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Impacts of neonicotinoids on biodiversity: a critical review Full text
2025
Mamy, Laure | Pesce, Stéphane | Sanchez, Wilfried | Aviron, Stéphanie | Bedos, Carole | Berny, Philippe | Bertrand, Colette | Betoulle, Stéphane | Charles, Sandrine | Chaumot, Arnaud | Coeurdassier, Michael | Coutellec, Marie-agnès | Crouzet, Olivier | Faburé, Juliette | Fritsch, Clémentine | Gonzalez, Patrice | Hedde, Mickael | Leboulanger, Christophe | Margoum, Christelle | Mougin, Christian | Munaron, Dominique | Nélieu, Sylvie | Pelosi, Céline | Rault, Magali | Sucré, Elliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie
Impacts of neonicotinoids on biodiversity: a critical review Full text
2025
Mamy, Laure | Pesce, Stéphane | Sanchez, Wilfried | Aviron, Stéphanie | Bedos, Carole | Berny, Philippe | Bertrand, Colette | Betoulle, Stéphane | Charles, Sandrine | Chaumot, Arnaud | Coeurdassier, Michael | Coutellec, Marie-agnès | Crouzet, Olivier | Faburé, Juliette | Fritsch, Clémentine | Gonzalez, Patrice | Hedde, Mickael | Leboulanger, Christophe | Margoum, Christelle | Mougin, Christian | Munaron, Dominique | Nélieu, Sylvie | Pelosi, Céline | Rault, Magali | Sucré, Elliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie
Neonicotinoids are the most widely used class of insecticides in the world, but they have raised numerous concerns regarding their effects on biodiversity. Thus, the objective of this work was to do a critical review of the contamination of the environment (soil, water, air, biota) by neonicotinoids (acetamiprid, clothianidin, imidacloprid, thiacloprid, thiamethoxam) and of their impacts on terrestrial and aquatic biodiversity. Neonicotinoids are very frequently detected in soils and in freshwater, and they are also found in the air. They have only been recently monitored in coastal and marine environments, but some studies already reported the presence of imidacloprid and thiamethoxam in transitional or semi-enclosed ecosystems (lagoons, bays, and estuaries). The contamination of the environment leads to the exposure and to the contamination of non-target organisms and to negative effects on biodiversity. Direct impacts of neonicotinoids are mainly reported on terrestrial invertebrates (e.g., pollinators, natural enemies, earthworms) and vertebrates (e.g., birds) and on aquatic invertebrates (e.g., arthropods). Impacts on aquatic vertebrate populations and communities, as well as on microorganisms, are less documented. In addition to their toxicity to directly exposed organisms, neonicotinoid induce indirect effects via trophic cascades as demonstrated in several species (terrestrial and aquatic invertebrates). However, more data are needed to reach firmer conclusions and to get a clearer picture of such indirect effects. Finally, we identified specific knowledge gaps that need to be filled to better understand the effects of neonicotinoids on terrestrial, freshwater, and marine organisms, as well as on ecosystem services associated with these biotas.
Show more [+] Less [-]Impacts of neonicotinoids on biodiversity: a critical review Full text
2025
Mamy, Laure | Pesce, Stéphane | Sanchez, Wilfried | Aviron, Stéphanie | Bedos, Carole | Berny, Philippe | Bertrand, Colette | Betoulle, Stéphane | Charles, Sandrine | Chaumot, Arnaud | Coeurdassier, Michael | Coutellec, Marie-Agnès | Crouzet, Olivier | Fabure, Juliette | Fritsch, Clémentine | Gonzalez, Patrice | Hedde, Mickael | Leboulanger, C | Margoum, Christelle | Mougin, Christian | Munaron, Dominique | Nelieu, Sylvie | Pelosi, Céline | Rault, Magali | Sucré, Elliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie | Ecologie fonctionnelle et écotoxicologie des agroécosystèmes (ECOSYS) ; AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | RiverLy - Fonctionnement des hydrosystèmes (RiverLy) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER) | Biodiversité agroécologie et aménagement du paysage (UMR BAGAP) ; Ecole Supérieure des Agricultures (ESA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Rennes Angers ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS) | Interactions Cellules Environnement - UR (ICE) ; VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS) | Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon | Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS) | Modélisation et écotoxicologie prédictives [LBBE] ; Département biostatistiques et modélisation pour la santé et l'environnement [LBBE] ; Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire Chrono-environnement (UMR 6249) (LCE) ; Centre National de la Recherche Scientifique (CNRS)-Université de Franche-Comté (UFC) ; Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC) | Dynamique et durabilité des écosystèmes : de la source à l’océan (DECOD) ; Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut Agro Rennes Angers ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Service santé de la faune et fonctionnement des écosystèmes agricoles (OFB Service Santé Agri) ; OFB Direction de la recherche et de l’appui scientifique (OFB - DRAS) ; Office français de la biodiversité (OFB)-Office français de la biodiversité (OFB) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS) | Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | IRD, Sète, OC, SC | MARine Biodiversity Exploitation and Conservation - MARBEC (UMR MARBEC) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | Environnement Méditerranéen et Modélisation des Agro-Hydrosystèmes (EMMAH) ; Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Institut méditerranéen de biodiversité et d'écologie marine et continentale (IMBE) ; Avignon Université (AU)-Aix Marseille Université (AMU)-Institut de recherche pour le développement [IRD] : UMR237-Centre National de la Recherche Scientifique (CNRS) | Université de Mayotte (UMay) (UMay) | Unité de Recherches Animal et Fonctionnalités des Produits Animaux (URAFPA) ; Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Hydrosystèmes continentaux anthropisés : ressources, risques, restauration (UR HYCAR) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Direction de l'Expertise scientifique collective, de la Prospective et des Etudes (DEPE) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | French Office for Biodiversity (OFB) through the national Ecophyto plan
