy silt. Heavy metals in the sediments showed different spatial distribution patterns from north to south direction of the trench. The distribution pattern of these heavy metals also differed in the eastern and western flanks of the trench. From the results of the enrichment factors, only arsenic, chromium, and manganese showed a slight enrichment. However, all elements were affected by natural factors. Further, most elements showed a low ecological risk, and only arsenic showed a moderate risk at two stations. Finally, the potential ecological risk of the whole study area was at a low level.

Sediment samples collected from Brisbane River were analysed for organochlorine pesticide residues (OCPs). The factors influencing OCPs distribution in the sediment were investigated using multivariate analytical tools. Thirteen OCPs were detected in the sediment with concentrations ranging between below detection to 83.9ng/g, and detection frequency >90%. With the exception of dieldrin, the OCP inputs appear to be historical and may cause adverse ecological impacts. Multi-criteria ranking of the factors influencing the OCPs (except dieldrin) distribution in the sediment revealed that TOC>silt>intensive urban land use>population>seasons. Dieldrin distribution is significantly influenced by season>TOC>silt>intensive urban land use>population. The study helps to prioritise factors required for managing OCPs contamination in sediments and identification of appropriate mitigation measures.