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Plastic burdens in northern fulmars from Svalbard: Looking back 25 years Full text
2022
Collard, France | Bangjord, Georg | Herzke, Dorte | Gabrielsen, Geir W
peer reviewed | The northern fulmar Fulmarus glacialis ingests a larger number of (micro)plastics than many other seabirds due to its feeding habits and gut morphology. Since 2002, they are bioindicators of marine plastics in the North Sea region, and data are needed to extend the programme to other parts of their distribution areas, such as the Arctic. In this study, we provide data on ingested plastics by fulmars collected in 1997 in Kongsfjorden, Svalbard. An extraction protocol with KOH was used and for half of the birds, the gizzard and the proventricular contents were analysed separately. Ninety-one percent of the birds had ingested at least one piece of plastic with an average of 10.3 (±11.9 SD) pieces. The gizzards contained significantly more plastics than the proventriculus. Hard fragments and polyethylene were the most common characteristics. Twelve percent of the birds exceeded the EcoQO value of 0.1 g.
Show more [+] Less [-]Distribution of pesticides and some of their transformation products in a small lentic waterbody: Fish, water, and sediment contamination in an agricultural watershed Full text
2022
Slaby, Sylvain | Le Cor, François | Dufour, Vincent | Auger, Lucile | Pasquini, Laure | Cardoso, Olivier | Curtet, Laurence | Baudoin, Jean-Marc | Wiest, Laure | Vulliet, Emmanuelle | Feidt, Cyril | Dauchy, Xavier | Banas, Damien | Unité de Recherches Animal et Fonctionnalités des Produits Animaux (URAFPA) ; Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Laboratoire d'hydrologie de Nancy (LHN) ; Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES) | Zone Atelier du Bassin de la Moselle (LTSER-ZAM) ; Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-LTSER Réseau des Zones Ateliers (RZA) ; Institut Ecologie et Environnement - CNRS Ecologie et Environnement (INEE-CNRS) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Ecologie et Environnement - CNRS Ecologie et Environnement (INEE-CNRS) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) | Office français de la biodiversité (OFB) | ISA-TRACES - Technologie et Recherche en Analyse Chimique pour l'Environnement et la Santé ; Institut des Sciences Analytiques (ISA) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)
Distribution of pesticides and some of their transformation products in a small lentic waterbody: Fish, water, and sediment contamination in an agricultural watershed Full text
2022
Slaby, Sylvain | Le Cor, François | Dufour, Vincent | Auger, Lucile | Pasquini, Laure | Cardoso, Olivier | Curtet, Laurence | Baudoin, Jean-Marc | Wiest, Laure | Vulliet, Emmanuelle | Feidt, Cyril | Dauchy, Xavier | Banas, Damien | Unité de Recherches Animal et Fonctionnalités des Produits Animaux (URAFPA) ; Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Laboratoire d'hydrologie de Nancy (LHN) ; Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES) | Zone Atelier du Bassin de la Moselle (LTSER-ZAM) ; Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-LTSER Réseau des Zones Ateliers (RZA) ; Institut Ecologie et Environnement - CNRS Ecologie et Environnement (INEE-CNRS) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Ecologie et Environnement - CNRS Ecologie et Environnement (INEE-CNRS) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) | Office français de la biodiversité (OFB) | ISA-TRACES - Technologie et Recherche en Analyse Chimique pour l'Environnement et la Santé ; Institut des Sciences Analytiques (ISA) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)
International audience | More than 20 years after the Water Framework Directive was adopted, there are still major gaps in the sanitary status of small rivers and waterbodies at the head of basins. These small streams supply water to a large number of wetlands that support a rich biodiversity. Many of these waterbodies are fishponds whose production is destined for human consumption or for the restocking of other aquatic environments. However, these ecosystems are exposed to contaminants, including pesticides and their transformation products. This work aims to provide information on the distribution, diversity, and concentrations of agricultural contaminants in abiotic and biotic compartments from a fishpond located at the head of watersheds. A total of 20 pesticides and 20 transformation products were analyzed by HPLC-ESI-MS/MS in water and sediment sampled monthly throughout a fish production cycle, and in three fish species at the beginning and end of the cycle.The highest mean concentrations were found for metazachlor-OXA (519.48 +/- 56.52 ng.L-1) in water and benzamide (4.23 +/- 0.17 ng g(-1) dry wt.) in sediment. Up to 20 contaminants were detected per water sample and 26 per sediment sample. The transformation products of atrazine (banned in Europe since 2003 but still widely used in other parts of the world), flufenacet, imidacloprid (banned in France since 2018), metazachlor, and metolachlor were more concentrated than their parent compounds. Fewer contaminants were detected in fish and principally prosulfocarb accumulated in organisms during the cycle.Our work brings innovative data on the contamination of small waterbodies located at the head of a basin. The transformation products with the highest frequency of occurrence and concentrations should be prioritized for further environmental monitoring studies, and specific toxicity thresholds should be defined. Few contaminants were found in fish, but the results challenge the widely use of prosulfocarb.