International audience | Neonicotinoids are the most widely used class of insecticides in the world but they have raised numerous concerns regarding their effects on biodiversity. Thus, the objective of this work was to do a critical review of the contamination of the environment (soil, water, air, biota) by neonicotinoids (acetamiprid, clothianidin, imidacloprid, thiacloprid, thiamethoxam) and of their impacts on terrestrial and aquatic biodiversity. Neonicotinoids are very frequently detected in soils and in freshwater, and they are also found in the air. They have only been recently monitored in coastal and marine environments, but some studies already reported the presence of imidacloprid and thiamethoxam in transitional or semi-enclosed ecosystems (lagoons, bays and estuaries). The contamination of the environment leads to the exposure and to the contamination of non-target organisms, and to negative effects on biodiversity. Direct impacts of neonicotinoids are mainly reported on terrestrial invertebrates (e.g., pollinators, natural enemies, earthworms) and vertebrates (e.g., birds), and on aquatic invertebrates (e.g., arthropods). Impacts on aquatic vertebrate populations and communities, as well as on microorganisms, are less documented. In addition to their toxicity to directly exposed organisms, neonicotinoid induce indirect effects via trophic cascades as demonstrated in several species (terrestrial and aquatic invertebrates). However, more data are needed to reach firmer conclusions and to get a clearer picture of such indirect effects. Finally, we identified specific knowledge gaps that need to be filled to better understand the effects of neonicotinoids on terrestrial, freshwater and marine organisms, as well as on ecosystem services associated with these biotas.
Show more [+] Less [-]Linking ecotoxicological effects on biodiversity and ecosystem functions to impairment of ecosystem services is a challenge: an illustration with the case of plant protection products Full text
2025
Pesce, Stéphane | Bérard, Annette | Coutellec, Marie-agnès | Hedde, Mickaël | Langlais-hesse, Alexandra | Larras, Floriane | Leenhardt, Sophie | Mongruel, Remi | Munaron, Dominique | Sabater, Sergi | Gallai, Nicola
Linking ecotoxicological effects on biodiversity and ecosystem functions to impairment of ecosystem services is a challenge: an illustration with the case of plant protection products Full text
2025
Pesce, Stéphane | Bérard, Annette | Coutellec, Marie-agnès | Hedde, Mickaël | Langlais-hesse, Alexandra | Larras, Floriane | Leenhardt, Sophie | Mongruel, Remi | Munaron, Dominique | Sabater, Sergi | Gallai, Nicola
There is growing interest in using the ecosystem services framework for environmental risk assessments of chemicals, including plant protection products (PPPs). Although this topic is increasingly discussed in the recent scientific literature, there is still a substantial gap between most ecotoxicological studies and a solid evaluation of potential ecotoxicological consequences on ecosystem services. This was recently highlighted by a collective scientific assessment (CSA) performed by 46 scientific experts who analyzed the international science on the impacts of PPPs on biodiversity, ecosystem functions, and ecosystem services. Here, we first point out the main obstacles to better linking knowledge on the ecotoxicological effects of PPPs on biodiversity and ecological processes with ecosystem functions and services. Then, we go on to propose and discuss possible pathways for related improvements. We describe the main processes governing the relationships between biodiversity, ecological processes, and ecosystem functions in response to effects of PPP, and we define categories of ecosystem functions that could be directly linked with the ecological processes used as functional endpoints in investigations on the ecotoxicology of PPPs. We then explore perceptions on the possible links between these categories of ecosystem functions and ecosystem services among a sub-panel of the scientific experts from various fields of environmental science. We find that these direct and indirect linkages still need clarification. This paper, which reflects the difficulties faced by the multidisciplinary group of researchers involved in the CSA, suggests that the current gap between most ecotoxicological studies and a solid potential evaluation of ecotoxicological consequences on ecosystem services could be partially addressed if concepts and definitions related to ecological processes, ecosystem functions, and ecosystem services were more widely accepted and shared within the ecotoxicology community. Narrowing this gap would help harmonize and extend the science that informs decision-making and policy-making, and ultimately help to better address the trade-off between social benefits and environmental losses caused by the use of PPPs.
