Bacillus subtilis YB1 is a strain that can efficiently transform nicosulfuron. In order to study its remediation ability and effects on other microorganisms in the soil, indoor biological remediation experiments and rhizosphere microbial diversity analysis were performed. B. subtilis YB1 granules were prepared and applied to the nicosulfuron contaminated soil. The concentration of nicosulfuron was detected by ultra-performance liquid chromatography-mass spectrometry (UPLC-MS) and changes in the physiological indicators of wheat were measured. At the same time, the changes in the rhizosphere soil microbial diversity were determined by 16S RNA sequencing. Results showed that the YB1 granules made a contribution to the transformation of nicosulfuron (0.05 mg kg⁻¹) in the soil within 55 days. The physiological indicators of wheat also showed consistent result about nicosulfuron transformation. Rhizosphere soil microbial diversity results indicated the relative abundance of Firmicutes decreased (3.0%–0.35%) and Acidobacteria first decreased (25.82%–22.38%) and then increased (22.3%–26.1%) with nicosulfuron added (N group). The relative abundance of Acidobacteria first decreased (25.8%–15.3%) and then increased (15.3%–21.7%) while Proteobacteria increased (26.5%–38.08%). At the same time, Firmicutes first increased (2.6%–12.3%) and then decreased to original level (12.3%–0.7%) in the N group with YB1 granules (NYB1 group). Members of the genus Bacillus initially increased and then decreased to the original level as the Control group, therefore, they did not become dominant in the rhizosphere soil. Alpha diversity analyses showed no obvious differences in species diversity among the N, NYB1 and Control groups. So YB1 did not have obvious influence on the rhizosphere microbial community structure during nicosulfuron transformation, which only had some effect on species abundance. This study revealed the successful indoor bioremediation of nicosulfuron in the soil, providing a potential strategy for solving the problem of nicosulfuron contamination.

In the past two decades, more and more attentions have been paid to soil-derived greenhouse gases (GHGs) including carbon dioxide (CO₂), methane (CH₄) and nitrous oxide (N₂O) because there are signs that they have rising negative impacts on the sustainability of the earth surface system. Farmlands, particularly paddy soils, have been regarded as the most important emitter of GHGs (nearly 17%) due to a large influx of fertilization and the abundance in animals, plants and microorganisms. Geobacter, as an electroactive microorganism widely occurred in soil, has been well studied on electron transport mechanisms and the direct interspecies electron transfer. These studies on Geobacter illustrate that it has the ability to be involved in the pathways of soil GHG emissions through redox reactions under anaerobic conditions. In this review, production mechanisms of soil-derived GHGs and the amount of these GHGs produced had been first summarized. The cycling process of CH₄ and N₂O was described from the view of microorganisms and discussed the co-culture relationships between Geobacter and other microorganisms. Furthermore, the role of Geobacter in the production of soil-derived GHGs is defined by biogeochemical cycling. The complete view on the effect of Geobacter on the emission of soil-derived GHGs has been shed light on, and appeals further investigation.

Although macrophytes are known to play vital roles in aquatic ecosystems, most quantitative aquatic toxicity data focus on fishes, water fleas, or algae, with limited ecotoxicity data published on macrophytes. Salvinia natans is a fast-growing plant commonly found in freshwater habitats. In this study, we verified a suitable disinfectant for preventing foreign contamination and formulated a culture medium for ensuring high productivity of S. natans. Finally, we established methodology for S. natans to be used in ecotoxicity testing of heavy metals and pesticides. As global regulations are being developed to harmonize guidelines and laboratory test species, S. natans is emerging as a potential candidate. The toxicity data publicly available for S. natans are very limited; hence, this study reports an advantageous culturing technique to optimize healthy growth of this species in the laboratory and presents optimal toxicity results, achieved by modifying the currently available test guidelines for Lemna. Our findings expand the currently limited range of test species for aquatic toxicity assays. We conclude that S. natans could serve as a valuable test species for aquatic toxicity assays.

The emission of mercury (Hg) from cropland soil greatly affects the global Hg cycle. Combinations of different crop cultivars and planting densities will result in different light transmittance under canopies, which directly affects the solar and heat radiation flux received by the soil surface below crops. In turn, this might lead to differences in the soil–air total gaseous mercury (TGM) exchange under different cropping patterns. However, soil–air TGM exchange fluxes in croplands under differing canopies have been poorly investigated. Here, a one-year observation of TGM exchange flux was conducted for cropland soils covering five different crop cultivars and three planting densities in North China Plain using the dynamic flux chamber method. The results showed that light transmittance under the canopies was the key control on soil–air TGM exchange fluxes. High light transmittance can enhance soil TGM emission rates and increase the magnitude of diurnal variations in soil–air TGM exchange fluxes. Furthermore, we found that there were piecewise–function relationships (Peak function–constant equation) between light transmittance under the different canopies and the numbers of days after crop sowing. The soil–air TGM exchange fluxes showed a parabolic response to changes in light transmittance under the different canopies. A second-order model was established for the response relationship between soil–air TGM exchange flux and soil Hg concentration, total solar radiation above the canopy, and numbers of days after sowing. The estimated annual average soil–air TGM exchange flux was 5.46 ± 21.69 ng m⁻² h⁻¹ at corn–wheat rotation cropland with 30 cm row spacing using this second-order model. Our results might a data reference and a promising foundation for future model development of soil–air TGM exchange in croplands under different crop cultivars and planting densities.