Show more [+] Less [-]Distribution of pesticides and some of their transformation products in a small lentic waterbody: Fish, water, and sediment contamination in an agricultural watershed Full text
2022
Slaby, Sylvain | Le Cor, François | Dufour, Vincent | Auger, Lucile | Pasquini, Laure | Cardoso, Olivier | Curtet, Laurence | Baudoin, Jean-Marc | Wiest, Laure | Vulliet, Emmanuelle | Feidt, Cyril | Dauchy, Xavier | Banas, Damien
More than 20 years after the Water Framework Directive was adopted, there are still major gaps in the sanitary status of small rivers and waterbodies at the head of basins. These small streams supply water to a large number of wetlands that support a rich biodiversity. Many of these waterbodies are fishponds whose production is destined for human consumption or for the restocking of other aquatic environments. However, these ecosystems are exposed to contaminants, including pesticides and their transformation products. This work aims to provide information on the distribution, diversity, and concentrations of agricultural contaminants in abiotic and biotic compartments from a fishpond located at the head of watersheds. A total of 20 pesticides and 20 transformation products were analyzed by HPLC-ESI-MS/MS in water and sediment sampled monthly throughout a fish production cycle, and in three fish species at the beginning and end of the cycle.The highest mean concentrations were found for metazachlor-OXA (519.48 ± 56.52 ng.L⁻¹) in water and benzamide (4.23 ± 0.17 ng g⁻¹ dry wt.) in sediment. Up to 20 contaminants were detected per water sample and 26 per sediment sample. The transformation products of atrazine (banned in Europe since 2003 but still widely used in other parts of the world), flufenacet, imidacloprid (banned in France since 2018), metazachlor, and metolachlor were more concentrated than their parent compounds. Fewer contaminants were detected in fish and principally prosulfocarb accumulated in organisms during the cycle.Our work brings innovative data on the contamination of small waterbodies located at the head of a basin. The transformation products with the highest frequency of occurrence and concentrations should be prioritized for further environmental monitoring studies, and specific toxicity thresholds should be defined. Few contaminants were found in fish, but the results challenge the widely use of prosulfocarb.
Show more [+] Less [-]Study of microbial communities and environmental parameters of seawater collected from three Tunisian fishing harbors in Kerkennah Islands: Statistical analysis of the temporal and spatial dynamics Full text
2022
Cheffi, Meriam | Belmabrouk, Sabrine | Karray, Fatma | Hentati, Dorra | Bru-Adan, Valérie | Godon, Jean-Jacques | Sayadi, Sami | Chamkha, Mohamed | Université de Sfax - University of Sfax | Centre de Biotechnologie de Sfax (CBS) | Laboratoire de Biotechnologie de l'Environnement [Narbonne] (LBE) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Qatar University | Tunisian Ministry of Higher Education and Scientific Research | Hubert Curien Program (CMCU 15G0808) supported by the French Ministry of Foreign Affairs
International audience | Surface seawater, collected from three fishing harbors during different seasons of the years 2015, 2016 and 2017, were assessed for physico-chemical analyses. Results showed that seawater was mainly polluted by hydrocarbons and some heavy metals. Microbial communities' composition and abundance in the studied harbors were per-formed using molecular approaches. SSCP analysis indicated the presence of Bacteria, Archaea and Eucarya, with dominance of the bacterial domain. Illumina Miseq analysis revealed that the majority of the sequences were affiliated with Bacteria whereas Archaea were detected at low relative abundance. The bacterial community, dominated by Proteobacteria, Bacteroidetes, Planctomycetes, Cyanobacteria, Firmicutes, Actinobacteria and Chloro-flexi phyla, are known to be involved in a variety of biodegradation/biotransformation processes including hydrocarbons degradation and heavy metals resistance. The main objectives of this study are to assess, for the first time, the organic/inorganic pollution in surface seawater of Kerkennah Islands harbors, and to explore the potential of next generation marine microbiome monitoring to achieve the planning coastal managing strategies worldwide.