Show more [+] Less [-]Linking ecotoxicological effects on biodiversity and ecosystem functions to impairment of ecosystem services is a challenge: an illustration with the case of plant protection products Full text
2025
Pesce, Stéphane | Bérard, Annette | Coutellec, Marie-Agnès | Hedde, Mickaël | Langlais-Hesse, Alexandra | Larras, Floriane | Leenhardt, Sophie | Mongruel, Rémi | Munaron, Dominique | Sabater, Sergi | Gallai, Nicola | RiverLy - Fonctionnement des hydrosystèmes (RiverLy) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Environnement Méditerranéen et Modélisation des Agro-Hydrosystèmes (EMMAH) ; Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Dynamique et durabilité des écosystèmes : de la source à l’océan (DECOD) ; Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut Agro Rennes Angers ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Institut de l'Ouest : Droit et Europe (IODE) ; Université de Rennes (UR)-Centre National de la Recherche Scientifique (CNRS) | Knowledge & Research in Environment And Toxicology In Silico (KREATIS) | Direction de l'Expertise scientifique collective, de la Prospective et des Etudes (DEPE) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Aménagement des Usages des Ressources et des Espaces marins et littoraux - Centre de droit et d'économie de la mer (AMURE) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS) | MARine Biodiversity Exploitation and Conservation - MARBEC (UMR MARBEC) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | Universitat de Girona = University of Girona (UdG) | École Nationale Supérieure de Formation de l'Enseignement Agricole de Toulouse-Auzeville (ENSFEA) | Laboratoire d'Etude et de Recherche sur l'Economie, les Politiques et les Systèmes Sociaux (LEREPS) ; Université Toulouse Capitole (UT Capitole) ; Communauté d'universités et établissements de Toulouse (Comue de Toulouse)-Communauté d'universités et établissements de Toulouse (Comue de Toulouse)-Université Toulouse - Jean Jaurès (UT2J) ; Communauté d'universités et établissements de Toulouse (Comue de Toulouse)-Communauté d'universités et établissements de Toulouse (Comue de Toulouse)-Institut d'Études Politiques [IEP] - Toulouse-École Nationale Supérieure de Formation de l'Enseignement Agricole de Toulouse-Auzeville (ENSFEA) | This collective scientific assessment received financial support from the French Office for Biodiversity (OFB) through the national ECOPHYTO plan. | ANR-11-LABX-0066,SMS/SSW,Structurations des mondes sociaux(2011)
International audience | There is growing interest in using the ecosystem services framework for environmental risk assessments of chemicals, including plant protection products (PPPs). Although this topic is increasingly discussed in the recent scientific literature, there is still a substantial gap between most ecotoxicological studies and a solid evaluation of potential ecotoxicological consequences on ecosystem services. This was recently highlighted by a collective scientific assessment (CSA) performed by 46 scientific experts who analyzed the international science on the impacts of PPPs on biodiversity, ecosystem functions, and ecosystem services. Here, we first point out the main obstacles to better linking knowledge on the ecotoxicological effects of PPPs on biodiversity and ecological processes with ecosystem functions and services. Then, we go on to propose and discuss possible pathways for related improvements. We describe the main processes governing the relationships between biodiversity, ecological processes, and ecosystem functions in response to effects of PPP, and we define categories of ecosystem functions that could be directly linked with the ecological processes used as functional endpoints in investigations on the ecotoxicology of PPPs. We then explore perceptions on the possible links between these categories of ecosystem functions and ecosystem services among a sub-panel of the scientific experts from various fields of environmental science. We find that these direct and indirect linkages still need clarification. This paper, which reflects the difficulties faced by the multidisciplinary group of researchers involved in the CSA, suggests that the current gap between most ecotoxicological studies and a solid potential evaluation of ecotoxicological consequences on ecosystem services could be partially addressed if concepts and definitions related to ecological processes, ecosystem functions, and ecosystem services were more widely accepted and shared within the ecotoxicology community. Narrowing this gap would help harmonize and extend the science that informs decision-making and policy-making, and ultimately help to better address the trade-off between social benefits and environmental losses caused by the use of PPPs.
Show more [+] Less [-]Variability of the optical signatures of dissolved organic matter in soils of different mangrove stands (Ouvéa, New Caledonia) Full text
2025
Mouras, Naina | Lemonnier, Hugues | Crossay, Thomas | Gututauava, Kapeliele | Mathian, Maximilien | Robin, Sarah Louise | Tardivel, Océane | Marchand, Cyril
Mangrove ecosystems are known to play a key role in the global carbon cycle, due to their productivity and their ability for carbon sequestration both in the biomass and in the soil. In the latter, various geochemical processes lead to the production of dissolved organic matter (DOM) that can be exported through tidal pumping and then constitute an important source of organic carbon for adjacent ecosystems. DOM characteristics, and their variabilities, within mangrove soils depend on several factors, including the mangrove species, yet these variations and their origin still need to be precisely constrained. This study examined DOM sources in soils of a carbonate atoll mangrove (Ouvéa, New Caledonia), focusing on two tree species, Rhizophora apiculata and Bruguiera gymnorhiza, at different growth stages. We analysed porewater properties and DOM optical characteristics through spectroscopic and EEM-PARAFAC methods. Our results indicate distinct TOC and DOC concentrations across species, with mature B. gymnorhiza soils showing the highest TOC content (~ 30%) but the lowest DOC content (32 mg L−1). These differences seem not to be directly related to site physicochemical conditions (redox, pH, salinity) but may rather reflect differences in DOM sources and production, notably due to different symbiotic relationships with mycorrhizal fungi, which influence microbial activity and organic matter diagenesis. DOM absorbance patterns also varied significantly between species: Beneath R. apiculata, DOM had higher protein-like and fulvic-like fluorescence, indicating fresher organic matter, while beneath B. gymnorhiza, especially in mature stands, DOM was more humified, suggesting older OM because of a possible long-term accumulation due to the basin-like morphology of this site.