With the high production and consumption of antibiotics in recent years due to increasing economic development and improving population health, China is facing serious antibiotic pollution in the environment, and it is becoming a significant threat to ecology and human health. This study explores the spatial distribution patterns of 65 antibiotics in soil, surface water and coastal water based on a systematic review. Potential emission sources of antibiotics are also analyzed using data extracted from the reviewed literature. The results suggest that China has very high antibiotic detection rates of 100%, 98.0% and 96.4% for soil, surface water and coastal water, respectively. Regions with high antibiotic levels are mainly located in Bohai Bay, including the Beijing‒Tianjin‒Hebei region, Liaoning and Shandong Provinces, and Yangtze River. Tetracyclines (TCs) and quinolones (QNs) are the dominant antibiotics observed in soil and are mainly attributed to the use of manure as fertilizer and the reuse of domestic wastewater. Sulfonamides (SAs), macrolides (MLs), TCs and QNs are the dominant antibiotics observed in surface water and are mainly attributed to aquaculture and the emission of domestic sewage. QNs are the dominant antibiotics observed in coastal water and are mainly attributed to marine cultivation. The detection frequencies and concentrations of TCs, QNs, SAs and MLs in both soil and water are much higher than those in other developed countries. Suggestions including restricting antibiotic usages in livestock farming and aquaculture, innovation of wastewater treatment technology to improve antibiotic removal rate, and establishing guidelines on antibiotic concentration for wastewater discharge and organic fertilizer are provided.

Natural birnessite-like minerals are commonly enriched in various transitional metals (TMs), which greatly modify the mineral structure and properties. However few studies are yet conducted systematically on the effects of TM doping on birnessite reactivity towards Cr(III) oxidation. In the present study, the transformation behaviors of Cr(III) on Co-, Ni-, V-containing birnessites were investigated. Co and Ni doping generally decrease the mineral crystalline sizes and hydrodynamic sizes (DH) while V-doping greatly decreases the crystalline sizes but not the DH, owing to particle aggregation. Co and Ni firstly decrease and then increase the mineral zeta potentials (ζ) at pH4 while V decreases ζ. Electrochemical specific capacitances for Co-containing birnessites are gradually reduced, while those for Ni-doped birnessites are slightly reduced and for V-doped birnessites increased, which have a positively linear relationship with the amounts of Cr(III) oxidized by these samples. Cr(III) removal efficiencies from solution by these Co-, Ni- and V-containing birnessites are 26–51%, ∼62–72% and ∼96–100%, respectively, compared to ∼92% by pure birnessite. Cr(III) oxidation kinetics analysis demonstrates the gradual decrease of Mn(IV) and concurrent increase of Mn(III) and the adsorption of mainly Cr(III) on mineral surfaces. A negatively linear relationship exists between birnessite lateral sizes and the proportions of Mn(IV/III) consumed to oxidize Cr(III). Apparent initial Cr(III) oxidation rate (kobs) for Co-containing birnessites are greatly reduced, while those for Ni-doped samples moderately decreased and for V-doped samples first increased and then decreased. A positively or negatively linear relationship exists between kobs or the amount of Mn(II) released and the mineral Mn(IV) content respectively. Cr(III) oxidation probably initiates from layer edge sites of Ni-doped birnessites but the vacancies of Co- and V-containing birnessites. These results provide insights into the reaction mechanisms of Cr(III) with natural birnessite-like minerals.