Show more [+] Less [-]Drivers of litter ingestion by sea turtles: three decades of empirical data collected in Atlantic Europe and the Mediterranean Full text
2022
Darmon, Gaëlle | Schulz, Marcus | Matiddi, Marco | Loza, Ana Liria | Tomás, Jesús | Camedda, Andrea | Chaieb, Olfa | El Hili, Hedia | Bradai, Mohamed | Bray, Laura | Claro, Françoise | Dellinger, Thomas | Dell'Amico, Florence | de Lucia, Giuseppe | Duncan, Emily | Gambaiani, Delphine | Godley, Brendan | Kaberi, Helen | Kaska, Yakup | Martin, Jessica | Moreira, Cláudia | Ostiategui, Patricia | Pham, Christopher | Piermarini, Raffaella | Revuelta, Ohiana | Rodríguez, Yasmina | Silvestri, Cecilia | Snape, Robin | Sozbilen, Dogăn | Tsangaris, Catherine | Vale, Maria | Vandeperre, Frederic | Miaud, Claude | Centre d’Ecologie Fonctionnelle et Evolutive (CEFE) ; Université Paul-Valéry - Montpellier 3 (UPVM)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Occitanie])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM) | Patrimoine naturel (PatriNat) ; Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Centre National de la Recherche Scientifique (CNRS)-OFB Direction surveillance, évaluation,données (OFB - DSUED) ; Office français de la biodiversité (OFB)-Office français de la biodiversité (OFB)
International audience | Sea turtles are considered as bio-indicators for monitoring the efficiency of restoration measures to reduce marine litter impacts on health. However, the lack of extended and standardised empirical data has prevented the accurate analysis of the factors influencing litter ingestion and the relationships with individual health. Historic data collected from 1988 and standard data collected from 2016 were harmonised to enable such analyses on necropsied loggerhead turtles (Caretta caretta) in eight Mediterranean and North-East Atlantic countries. Litter was found in 69.24 % of the 1121 individuals, mostly single-use and fishing-related plastics. Spatial location, sex and life history stage explained a minor part of litter ingestion. While no relationships with health could be detected, indicating that all individuals can be integrated as bio-indicators, the mechanistic models published in literature suggest that the high proportion of plastics in the digestive contents (38.77 % per individual) could have long-term repercussions on population dynamics.
Show more [+] Less [-]13C assimilation as well as functional gene abundance and expression elucidate the biodegradation of glyphosate in a field experiment Full text
2022
Wirsching, Johannes | Wimmer, Benedikt | Ditterich, Franziska | Schlögl, Johanna | Martin-Laurent, Fabrice | Huhn,, Carolin | Haderlein, Stefan, B. | Kandeler, Ellen | Poll, Christian | University of Stuttgart, Germany | Eberhard Karls University of Tübingen, Department of Prehistory and Quaternary Ecology, Schloss Hohentübingen, 72070 Tübingen, Germany ; Eberhard Karls Universität Tübingen = University of Tübingen | Agroécologie [Dijon] ; Université de Bourgogne (UB)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Dijon ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | This study was financially supported by the German ResearchFoundation (DFG) under the Collaborative Research Center 1253CAMPOS (DFG grant SFB 1253/1 2017).
