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Earthworm and arbuscular mycorrhiza interactions: Strategies to motivate antioxidant responses and improve soil functionality Full text
2021
Wang, Gen | Wang, Li | Ma, Fang | Yang, Dongguang | You, Yongqiang
Earthworms and arbuscular mycorrhizal fungi (AMF) act synergistically in the rhizosphere and may increase host plant tolerance to Cd. However, mechanisms by which earthworm-AMF-plant partnerships counteract Cd phytotoxicity are unknown. Thus, we evaluated individual and interactive effects of these soil organisms on photosynthesis, antioxidant capacity, and essential nutrient uptake by Solanum nigrum, as well as on soil quality following Cd exposure (0–120 mg kg⁻¹). Decreases in biomass and photosynthetic activity, as well as nutrient imbalances were observed in Cd-stressed plants; however, the addition of AMF and earthworms reversed these effects. Cd exposure increased superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities, whereas inoculation with Rhizophagus intraradices decreased those. Soil enzymatic activity decreased by 15–60% with increasing Cd concentrations. However, Cd-mediated toxicity was partially reversed by soil organisms. Earthworms and AMF ameliorated soil quality based on soil enzyme activity. At 120 mg kg⁻¹ Cd, the urease, catalase, and acid phosphatase activities were 1.6-, 1.4-, and 1.2-fold higher, respectively, in soils co-incubated with earthworms and AMF than in uninoculated soil. Cd inhibited shoot Fe and Ca phytoaccumulation, whereas AMF and earthworms normalized the status of essential elements in plants. Cd detoxification by earthworm-AMF-S. nigrum symbiosis was manifested by increases in plant biomass accumulation (22–117%), chlorophyll content (17–63%), antioxidant levels (SOD 10–18%, POD 9–25%, total polyphenols 17–22%, flavonoids 15–29%, and glutathione 7–61%). It also ameliorated the photosynthetic capacity, and macro- and micronutrient statuses of plants; markedly reduced the levels of malondialdehyde (20–27%), superoxide anion (29–36%), and hydrogen peroxide (19–30%); and upregulated the transcription level of FeSOD. Thus, the combined action of earthworms and AMF feasibly enhances metal tolerance of hyperaccumulating plants and improves the quality of polluted soil.
Show more [+] Less [-]Enhanced reduction of lead bioavailability in phosphate mining wasteland soil by a phosphate-solubilizing strain of Pseudomonas sp., LA, coupled with ryegrass (Lolium perenne L.) and sonchus (Sonchus oleraceus L.) Full text
2021
Xiao, Chunqiao | Guo, Shuyu | Wang, Qi | Chi, Ruan
Due to ecologically unsustainable mining strategies, there remain large areas of phosphate mining wasteland contaminated with accumulated lead (Pb). In this study, a Pb-resistant phosphate-solubilizing strain of Pseudomonas sp., LA, isolated from phosphate mining wasteland, was coupled with two species of native plants, ryegrass (Lolium perenne L.) and sonchus (Sonchus oleraceus L.), for use in enhancing the reduction of bioavailable Pb in soil from a phosphate mining wasteland. The effect of PbCO₃ solubilization by Pseudomonas sp. strain LA was evaluated in solution culture. It was found that strain LA could attain the best solubilization effect on insoluble Pb when the PbCO₃ concentration was 1% (w/v). Pot experiments were carried out to investigate the potential of remediation by ryegrass and sonchus in phosphate mining wastelands with phosphate rock application and phosphate-solubilizing bacteria inoculation. Compared to the control group without strain LA inoculation, the biomass and length of ryegrass and sonchus were markedly increased, available P and Pb in roots increased by 22.2%–325% and 23.3%–368%, respectively, and available P and Pb in above-ground parts increased by 4.44%–388% and 1.67%–303%, respectively, whereas available Pb in soil decreased by 14.1%–27.3%. These results suggest that the combination of strain LA and plants is a bioremediation strategy with considerable potential and could help solve the Pb-contamination problem in phosphate mining wastelands.