With the constant quest for new sources of superfoods to supplement the largely nutrient deficient diet of the modern society, sea cucumbers are gaining increasing popularity. Three species of sea cucumbers, Cucumaria frondosa, Apostichopus californicus and Apostichopusjaponicus were collected from three geographical regions, Atlantic and Pacific coast of Canada and Yellow sea/ East China sea in China, respectively. These organisms were sectioned into parts (body wall, tentacles, internal organ, skin and muscle) and analysed for total arsenic (As) by inductively coupled plasma mass spectrometry (ICP-MS) and As species by high-performance liquid chromatography (HPLC) coupled to ICP-MS. Normal and reversed sequential extractions were optimised to address As distribution between lipids (polar and non-polar) and water-extractable fractions. Two extraction methods for water-extractable As were compared in terms of the number and the amount of extracted species. The results revealed that total As concentration and As species distribution varies significantly between sea cucumbers species. Total As in studied body parts ranged between 2.8 ± 0.52 and 7.9 ± 1.2 mg kg⁻¹, with an exception of the muscle tissue of A. californicus, where it reached to 36 ± 3.5 mg kg⁻¹. Arsenobetaine (AsB) was the most abundant As species in A. californicus and A.japonicus, however, inorganic As represented over 70% of total recovered As in the body parts of C. frondosa. Arsenosugars-328 and 482 were found in all studied body parts whereas arsenosugar-408 was only found in the skin of A. californicus. This is the first time that such a variation in As species distribution between sea cucumber species has been shown.

Bacteria with arsenate-reducing (ars) and arsenite-oxidizing (aio) genes usually co-exist in aerobic environments, but their contrast impacts on arsenic (As) speciation and mobility remain unclear. To identify which kind of bacteria dominate As speciation under oxic conditions, we studied the biotransformation of adsorbed As on goethite in the co-existence of Pantoea sp. IMH with ars gene and Achromobacter sp. SY8 with aio gene. The incubation results show that SY8 dominated the dissolved As speciation as As(V), even though aio exhibited nearly 5 folds lower transcription levels than ars in IMH. Nevertheless, our XANES results suggest that SY8 showed a negligible effect on solid-bound As speciation whereas IMH reduced adsorbed As(V) to As(III). The change in As speciation on goethite surfaces led to a partial As structural change from bidentate corner-sharing to monodentate corner-sharing as evidenced by our EXFAS analysis. Our Mössbauer spectroscopic results suggest that the incubation with SY8 reduced the degree of crystallinity of goethite, and the reduced crystallinity can be partly compensated by IMH. The changes in As adsorption structure and in goethite crystallinity had a negligible effect on As release. The insights gained from this study improve our understanding of biotransformation of As in aerobic environment.

We present here a comprehensive study (1-year regular sampling) on the occurrence of major families of organic plastic additives in the Rhône River surface waters. Potential sources and contaminant export are also discussed. A total of 22 dissolved phase samples were analyzed for 22 organic additives mainly used in the plastic industry, including organophosphate esters (OPEs), phthalates (PAEs) and bisphenols (BPs). Our results indicate that PAEs were the most abundant class, with concentrations ranging from 97 to 541 ng L⁻¹, followed by OPEs (85–265 ng L⁻¹) and BPs (4–21 ng L⁻¹). Among PAEs, diethylhexyl phthalate (DEHP) was the most abundant compound, whereas TCPP (Tris(1-chloro-2-propyl) phosphate) and TnBP (Tri(n-butyl)phosphate) were the predominant OPEs. Bisphenol S was the only BP detected. 5–54 metric tons year⁻¹ of dissolved organic plastic additives of emerging concern are estimated to be exported to the Gulf of Lion by the Rhône River, which is the main freshwater source of the Mediterranean Sea.

This study forms the first basic assessment of microphytobenthos (MPB) dynamics in micro-estuaries and micro-outlets in southern Africa. It examines MPB community responses to environmental variables and further investigates MPB composition qualitatively across different micro-estuaries and micro-outlets over four seasons in a warm temperate region of the subcontinent. Combinations of multivariate analyses were used to explore similarities and differences in MPB communities between systems. Human-induced catchment changes between microsystems ranged from no alteration (rating 0; mostly micro-outlets) to extreme modification (rating 5; mostly micro-estuaries). Two hundred and sixty-seven MPB taxa were identified within all the microsystems, with 247 and 230 MPB taxa being observed in the micro-estuaries and micro-outlets, respectively. The MPB communities differed slightly in terms of microsystem types and seasons, but no significant differences were observed. Multivariate analyses (i.e. Boosted Regression Trees, Canonical Correspondence Analysis) showed that water column variables were significant and important in structuring MPB communities, with soluble reactive phosphorus, sediment pH, turbidity, ammonium and temperature being documented as key drivers. The MPB community composition clearly reflected the influence of catchment anthropogenic activities on species composition and structure. Moderately modified catchments resulted in MPB community structure variation among water bodies in relationship to land use and salinity gradients. The study found that; (i) by virtue of their size, microsystems and their catchments are likely to be particularly vulnerable to anthropogenic pressures when compared to systems of larger size; (ii) a typical impacted state may reflect reduced environmental heterogeneity which, compared to larger systems, may be achieved over much shorter time periods (following a particular event) or under much less intensive impacts; and (iii) the response in terms of MPB structure may predictably reflect a concomitant change from a complex community dynamic (structure and spatio-temporal attributes) to one that approaches a homogeneous structure (poor spatial zonation, strong taxonomic dominance, low species diversity).