Show more [+] Less [-]Characterizing environmental contamination by plant protection products along the land-to-sea continuum:a focus on France and French overseas territories Full text
2025
Margoum, Christelle | Bedos, Carole | Munaron, Dominique | Nélieu, Sylvie | Achard, Anne-laure | Pesce, Stéphane
Characterizing environmental contamination by plant protection products along the land-to-sea continuum:a focus on France and French overseas territories Full text
2025
Margoum, Christelle | Bedos, Carole | Munaron, Dominique | Nélieu, Sylvie | Achard, Anne-laure | Pesce, Stéphane
Environmental compartments are contaminated by a broad spectrum of plant protection products (PPPs) that are currently widely used in agriculture or, for some of them, whose use was banned many years ago. The aim of this study is to draw up an overview of the levels of contamination of soils, continental aquatic environments, seawaters and atmosphere by organic PPPs in France and the French overseas territories, based on data from the scientific publications and the grey literature. It is difficult to establish an exhaustive picture of the overall contamination of the environment because the various compartments monitored, the monitoring frequencies, the duration of the studies and the lists of substances are not the same. Of the 33 PPPs most often recorded at high concentration levels in at least one compartment, 5 are insecticides, 9 are fungicides, 15 are herbicides and 4 are transformation products. The PPP contamination of the environment shows generally a seasonal variation according to crop cycles. On a pluriannual scale, the contamination trends are linked to the level of use driven by the pest pressure, and especially to the ban of PPP. Overall, the quality of the data acquired has been improved thanks to new, more integrative sampling strategies and broad-spectrum analysis methods that make it possible to incorporate the search for emerging contaminants such as PPP transformation products. Taking into account additional information (such as the quantities applied, agricultural practices, meteorological conditions, the properties of PPPs and environmental conditions) combined with modelling tools will make it possible to better assess and understand the fate and transport of PPPs in the environment, inter-compartment transfers and to identify their potential impacts. Simultaneous monitoring of all environmental compartments as well as biota in selected and limited relevant areas would also help in this assessment.
Show more [+] Less [-]Characterizing environmental contamination by plant protection products along the land-to-sea continuum:a focus on France and French overseas territories Full text
2025
Margoum, Christelle | Bedos, Carole | Munaron, Dominique | Nélieu, Sylvie | Achard, Anne-Laure | Pesce, Stéphane | RiverLy - Fonctionnement des hydrosystèmes (RiverLy) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Ecologie fonctionnelle et écotoxicologie des agroécosystèmes (ECOSYS) ; AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | MARine Biodiversity Exploitation and Conservation - MARBEC (UMR MARBEC) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | Département Ecosystèmes aquatiques, ressources en eau et risques - INRAE (AQUA) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
International audience | Environmental compartments are contaminated by a broad spectrum of plant protection products (PPPs) that are currently widely used in agriculture or, for some of them, whose use was banned many years ago. The aim of this study is to draw up an overview of the levels of contamination of soils, continental aquatic environments, seawaters and atmosphere by organic PPPs in France and the French overseas territories, based on data from the scientific publications and the grey literature. It is difficult to establish an exhaustive picture of the overall contamination of the environment because the various compartments monitored, the monitoring frequencies, the duration of the studies and the lists of substances are not the same. Of the 33 PPPs most often recorded at high concentration levels in at least one compartment, 5 are insecticides, 9 are fungicides, 15 are herbicides and 4 are transformation products. The PPP contamination of the environment shows generally a seasonal variation according to crop cycles. On a pluriannual scale, the contamination trends are linked to the level of use driven by the pest pressure, and especially to the ban of PPP. Overall, the quality of the data acquired has been improved thanks to new, more integrative sampling strategies and broad-spectrum analysis methods that make it possible to incorporate the search for emerging contaminants such as PPP transformation products. Taking into account additional information (such as the quantities applied, agricultural practices, meteorological conditions, the properties of PPPs and environmental conditions) combined with modelling tools will make it possible to better assess and understand the fate and transport of PPPs in the environment, inter-compartment transfers and to identify their potential impacts. Simultaneous monitoring of all environmental compartments as well as biota in selected and limited relevant areas would also help in this assessment.