13C assimilation as well as functional gene abundance and expression elucidate the biodegradation of glyphosate in a field experiment Full text
2022
Wirsching, Johannes | Wimmer, Benedikt | Ditterich, Franziska | Schlögl, Johanna | Martin-Laurent, Fabrice | Huhn,, Carolin | Haderlein, Stefan, B. | Kandeler, Ellen | Poll, Christian | University of Stuttgart, Germany | Eberhard Karls University of Tübingen, Department of Prehistory and Quaternary Ecology, Schloss Hohentübingen, 72070 Tübingen, Germany ; Eberhard Karls Universität Tübingen = University of Tübingen | Agroécologie [Dijon] ; Université de Bourgogne (UB)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Dijon ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | This study was financially supported by the German ResearchFoundation (DFG) under the Collaborative Research Center 1253CAMPOS (DFG grant SFB 1253/1 2017).
International audience | Glyphosate (N-phosphonomethylglycine; GLP) and its main metabolite AMPA (aminomethylphosphonic acid), are frequently detected in relatively high concentrations in European agricultural topsoils. Glyphosate has a high sorption affinity, yet it can be detected occasionally in groundwater. We hypothesized that shrinkage cracks occurring after dry periods could facilitate GLP transport to greater depths where subsoil conditions slow further microbial degradation. To test this hypothesis, we simulated a heavy rainfall event (HRE) on a clay-rich arable soil. We applied 2.1 kg ha−1 of 100% 13C3, 15N-labeled GLP one day before the simulated rainfall event. Microbial degradation of translocated GLP over a 21-day period was assessed by quantifying 13C incorporation into phospholipid fatty acids. Microbial degradation potential and activity were determined by quantifying the abundance and expression of functional genes involved in the two known degradation pathways of GLP; to AMPA (goxA) or sarcosine (sarc). We confirmed that goxA transcripts were elevated in the range of 4.23 x 105 copy numbers g−1 soil only one day after application. The increase in AMPA associated with a rise in goxA transcripts and goxA-harboring microorganisms indicated that the degradation pathway to AMPA dominated. Based on 13C-enrichment 3 h after the HRE, fungi appeared to initiate glyphosate degradation. At later time points, Gram+-bacteria proved to be the main degraders due to their higher 13C-incorporation. Once GLP reached the subsoil, degradation continued but more slowly. By comparing GLP distribution and its microbial degradation in macropores and in the bulk soil, we demonstrated different time- and depth-dependent GLP degradation dynamics in macropores. This indicates the need for field studies in which soil properties relevant to GLP degradation are related to limiting environmental conditions, providing a realistic assessment of GLP fate in soils.
Show more [+] Less [-]13C assimilation as well as functional gene abundance and expression elucidate the biodegradation of glyphosate in a field experiment Full text
2022
Wirsching, Johannes | Wimmer, Benedikt | Ditterich, Franziska | Schlögl, Johanna | Martin-Laurent, Fabrice | Huhn, Carolin | Haderlein, Stefan | Kandeler, Ellen | Poll, Christian
Glyphosate (N-phosphonomethylglycine; GLP) and its main metabolite AMPA (aminomethylphosphonic acid), are frequently detected in relatively high concentrations in European agricultural topsoils. Glyphosate has a high sorption affinity, yet it can be detected occasionally in groundwater. We hypothesized that shrinkage cracks occurring after dry periods could facilitate GLP transport to greater depths where subsoil conditions slow further microbial degradation. To test this hypothesis, we simulated a heavy rainfall event (HRE) on a clay-rich arable soil. We applied 2.1 kg ha⁻¹ of 100% ¹³C₃, ¹⁵N-labeled GLP one day before the simulated rainfall event. Microbial degradation of translocated GLP over a 21-day period was assessed by quantifying ¹³C incorporation into phospholipid fatty acids. Microbial degradation potential and activity were determined by quantifying the abundance and expression of functional genes involved in the two known degradation pathways of GLP; to AMPA (goxA) or sarcosine (sarc). We confirmed that goxA transcripts were elevated in the range of 4.23 x 10⁵ copy numbers g⁻¹ soil only one day after application. The increase in AMPA associated with a rise in goxA transcripts and goxA-harboring microorganisms indicated that the degradation pathway to AMPA dominated. Based on ¹³C-enrichment 3 h after the HRE, fungi appeared to initiate glyphosate degradation. At later time points, Gram⁺-bacteria proved to be the main degraders due to their higher ¹³C-incorporation. Once GLP reached the subsoil, degradation continued but more slowly. By comparing GLP distribution and its microbial degradation in macropores and in the bulk soil, we demonstrated different time- and depth-dependent GLP degradation dynamics in macropores. This indicates the need for field studies in which soil properties relevant to GLP degradation are related to limiting environmental conditions, providing a realistic assessment of GLP fate in soils.