Show more [+] Less [-]Warming enhances the cadmium toxicity on macrophyte Myriophyllum aquaticum (Vell.) Verd. seedlings Full text
2021
Wang, Lei | Gao, Yuxuan | Wang, Xuan | Qin, Zhangyi | Liu, Baogui | Zhang, Xinhou | Wang, Guoxiang
Due to a close contact with water column, submerged macrophytes are easily disturbed by environment change in freshwater ecosystems, especially at the seedling stage. In recent decades, freshwater ecosystems have been subject to severe cadmium (Cd) pollution, which can cause toxic effects on the growth of submerged macrophytes. Moreover, the temperature rise resulting from climate warming and water level decline may further aggravate such effect, especially in shallow lakes. Here, we investigated the independent and interaction effects of Cd exposure levels (0, 0.5, 1, and 2.5 mg L⁻¹) and temperature (15, 25, and 30 °C) on morphological and physiological traits of Myriophyllum aquaticum (Vell.) Verd. Seedlings generated from propagules and seeds. The temperature rise and Cd exposure generally resulted in a significant increase of Cd concentrations and antioxidant enzyme activities in leaves, as well as a decrease of chlorophyll a and b concentrations. The number and length of leaves generated from propagules always show a downward trend with the increase of Cd exposure, regardless of the temperature. Moreover, the lowest leaf number and length always occurred at high temperature (i.e. 30 °C) when the Cd exposure level increased to 1 and 2.5 mg L⁻¹. For the seedlings generated from seeds, the temperature rise caused an increase of leaf emergence rate under low Cd exposure levels, but resulted in a significant decrease with the Cd exposure level. This study indicates the negative effects of Cd exposure and temperature rise on submerged macrophytes at the seedling stage, and highlights that temperature rise would enhance Cd toxicity.
Show more [+] Less [-]Ambient temperature and genome-wide DNA methylation: A twin and family study in Australia Full text
2021
Xu, Rongbin | Li, Shuai | Li, Shanshan | Wong, Ee Ming | Southey, Melissa C. | Hopper, John L. | Abramson, Michael J. | Guo, Yuming
Little is known about the association between ambient temperature and DNA methylation, which is a potential biological process through which ambient temperature affects health. This study aimed to evaluate the association between ambient temperature and DNA methylation across human genome. We included 479 Australian women, including 132 twin pairs and 215 sisters of these twins. Blood-derived DNA methylation was measured using the HumanMethylation450 BeadChip array. Data on average ambient temperature during eight different exposure windows [lag0d (the blood draw day), lag0-7d (the current day and previous seven days prior to blood draw), lag0-14d, lag0-21d, lag0-28d, lag0-90d, lag0-180d, and lag0-365d)] was linked to each participant's home address. For each cytosine-guanine dinucleotide (CpG), we evaluated the association between its methylation level and temperature using generalized estimating equations (GEE), adjusting for important covariates. We used comb-p and DMRcate to identify differentially methylated regions (DMRs). We identified 31 CpGs at which blood DNA methylation were significantly associated with ambient temperature with false discovery rate [FDR] < 0.05. There were 82 significant DMRs identified by both comb-p (Sidak p-value < 0.01) and DMRcate (FDR < 0.01). Most of these CpGs and DMRs only showed association with temperature during one specific exposure window. These CpGs and DMRs were mapped to 85 genes. These related genes have been related to many human chronic diseases or phenotypes (e.g., diabetes, arthritis, breast cancer, depression, asthma, body height) in previous studies. The signals of short-term windows (lag0d and lag0-21d) showed enrichment in biological processes related to cell adhesion. In conclusion, short-, medium-, and long-term exposures to ambient temperature were all associated with blood DNA methylation, but the target genomic loci varied by exposure window. These differential methylation signals may serve as potential biomarkers to understand the health impacts of temperature.
Show more [+] Less [-]Acute toxicity of Bisphenol A (BPA) to tropical marine and estuarine species from different trophic groups Full text
2021
Naveira, Clarissa | Rodrigues, Nathália | Santos, Fernanda S. | Santos, Luciano N. | Neves, Raquel A.F.