Show more [+] Less [-]Screening of biofuel ash chemical composition and potential environmental risk caused by heavy metals: a six-year study in Lithuania / Full text
2025
Bunevičienė, Kristina, | Barčauskaitė, Karolina, | Drapanauskaitė, Donata, | Gvildienė, Karolina, | Antanaitis, Šarūnas, | Mažeika, Romas,
The growing popularity of biofuels has resulted in the generation of large amounts of biofuel ash, which is rich in nutrients. Biofuel ash is an excellent source of raw material in a circular economy. However, often biofuel ash is contaminated with heavy metals. Therefore, it is important to assess and monitor the chemical composition of biofuel ash to best utilize the potential of it. Study represents six years of data on biofuel ash collected from various boilers across Lithuania. It presents the chemical composition of biofuel ash, an environmental risk assessment, and predictive modelling was performed to estimate the doubling time of background concentrations of heavy metals in soil. The study results showed that concentrations of inorganic pollutants in biofuel ash vary significantly from year to year. When assessing the potential use for biofuel ash in agriculture and forestry, it was found that about 30 % of biofuel ash samples had Cd concentrations exceeding the maximum allowable limits for use in agriculture, more than 50 % – forestry. The Cr concentration exceeded in more than 50 % of tested samples for use in agriculture, about in 20 % – forestry. The estimated cumulative potential ecological risk to the environment is very high, which is determined by the high (Cd) or medium (Hg, Cu) risk of individual metals. Also, after evaluating the 6-year results, it was determined that the use of biofuel ash is limited by Cd, Zn since the background level of these metals in the soil would double most likely after 17 and 27 years.
Show more [+] Less [-]Mission Tara Microplastics: a holistic set of protocols and data resources for the field investigation of plastic pollution along the land-sea continuum in Europe Full text
2025
Ghiglione, Jean-françois | Barbe, Valérie | Bruzaud, Stéphane | Burgaud, Gaëtan | Cachot, Jerome | Eyheraguibel, Boris | Lartaud, Franck | Ludwig, Wolfgang | Meistertzheim, Anne-leila | Paul Pont, Ika | Pesant, Stéphane | Ter Halle, Alexandra | Thiebeauld, Odon | The Mission Tara Microplastics Consortium,
Abstract The Tara Microplastics mission was conducted for 7 months to investigate plastic pollution along nine major rivers in Europe—Thames, Elbe, Rhine, Seine, Loire, Garonne, Ebro, Rhone, and Tiber. An extensive suite of sampling protocols was applied at four to five sites on each river along a salinity gradient from the sea and the outer estuary to downstream and upstream of the first heavily populated city. Biophysicochemical parameters including salinity, temperature, irradiance, particulate matter, large and small microplastics (MPs) concentration and composition, prokaryote and microeukaryote richness, and diversity on MPs and in the surrounding waters were routinely measured onboard the French research vessel Tara or from a semi-rigid boat in shallow waters. In addition, macroplastic and microplastic concentrations and composition were determined on river banks and beaches. Finally, cages containing either pristine pieces of plastics in the form of films or granules, and others containing mussels were immersed at each sampling site, 1 month prior to sampling in order to study the metabolic activity of the plastisphere by meta-OMICS and to run toxicity tests and pollutants analyses. Here, we fully described the holistic set of protocols designed for the Mission Tara Microplastics and promoted standard procedures to achieve its ambitious goals: (1) compare traits of plastic pollution among European rivers, (2) provide a baseline of the state of plastic pollution in the Anthropocene, (3) predict their evolution in the frame of the current European initiatives, (4) shed light on the toxicological effects of plastic on aquatic life, (5) model the transport of microplastics from land towards the sea, and (6) investigate the potential impact of pathogen or invasive species rafting on drifting plastics from the land to the sea through riverine systems.
Show more [+] Less [-]The use of copper as plant protection product contributes to environmental contamination and resulting impacts on terrestrial and aquatic biodiversity and ecosystem functions Full text
2025
Pesce, Stéphane | Mamy, Laure | Sanchez, Wilfried | Artigas, Joan | Bérard, Annette | Betoulle, Stéphane | Chaumot, Arnaud | Coutellec, Marie-agnès | Crouzet, Olivier | Faburé, Juliette | Hedde, Mickael | Leboulanger, Christophe | Margoum, Christelle | Martin-laurent, Fabrice | Morin, Soizic | Mougin, Christian | Munaron, Dominique | Nélieu, Sylvie | Pelosi, Céline | Leenhardt, Sophie
The use of copper as plant protection product contributes to environmental contamination and resulting impacts on terrestrial and aquatic biodiversity and ecosystem functions Full text
2025
Pesce, Stéphane | Mamy, Laure | Sanchez, Wilfried | Artigas, Joan | Bérard, Annette | Betoulle, Stéphane | Chaumot, Arnaud | Coutellec, Marie-agnès | Crouzet, Olivier | Faburé, Juliette | Hedde, Mickael | Leboulanger, Christophe | Margoum, Christelle | Martin-laurent, Fabrice | Morin, Soizic | Mougin, Christian | Munaron, Dominique | Nélieu, Sylvie | Pelosi, Céline | Leenhardt, Sophie
Copper-based plant protection products (PPPs) are widely used in both conventional and organic farming, and to a lesser extent for non-agricultural maintenance of gardens, greenspaces, and infrastructures. The use of copper PPPs adds to environmental contamination by this trace element. This paper aims to review the contribution of these PPPs to the contamination of soils and waters by copper in the context of France (which can be extrapolated to most of the European countries), and the resulting impacts on terrestrial and aquatic biodiversity, as well as on ecosystem functions. It was produced in the framework of a collective scientific assessment on the impacts of PPPs on biodiversity and ecosystem services in France. Current science shows that copper, which persists in soils, can partially transfer to adjacent aquatic environments (surface water and sediment) and ultimately to the marine environment. This widespread contamination impacts biodiversity and ecosystem functions, chiefly through its effects on phototrophic and heterotrophic microbial communities, and terrestrial and aquatic invertebrates. Its effects on other biological groups and biotic interactions remain relatively under-documented.