Show more [+] Less [-]Spatio-temporal geostatistical modelling of sulphate concentration in the area of the Reocín Mine (Spain) as an indicator of water quality Full text
2022
Barral Ramón, Noemí | Maleki, Mohammad | Madani, Nasser | Cánovas, Manuel | Husillos Rodríguez, Raúl | Castillo López, Elena | Universidad de Cantabria
Water stored in open-pit lakes can be a water resource when the mine is closed. This study aimed to develop a reliable model to evaluate the water quality, based on the sulphate concentration, in the Reocín Mine area (Spain) by using geostatistical algo rithms. To this end, water samples were taken from the beginning of the flooding period in November 2004 until August 2020. The model showed that the sulphate concentration was highest between February 2009 and February 2012 and decreased as the flooding process progressed. The area with the highest concentration (2000 mg L-1) was the central part of the study area, where the mine is located, while in the northeast and southwest, the values from the beginning of the flooding period were lower, below 500 mg L-1. In the last obtained model, the values decreased considerably to 1300 mg L-1 in the central area and below 250 mg L-1 in the northeast and southwest areas. The modelling conducted to assess the water quality in the area of influence of the mine determined that the flooding process has little influence on the water in the rivers and streams in the area, since the sulphate concentration measured in the adjacent rivers and streams was less than 250 mg L-1, indicating that anomalous concentrations were only found in the open-pit area. It was shown that geostatistical algorithms are useful tools that can be used to model the intensity and extension of water pollutants in space over time.
Show more [+] Less [-]Fate and transport of tetracycline and ciprofloxacin and impact on nitrate reduction activity in coastal sediments from the Seine Estuary, France Full text
2022
Chen, Chen | Laverman, Anniet M. | Roose-Amsaleg, Céline | Regimbeau, Garance | Hanna, Khalil | Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO) ; Université de Rennes (UR)-Institut Ecologie et Environnement (INEE) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR) ; Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS) | Institut des Sciences Chimiques de Rennes (ISCR) ; Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes) ; Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS) | Institut Universitaire de France (IUF); MITI-CNRS (Metallo-Mix)
International audience | Fluoroquinolones and tetracyclines are frequently detected antibiotics in aquatic sediments. In this study, the transport of ciprofloxacin (CIP) and tetracycline (TET) was investigated in sediments from the Seine Estuary (France), under nitrate reducing conditions. Dynamic flow experiments showed that although TET and CIP strongly interacted with the sediment components through adsorption and (bio)-chemical transformation, they kept their antimicrobial activities. Less nitrate reduction was observed during the first period of breakthrough, while TET and CIP were absent in the column effluent. Batch experiments with freeze-dried vs fresh sediments showed that adsorption and abiotic degradation are the major removal processes, while microbe-driven transformation is of less importance. Whereas TET is to a large extent chemically transformed and little adsorbed in the sediment, CIP was less transformed and more adsorbed, most likely due to the great reactivity of TET with redox-active mineral surfaces. Our findings show the strong capacity of natural sediment to retain and transform antibiotics, while still maintaining their antimicrobial activity or inhibitory effect of nitrate reducing activity.