BPA is chemical pollutant of very high concern due to its toxicity to the environment and risks for human health. Environmental concern consists in BPA entrance into aquatic ecosystems due to acute and chronic toxicity to invertebrates and vertebrates. This study aimed to determine acute BPA toxicity to tropical estuarine-marine species of four trophic levels and integrate BPA toxicity values using species sensitivity distribution (SSD) analysis. Our hypothesis is that BPA toxicity increases towards higher trophic levels. Microalga (Tetraselmis sp.), zooplanktonic grazer (Artemia salina), deposit-feeder invertebrate (Heleobia australis), and omnivorous fish (Poecilia vivipara) were chosen as experimental models. Tetraselmis sp. showed the highest BPA tolerance, without a concentration-dependent response. Species sensitivity have increased from A. salina (LC₅₀,₉₆ₕ = 107.2 mg L⁻¹), followed by H. australis (LC₅₀,₉₆ₕ = 11.53.5 mg L⁻¹), to P. vivipara (LC₅₀,₉₆ₕ = 3.5 mg L⁻¹). Despite the toxicity hierarchy towards trophic levels, which partially supported our hypothesis, SSD did not evidence a clear pattern among estuarine-marine trophic groups. Our study disclosed the sensitivity of not yet investigated species to BPA and, in an integrative way, highlighted BPA toxic effects at different trophic levels. Although estimated acute hazardous concentration (HC5 = 1.18 mg L⁻¹) for estuarine and marine species was higher than environmentally relevant concentrations, sublethal adverse effects induced by BPA exposure may lead to unbalances in population levels and consequently affect the ecological functioning of tropical coastal systems.
Show more [+] Less [-]Transcriptomics reveals the action mechanisms and cellular targets of citrate-coated silver nanoparticles in a ubiquitous aquatic fungus Full text
2021
Barros, Diana | Pradhan, Arunava | Pascoal, Cláudia | Cássio, Fernanda
Transcriptomics reveals the action mechanisms and cellular targets of citrate-coated silver nanoparticles in a ubiquitous aquatic fungus Full text
2021
Barros, Diana | Pradhan, Arunava | Pascoal, Cláudia | Cássio, Fernanda
Silver nanoparticles (AgNPs) are among the major groups of contaminants of emerging concern for aquatic ecosystems. The massive application of AgNPs relies on the antimicrobial properties of Ag, raising concerns about their potential risk to ecologically important freshwater microbes and the processes they drive. Moreover, it is still uncertain whether the effects of AgNPs are driven by the same mechanisms underlying those of Ag ions (Ag⁺). We employed transcriptomics to better understand AgNP toxicity and disentangle the role of Ag⁺ in the overall toxicity towards aquatic fungi. To that end, the worldwide-distributed aquatic fungus Articulospora tetracladia, that plays a central role in organic matter turnover in freshwaters, was selected and exposed for 3 days to citrate-coated AgNPs (∼20 nm) and Ag⁺ at concentrations inhibiting 20% of growth (EC₂₀). Responses revealed 258 up- and 162 down-regulated genes upon exposure to AgNPs and 448 up- and 84 down-regulated genes under exposure to Ag⁺. Different gene expression patterns were found after exposure to each silver form, suggesting distinct mechanisms of action. Gene ontology (GO) analyses showed that the major cellular targets likely affected by both silver forms were the biological membranes. GO-based biological processes indicated that AgNPs up-regulated the genes involved in transport, nucleobase metabolism and energy production, but down-regulated those associated with redox and carbohydrate metabolism. Ag⁺ up-regulated the genes involved in carbohydrate and steroid metabolism, whereas genes involved in localization and transport were down-regulated. Our results showed, for the first time, distinct profiles of gene expression in aquatic fungi exposed to AgNPs and Ag⁺, supporting different modes of toxicity of each silver form. Also, our results suggest that Ag⁺ had a negligible role in the toxicity induced by AgNPs. Finally, our study highlights the power of transcriptomics in portraying the stress induced by different silver forms in organisms.