Show more [+] Less [-]The use of copper as plant protection product contributes to environmental contamination and resulting impacts on terrestrial and aquatic biodiversity and ecosystem functions Full text
2025
Pesce, Stéphane | Mamy, Laure | Sanchez, Wilfried | Artigas, Joan | Bérard, Annette | Betoulle, Stéphane | Chaumot, Arnaud | Coutellec, Marie-Agnès | Crouzet, Olivier | Faburé, Juliette | Hedde, Mickael | Leboulanger, Christophe | Margoum, Christelle | Martin-Laurent, Fabrice | Morin, Soizic | Mougin, Christian | Munaron, Dominique | Nélieu, Sylvie | Pelosi, Céline | Leenhardt, Sophie | RiverLy - Fonctionnement des hydrosystèmes (RiverLy) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Ecologie fonctionnelle et écotoxicologie des agroécosystèmes (ECOSYS) ; AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER) | Laboratoire Microorganismes : Génome et Environnement (LMGE) ; Centre National de la Recherche Scientifique (CNRS)-Université Clermont Auvergne (UCA) | Environnement Méditerranéen et Modélisation des Agro-Hydrosystèmes (EMMAH) ; Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Stress Environnementaux et BIOsurveillance des milieux aquatiques (SEBIO) ; Institut National de l'Environnement Industriel et des Risques (INERIS)-Université de Reims Champagne-Ardenne (URCA)-Université Le Havre Normandie (ULH) ; Normandie Université (NU)-Normandie Université (NU)-SFR Condorcet ; Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS)-Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS) | Dynamique et durabilité des écosystèmes : de la source à l’océan (DECOD) ; Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut Agro Rennes Angers ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Service santé de la faune et fonctionnement des écosystèmes agricoles (OFB Service Santé Agri) ; OFB Direction de la recherche et de l’appui scientifique (OFB - DRAS) ; Office français de la biodiversité (OFB)-Office français de la biodiversité (OFB) | Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | MARine Biodiversity Exploitation and Conservation - MARBEC (UMR MARBEC) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | Agroécologie [Dijon] ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Dijon ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université Bourgogne Europe (UBE) | Ecosystèmes aquatiques et changements globaux (UR EABX) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Direction de l'Expertise scientifique collective, de la Prospective et des Etudes (DEPE) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | OFB (Plan Ecophyto)
International audience | Copper-based plant protection products (PPPs) are widely used in both conventional and organic farming, and to a lesser extent for non-agricultural maintenance of gardens, greenspaces, and infrastructures. The use of copper PPPs adds to environmental contamination by this trace element. This paper aims to review the contribution of these PPPs to the contamination of soils and waters by copper in the context of France (which can be extrapolated to most of the European countries), and the resulting impacts on terrestrial and aquatic biodiversity, as well as on ecosystem functions. It was produced in the framework of a collective scientific assessment on the impacts of PPPs on biodiversity and ecosystem services in France. Current science shows that copper, which persists in soils, can partially transfer to adjacent aquatic environments (surface water and sediment) and ultimately to the marine environment. This widespread contamination impacts biodiversity and ecosystem functions, chiefly through its effects on phototrophic and heterotrophic microbial communities, and terrestrial and aquatic invertebrates. Its effects on other biological groups and biotic interactions remain relatively under-documented.