Show more [+] Less [-]Do DOM optical parameters improve the prediction of copper availability in vineyard soils? Full text
2022
Ouédraogo, Frédéric | Cornu, Jean-Yves | Janot, Noémie | Nguyen, Christophe | Sourzac, Mahaut | Parlanti, Edith | Denaix, Laurence | Interactions Sol Plante Atmosphère (UMR ISPA) ; Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; Observatoire aquitain des sciences de l'univers (OASU) ; Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
Do DOM optical parameters improve the prediction of copper availability in vineyard soils? Full text
2022
Ouédraogo, Frédéric | Cornu, Jean-Yves | Janot, Noémie | Nguyen, Christophe | Sourzac, Mahaut | Parlanti, Edith | Denaix, Laurence | Interactions Sol Plante Atmosphère (UMR ISPA) ; Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; Observatoire aquitain des sciences de l'univers (OASU) ; Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
International audience | Accumulation of copper (Cu) in soils due to the application of fungicides may be toxic for organisms and hence affect winegrowing sustainability. Soil parameters such as pH and dissolved organic matter (DOM) are known to affect the availability of Cu. In this study, we investigated the contribution of chromophoric and fluorescent DOM properties to the prediction of Cu availability in 18 organic vineyard soils in the Bordeaux winegrowing area (France). The DOM parameters, assessed through absorbance and fluorescence analyses, and proxies for Cu availability (total soluble Cu and free ionic Cu2+) were measured in 0.01 M KCl extracts. Total soluble Cu (CuKCl) varied 23-fold while free ionic Cu2+ varied by a factor of 4600 among the soils. DOC concentrations were similar among the soils, but the samples differed in the quality of DOM as assessed by optical spectroscopy. Multilinear regression models with and without DOM quality parameters were investigated to predict Cu availability. The best model for CuKCl successfully explained 83% of variance and included pH, CuT, and two DOM fluorescence quality indices, the FI fluorescence index, which distinguishes between microbial and higher plant origins, and the HIX humification index. For the prediction of Cu2+, pH alone explained 88% of variance and adding DOM parameters did not improve modelling. The two Cu availability proxies were related to pH. This study confirms the prominent role of pH in Cu availability and underlines the importance of DOM quality to better predict Cu solubility
Show more [+] Less [-]Do DOM optical parameters improve the prediction of copper availability in vineyard soils? Full text
2022
Ouédraogo, Frédéric | Cornu, Jean-Yves | Janot, Noémie | Nguyen, Christophe | Sourzac, Mahaut | Parlanti, Edith | Denaix, Laurence
Accumulation of copper (Cu) in soils due to the application of fungicides may be toxic for organisms and hence affect winegrowing sustainability. Soil parameters such as pH and dissolved organic matter (DOM) are known to affect the availability of Cu. In this study, we investigated the contribution of chromophoric and fluorescent DOM properties to the prediction of Cu availability in 18 organic vineyard soils in the Bordeaux winegrowing area (France). The DOM parameters, assessed through absorbance and fluorescence analyses, and proxies for Cu availability (total soluble Cu and free ionic Cu²⁺) were measured in 0.01 M KCl extracts. Total soluble Cu (CuKCₗ) varied 23-fold while free ionic Cu²⁺ varied by a factor of 4600 among the soils. DOC concentrations were similar among the soils, but the samples differed in the quality of DOM as assessed by optical spectroscopy. Multilinear regression models with and without DOM quality parameters were investigated to predict Cu availability. The best model for CuKCₗ successfully explained 83% of variance and included pH, CuT, and two DOM fluorescence quality indices, the FI fluorescence index, which distinguishes between microbial and higher plant origins, and the HIX humification index. For the prediction of Cu²⁺, pH alone explained 88% of variance and adding DOM parameters did not improve modelling. The two Cu availability proxies were related to pH. This study confirms the prominent role of pH in Cu availability and underlines the importance of DOM quality to better predict Cu solubility.