Show more [+] Less [-]Transcriptomics reveals the action mechanisms and cellular targets of citrate-coated silver nanoparticles in a ubiquitous aquatic fungus Full text
2021
Barros, Diana | Pradhan, Arunava | Pascoal, Cláudia | Cássio, Fernanda
Silver nanoparticles (AgNPs) are among the major groups of contaminants of emerging concern for aquatic ecosystems. The massive application of AgNPs relies on the antimicrobial properties of Ag, raising concerns about their potential risk to ecologically important freshwater microbes and the processes they drive. Moreover, it is still uncertain whether the effects of AgNPs are driven by the same mechanisms underlying those of Ag ions (Ag+). We employed transcriptomics to better understand AgNP toxicity and disentangle the role of Ag+ in the overall toxicity towards aquatic fungi. To that end, the worldwide-distributed aquatic fungus Articulospora tetracladia, that plays a central role in organic matter turnover in freshwaters, was selected and exposed for 3 days to citrate-coated AgNPs (∼20 nm) and Ag+ at concentrations inhibiting 20% of growth (EC20). Responses revealed 258 up- and 162 down-regulated genes upon exposure to AgNPs and 448 up- and 84 down-regulated genes under exposure to Ag+. Different gene expression patterns were found after exposure to each silver form, suggesting distinct mechanisms of action. Gene ontology (GO) analyses showed that the major cellular targets likely affected by both silver forms were the biological membranes. GO-based biological processes indicated that AgNPs up-regulated the genes involved in transport, nucleobase metabolism and energy production, but down-regulated those associated with redox and carbohydrate metabolism. Ag+ up-regulated the genes involved in carbohydrate and steroid metabolism, whereas genes involved in localization and transport were down-regulated. Our results showed, for the first time, distinct profiles of gene expression in aquatic fungi exposed to AgNPs and Ag+, supporting different modes of toxicity of each silver form. Also, our results suggest that Ag+ had a negligible role in the toxicity induced by AgNPs. Finally, our study highlights the power of transcriptomics in portraying the stress induced by different silver forms in organisms. | Emergemix project (PTDC/BIA-BMA/30922/2017). D. Barros (SFRH/BD/80407/2011)
Show more [+] Less [-]Polybrominated diphenyl ethers in serum from residents living in a brominated flame retardant production area: Occurrence, influencing factors, and relationships with thyroid and liver function Full text
2021
Zhao, Xuezhen | Yang, Xiaodi | Du, Yinglin | Li, Renbo | Zhou, Tao | Wang, Yuwei | Chen, Tian | Wang, Dejun | Shi, Zhixiong
Polybrominated diphenyl ethers (PBDEs) have been used as flame retardants (FRs) in China for decades, even after they were identified as persistent organic pollutants. In this study, serum samples were collected from 172 adults without occupational exposure who were residents of a well-known FR production region (Laizhou Bay, north China), and PBDE congeners were measured to assess their occurrence, congener profile and influencing factors in serum. Moreover, the relationships between serum concentrations of PBDEs and thyroid/liver function indicators were analyzed to evaluate whether human exposure to PBDEs would lead to thyroid/liver injury. All 8 PBDE congeners were detected at higher frequencies and serum concentrations than those found in general populations. The median levels of ∑PBDEs, BDE-209 and ∑₃₋₇PBDEs (sum of tri-to hepta-BDEs) were 64.5, 56.9 and 7.2 ng/g lw (lipid weight), respectively, which indicated that deca-BDE was the primarily produced PBDE in Laizhou Bay and that the lower brominated BDEs were still ubiquitous in the environment. Gender was a primary influencing factor for some BDE congeners in serum; their levels in female serum samples were significantly lower than those in male serum samples. Serum PBDE levels showed a downward trend with increased body mass index (BMI), which might reflect the increasing serum lipid contents. Serum levels of some BDE congeners were significantly positively correlated with certain thyroid hormones and antibodies, including free triiodothyronine (fT3), total triiodothyronine (tT3), total thyroxine (tT4) and thyroid peroxidase antibody (TPO-Ab). Levels of some congeners were significantly negatively correlated with some types of serum lipid, including cholesterol (CHOL), low density lipoprotein (LDL) and total triglyceride (TG). Other than serum lipids, only two liver function indicators, total protein (TP) and direct bilirubin (DBIL), were significantly correlated with certain BDE congeners (BDE-100 and BDE-154). Our results provide new evidence on the thyroid-disrupting and hepatotoxic effects of PBDEs.
Show more [+] Less [-]Dichlorodiphenyltrichloroethane metabolites inhibit DNMT1 activity which confers methylation-specific modulation of the sex determination pathway Full text
2021
Hu, Junjie | Yang, Yan | Lv, Xiaomei | Lao, Zhilang | Yu, Lili
Dichlorodiphenyltrichloroethane (DDT) poses a significant health risk to humans which is associated with genomic DNA hypomethylation. However, the mechanism and biological consequences remain poorly understood. In vitro assays confirmed that the DDT metabolites 2,2-bis(p-chlorophenyl)-acetic acid (DDA) and 1-chloro-2,2-bis-(p-chlorophenyl)ethylene (DDMU), but not other DDT metabolites, significantly inhibited DNA methyltransferase 1 (DNMT1) activity, leading to genomic hypomethylation in cell culture assays. DNMT1 as a target for DNA hypomethylation induced by DDT metabolites was also confirmed using cell cultures in which DNMT1 was silenced or highly expressed. DDA and DDMU can modify methylation markers in the promoter regions of sexual development-related genes, and change the expression of Sox9 and Oct4 in embryonic stem cells. Molecular docking indicated that DDA and DDMU bound to DNMT1 with high binding affinity. Molecular dynamic simulation revealed that DDA and DDMU acted as allosteric modulators that reshaped the conformation of the catalytic domain of DNMT1. These findings provide a new insight into DDT-induced abnormalities in sexual development and demonstrate that selective binding to DNMT1 by DDA and DDMU can interfere with human DNMT1 activity and regulate the expression of the Sox9 and Oct4 genes.