Show more [+] Less [-]A Pan-European study of the bacterial plastisphere diversity along river-to-sea continuums Full text
2025
Philip, Léna | Chapron, Leila | Barbe, Valérie | Burgaud, Gaëtan | Calvès, Isabelle | Paul-pont, Ika | Thiébeauld, Odon | Sperandio, Brice | Navarro, Lionel | Ter Halle, Alexandra | Eyheraguibel, Boris | Ludwig, Wolfgang | Palazot, Maialen | Kedzierski, Mikael | Meistertzheim, Anne-leila | Ghiglione, Jean-françois
Microplastics provide a persistent substrate that can facilitate microbial transport across ecosystems. Since most marine plastic debris originates from land and reaches the ocean through rivers, the potential dispersal of freshwater bacteria into the sea represents a significant concern. To address this question, we explored the plastisphere on microplastic debris (MPs) and on pristine microplastics (pMPs) as well as the bacteria living in surrounding waters, along the river-sea continuum in nine major European rivers sampled during the 7 months of the Tara Microplastics mission. In both marine and riverine waters, we found a clear niche partitioning among MPs and pMPs plastispheres when compared to the bacteria living in the surrounding waters. Across this large dataset, we found that bacterial community structure varied along the river salinity gradient, with plastisphere communities exhibiting almost complete segregation between freshwater and marine ecosystems. We also described for the first time a virulent human pathogenic bacterium (Shewanella putrefaciens), capable of infecting human intestinal epithelial cells, detected exclusively on MPs in riverine environments. Our findings indicate that salinity is the main driver of plastisphere communities along the river-to-sea continuum, helping to mitigate the risk of pathogens transfer between freshwater and marine systems.
Show more [+] Less [-]Preserving biodiversity from plant protection products demands to make them contaminants of re-emerging concern Full text
2025
Pesce, Stéphane | Sanchez, Wilfried | Leenhardt, Sophie | Mamy, Laure
Key learnings from the collective scientific assessment on the effects of plant protection products on biodiversity and ecosystem services
Show more [+] Less [-]On Dracograllus miguelitus sp. nov. (Nematoda: Draconematidae) from an inactive structure: insights into its taxonomy, biodiversity and ecology at hydrothermal vents Full text
2025
Johnson Da Silva, William | Zeppilli, Daniela | Foulon, Valentin | Dessandier, Pierre-antoine | Matabos, Marjolaine | Sarrazin, Jozee
Background. Hydrothermal vent fields are habitats to a diverse array of benthic organisms, including several nematode species, which represent a significant portion of the biodiversity in these environments. Despite their ecological importance, most research on hydrothermal vents has focused on macro-invertebrates. As a result, vent nematode biodiversity remains largely unexplored, especially in peripheral and inactive structures, underscoring the need for further investigation. A sampling program conducted in 2017 and 2018 along a gradient of venting activity led to the collection of a number of Draconematidae species in various habitats. In this paper, we introduce Dracograllus miguelitus sp. nov., the first species of the genus described at a hydrothermal vent field, sampled from a visually inactive sulphide structure. Methods. The samples were collected at the Lucky Strike vent field, on the Mid-Atlantic Ridge, using the suction sampler of the Remotely Operated Vehicle Victor6000. Specimens were retrieved from an edifice covered by a black layer of manganese oxy-hydroxides, with no local visible hydrothermal activity, at a depth of 1,649 m depth. Samples were sieved on a 32 µm mesh onboard, sorted and, for nematodes, identified to species level back in the lab. Fluorescent images were obtained using the ApoTome Fluorescence Microscope Module, and 3D observations were possible through the depth change method. Results. We established D. miguelitus sp. nov. as a new species based on the combination of the following characters: four cephalic adhesive tubes (CATs), an elongated loop-shaped amphid with varying branch sizes between males and females, and a circular amphid in juveniles. Additionally, females display a minute setae emerging from the vulvar aperture. In males, the posterior adhesive tubes (PATs) are arranged in four longitudinal rows: two sublateral rows, each containing 10-12 PATs, and two subventral rows, consisting of 10 PATs in each. In females, sublateral and subventral rows with 13 PATs each. So far, D. miguelitus sp. nov. is the first species of the genus to be described from a hydrothermal environment and the deepest one. Beyond the formal description of this new species, we provide ecological and taxonomic backgrounds on Draconematidae at hydrothermal vents, with insights into the genus distribution, biogeography, and nomenclatural issues. Conclusion. This discovery contributes to the knowledge of Draconematidae biodiversity, and highlights the importance to investigate nematode communities at species-level, data that is often missing at vent studies. Additionally, it underscores the significance of preserving inactive hydrothermal habitats, which are threatened by deep-sea mining activities. | Contexte. Les champs hydrothermaux abritent une diversité remarquable d’organismes benthiques, incluant plusieurs espèces de nématodes, qui représentent une part importante de la biodiversité de ces environnements. Malgré leur rôle écologique, la majorité des recherches sur les sources hydrothermales se sont concentrées sur les macro-invertébrés. Par conséquent, la biodiversité des nématodes de ces systèmes reste largement méconnue, en particulier dans les structures