Show more [+] Less [-]Ionomics and metabolomics analysis reveal the molecular mechanism of metal tolerance of Pteris vittata L. dominating in a mining site in Thai Nguyen province, Vietnam Full text
2022
Nguyen, Ngoc-Lien | Bui, Van-Hoi | Pham, Hoang-Nam | To, Hien-Minh | Dijoux-Franca, M.-G. | Vu, Cam-Tu | Nguyen, Kieu-Oanh Thi | Vietnam Academy of Science and Technology (VAST) | Laboratoire d'Ecologie Microbienne - UMR 5557 (LEM) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-Ecole Nationale Vétérinaire de Lyon (ENVL)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
International audience | This study aims to find the interaction between ionome and metabolome profiles of Pteris vittata L., an arsenic hyperaccumulator plant, to reveal its metal tolerance mechanism. Therefore, at the Pb-Zn mining sites located in Thai Nguyen province, Vietnam, where these species dominate, soil and plant samples were collected. Their multi-element compositions were analyzed using inductively coupled plasma mass spectrometry (ICP-MS) and thus referred to as the "ionomics" approach. In parallel, the widely targeted metabolomics profiles of these plant samples were performed using liquid chromatography-tandem mass spectrometry (UPLC-QqQ-MS). Nineteen elements, including both metals and nonmetals, were detected and quantified in both tissues of thirty-five plant individuals. A comparison of these elements' levels in two tissues showed that above-ground parts accumulated more As and inorganic P, whereas Zn, Pb, and Sb were raised mostly in the under-ground samples. The partial least squares regression (PLSR) model predicting the level of each element by the whole metabolome indicated that the enhancement of flavonoids content plays an essential contribution in adaptation with the higher levels of Pb, Ag, and Ni accumulated in the aerial part, and Mn, Pb in subterranean part. Moreover, the models also highlighted the effect of Mn and Pb on the metabolic induction of adenosine derivatives in subterranean parts. At the same time, the model presented the most contribution of As to the metabolisms of the amino acids of this tissue. On those accounts, the developed integration approach linking the ionomics and metabolomics data of P. vittata improved the understanding of the molecular mechanism of hyperaccumulation characteristics and provided markers that could be targeted in future investigations.
Show more [+] Less [-]Metabolic, cellular and defense responses to single and co-exposure to carbamazepine and methylmercury in Dreissena polymorpha Full text
2022
Baratange, Clément | Paris-Palacios, Séverine | Bonnard, Isabelle | Delahaut, Laurence | Dominique, Grandjean | Wortham, Laurence | Sayen, Stéphanie | Gallorini, Andrea | Michel, Jean | Renault, D | Breider, Florian | Loizeau, Jean-Luc | Cosio, Claudia
International audience | Carbamazepine (CBZ) and Hg are widespread and persistent micropollutants in aquatic environments. Both pollutants are known to trigger similar toxicity mechanisms, e.g. reactive oxygen species (ROS) production. Here, their effects were assessed in the zebra mussel Dreissena polymorpha, frequently used as a freshwater model in ecotoxicology and biomonitoring. Single and co-exposures to CBZ (3.9 µg•L-1) and MeHg (280 ng•L-1) were performed for 1 and 7 days. Metabolomics analyses evidenced that the co-exposure was the most disturbing after 7 days, reducing the amount of 25 metabolites involved in protein synthesis, energy metabolism, antioxidant response and osmoregulation, and significantly altering cells and organelles' structure supporting a reduction of functions of gills and digestive glands. CBZ alone after 7 days decreased the amount of α-aminobutyric acid and had a moderate effect on the structure of mitochondria in digestive glands. MeHg alone had no effect on mussels' metabolome, but caused a significant alteration of cells and organelles' structure in gills and digestive glands. Single exposures and the co-exposure increased antioxidant responses vs control in gills and digestive glands, without resulting in lipid peroxidation, suggesting an increased ROS production caused by both pollutants. Data globally supported that a higher number of hyperactive cells compensated cellular alterations in the digestive gland of mussels exposed to CBZ or MeHg alone, while CBZ+MeHg co-exposure overwhelmed this compensation after 7 days. Those effects were unpredictable based on cellular responses to CBZ and MeHg alone, highlighting the need to consider molecular toxicity pathways for a better anticipation of effects of pollutants in biota in complex environmental conditions.
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