Show more [+] Less [-]Targeting the right parameters in PAH remediation studies Full text
2021
Davin, Marie | Colinet, Gilles | Fauconnier, Marie-Laure
Targeting the right parameters in PAH remediation studies Full text
2021
Davin, Marie | Colinet, Gilles | Fauconnier, Marie-Laure
Contaminated land burdens the economy of many countries and must be dealt with.Researchers have published thousands of documents studying and developing soil and sediment remediation treatments. Amongst the targeted pollutants are the polycyclic aromatic hydrocarbons (PAHs), described as a class of persistent organic compounds, potentially harmful to ecosystems and living organisms.The present paper reviews and discusses three scientific trends that are leading current PAH-contaminated soil/sediment remediation studies and management.First, the choice of compounds that are being studied and targeted in the scientific literature is discussed, and we suggest that the classical 16 US-EPA PAH compounds might no longer be sufficient to meet current environmental challenges.Second, we discuss the choice of experimental material in remediation studies. Using bibliometric measures, we show the lack of PAH remediation trials based on co-contaminated or aged-contaminated material.Finally, the systematic use of the recently validated bioavailability measurement protocol (ISO/TS 16751) in remediation trials is discussed, and we suggest it should be implemented as a tool to improve remediation processes and management strategies.
Show more [+] Less [-]Targeting the right parameters in PAH remediation studies Full text
2021
Davin, Marie | Colinet, Gilles | Fauconnier, Marie-Laure
peer reviewed | Contaminated land burdens the economy of many countries and must be dealt with. Researchers have published thousands of documents studying and developing soil and sediment remediation treatments. Amongst the targeted pollutants are the polycyclic aromatic hydrocarbons (PAHs), described as a class of persistent organic compounds, potentially harmful to ecosystems and living organisms. The present paper reviews and discusses three scientific trends that are leading current PAH-contaminated soil/sediment remediation studies and management. First, the choice of compounds that are being studied and targeted in the scientific literature is discussed, and we suggest that the classical 16 US-EPA PAH compounds might no longer be sufficient to meet current environmental challenges. Second, we discuss the choice of experimental material in remediation studies. Using bibliometric measures, we show the lack of PAH remediation trials based on co-contaminated or aged-contaminated material. Finally, the systematic use of the recently validated bioavailability measurement protocol (ISO/TS 16751) in remediation trials is discussed, and we suggest it should be implemented as a tool to improve remediation processes and management strategies.
Show more [+] Less [-]An integrated method for source apportionment of heavy metal(loid)s in agricultural soils and model uncertainty analysis Full text
2021
Wang, Yuntao | Guo, Guanghui | Zhang, Degang | Lei, Mei
Elevated concentrations of heavy metals in agricultural soils threatening ecological security and the quality of agricultural products, and apportion their sources accurately is still a challenging task. Multivariate statistical analysis, GIS mapping, Pb isotopic ratio analysis (IRA), and positive matrix factorization (PMF) were integrated to apportion the potential sources of heavy metal(loid)s of orchard soil in Karst-regions. Study region soils were moderately contaminated by Cd. Obvious enrichment and moderate contamination level of Cd were found in study region surface soils, followed by As, Zn, and Pb. Correlation analysis (CA) and principal component analysis (PCA) indicated Ba, Co, Cr, Ni, V were mainly from natural sources, while As, Cd, Cu, Pb, Zn were derived from two kinds of anthropogenic sources. Based on Pb isotope composition, atmospheric deposition and livestock manure were the main sources of soil Pb accumulation. Further source identification and quantification results with PMF model and GIS mapping revealed that soil parent materials (46.44%) accounted for largest contribution to the soil heavy metal(loid)s, followed by fertilizer application (31.37%) and mixed source (industrial activity and manure, 22.19%). Uncertainty analysis indicated that the three-factors solution of PMF model was an optimal explanation and the heavy metal(loid) with lower percentage contributions had higher uncertainty. This study results can help to illustrate the sources of heavy metals more accurately in orchard agricultural soils with a clear expected future for further applications.
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