périphériques et inactives, soulignant la nécessité d’investigations supplémentaires. Un programme d’échantillonnage mené en 2017 et 2018 le long d’un gradient d’activité hydrothermale a permis la collecte de plusieurs espèces de Draconematidae dans divers habitats. Dans cet article, nous présentons Dracograllus miguelitus sp. nov., la première espèce du genre décrite dans un champ hydrothermal, collectée sur une structure de sulfures visuellement inactive. Méthodes. Les échantillons ont été récoltés sur le site hydrothermal Lucky Strike, situé sur la dorsale médio-atlantique, à l’aide du système d’aspiration du véhicule téléopéré Victor6000. Les spécimens proviennent d’un édifice recouvert d’une couche noire d’oxydes et d’oxyhydroxydes de manganèse, sans activité hydrothermale visible localement, à une profondeur de 1 649 m. Les échantillons ont été tamisés à bord sur une maille de 32 µm, triés, puis les nématodes ont été identifiés au niveau spécifique au laboratoire. Des images fluorescentes ont été obtenues à l’aide du module de microscope à fluorescence ApoTome, et des observations 3D ont été réalisées par la méthode de variation de profondeur. Résultats. D. miguelitus sp. nov. a été définie comme une nouvelle espèce sur la base des caractères suivants : quatre tubes adhésifs céphaliques (CATs), un amphide en boucle allongée avec des branches de tailles différentes chez les mâles et les femelles, et un amphide circulaire chez les juvéniles. Les femelles présentent également une soie minuscule émergeant de l’orifice vulvaire. Chez les mâles, les tubes adhésifs postérieurs (PATs) sont disposés en quatre rangées longitudinales : deux rangées sublatérales, contenant chacune 10 à 12 PATs, et deux rangées subventrales, comportant 10 PATs chacune. Chez les femelles, les rangées sublatérales et subventrales comptent chacune 13 PATs. À ce jour, D. miguelitus sp. nov. est la première espèce du genre décrite dans un environnement hydrothermal, et la plus profonde connue. En plus de la description formelle de cette nouvelle espèce, nous fournissons des éléments écologiques et taxonomiques sur les Draconematidae des sources hydrothermales, ainsi que des données sur la distribution, la biogéographie et des considérations nomenclaturales du genre. Conclusion. Cette découverte enrichit les connaissances sur la biodiversité des Draconematidae et souligne l’importance d’étudier les communautés de nématodes à l’échelle spécifique, un niveau d’information souvent négligé dans les études hydrothermales. Elle met également en évidence l’importance de préserver les habitats hydrothermaux inactifs, menacés par les activités d’exploitation minière en haute mer. | Contexto. Os campos hidrotermais são habitats que abrigam uma grande diversidade de organismos bentônicos, incluindo diversas espécies de nematódeos, que representam uma parte significativa da biodiversidade nesses ambientes. Apesar de sua importância ecológica, a maior parte das pesquisas em fontes hidrotermais tem se concentrado nos macroinvertebrados. Como resultado, a biodiversidade de nematódeos nesses sistemas permanece amplamente inexplorada, especialmente em estruturas periféricas e inativas, destacando a necessidade de investigações adicionais. Um programa de amostragem realizado em 2017 e 2018 ao longo de um gradiente de atividade hidrotermal permitiu a coleta de diversas espécies da família Draconematidae em diferentes habitats. Neste artigo, apresentamos Dracograllus miguelitus sp. nov., a primeira espécie do gênero descrita em um campo hidrotermal, coletada em uma estrutura de sulfetos visualmente inativa. Métodos. As amostras foram coletadas no campo hidrotermal Lucky Strike, localizado na Dorsal Mesoatlântica, utilizando o sistema de sucção do Veículo Operado Remotamente Victor6000. Os espécimes foram obtidos em um edifício coberto por uma camada preta de óxidos e oxi-hidróxidos de manganês, sem atividade hidrotermal visível localmente, a uma profundidade de 1.649 metros. As amostras foram peneiradas a bordo com malha de 32 µm, triadas e, no caso dos nematódeos, identificadas em nível de espécie no laboratório. Imagens fluorescentes foram obtidas com o módulo de microscopia de fluorescência ApoTome, e observações tridimensionais foram realizadas por meio da técnica de variação de profundidade. Resultados. D. miguelitus sp. nov. foi estabelecida como uma nova espécie com base na combinação dos seguintes caracteres: quatro tubos adesivos cefálicos (CATs), um anfídeo em forma de alça alongada com ramificações de tamanhos diferentes entre machos e fêmeas, e um anfídeo circular nos juvenis. As fêmeas apresentam ainda uma ceta diminuta emergindo da abertura vulvar. Nos machos, os tubos adesivos posteriores (PATs) estão dispostos em quatro fileiras longitudinais: duas sublaterais, com 10 a 12 PATs cada, e duas fileiras subventrais, com 10 PATs cada. Nas fêmeas, as fileiras sublaterais e subventrais contêm 13 PATs cada. Até o momento, D. miguelitus sp. nov. é a primeira espécie do gênero descrita em um ambiente hidrotermal, além de ser a mais profunda registrada. Para além da descrição formal da nova espécie, fornecemos informações ecológicas e taxonômicas sobre os Draconematidae em fontes hidrotermais, incluindo dados sobre a distribuição do gênero, sua biogeografia e aspectos nomenclaturais. Conclusão. Esta descoberta contribui para o conhecimento da biodiversidade dos Draconematidae e destaca a importância de investigar comunidades de nematódeos em nível específico, uma informação frequentemente ausente em estudos hidrotermais. Além disso, ressalta a relevância da preservação de habitats hidrotermais inativos, que estão ameaçados por atividades de mineração em águas profundas.
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