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Assessing the in situ bacterial diversity and composition at anthropogenically active sites using the environmental DNA (eDNA) Full text
2021
Garlapati, Deviram | Kumar, B Charan | Muthukumar, C. | Madeswaran, P. | Ramu, K. | Murthy, M.V Ramana
In this study, we identified the in situ bacterial groups and their community structure in coastal waters influenced by anthropogenic inputs. The use of environmental DNA (eDNA) and high throughput sequencing (HTS) were employed to derive accurate and reliable information on bacterial abundance. The V3 and V4 hypervariable regions of the 16S rRNA gene were amplified and the sequences were clustered into operational taxonomic units to analyze the site-specific variations in community composition. The percentage composition within the bacterial orders varied significantly among nearshore anthropogenic hotspots and offshore (5 km) samples. The microbial network constructed taking the bacterial abundance as nodes displayed strong positive and negative correlations within the bacterial families. Overall, the use of eDNA coupled with HTS is an incredible means for monitoring and assessing the abundance of bacterial communities and also serves as a biomonitoring tool to understand the degree of anthropogenic contamination in coastal waters.
Show more [+] Less [-]Enhancing growth of mangrove seedlings in the environmentally extreme Arabian Gulf using treated sewage sludge Full text
2021
Erftemeijer, Paul L.A. | Cambridge, Marion L. | Price, Brae A. | Ito, Satoshi | Yamamoto, Hiroshi | Agastian, Titus | Burt, John A.
The response of mangrove (Avicennia marina) seedlings to treated (wet) sludge from a sewage treatment plant (STP) was tested in a randomized block design experiment at a tree nursery on Mubarraz Island in the Arabian Gulf. The growth response of seedlings to half-strength and full-strength STP sludge was monitored over 103 days and compared with the response to freshwater, seawater and half-strength seawater treatments. Sludge treatments resulted in significantly greater plant growth, leaf number, leaf biomass and root biomass than the other treatments did. The positive effect of STP sludge on seedling growth is attributed to enhanced levels of total nitrogen (8.9 ± 0.1 mg l⁻¹) and total phosphorus (7.8 ± 0.2 mg l⁻¹) in the sludge and its low salinity. These results suggest that sludge from sewage treatment plants may be beneficially used in mangrove nurseries and plantations in this arid region, where soils are nutrient-poor and fresh water is scarce.
Show more [+] Less [-]Dissolved and particulate nitrogen species partitioning and distribution in the Danshuei River estuary, northern Taiwan Full text
2021
Fang, Tien Hsi | Chen, Wei Hsiang
Danshuei River Estuary (DRE) total and inorganic nitrogen in the dissolved (TDN, DIN) and particulate (TPN, PIN) phases were analyzed to study their distribution and partitioning. The carbon contents in particles were also analyzed. The upper estuary contained higher ammonium concentration (304–557 μM), leading to TDN completely dominating (>95%) the total N (TDN + TPN) pool within the DRE. Ammonium played a crucial role in controlling the speciation variation of DIN and partitioning between dissolved and particulate phases. Nitrification seemed to occur in the salinity >30 region where elevated percentages of nitrite and nitrate were observed. PON dominated the particulate N and contributed an average of 62% of the TPN pool. A constant organic C/N ratio (6.55) was observed in particles, indicating that POM was mainly from phytoplankton detritus. The N distribution coefficient values, log(KD), ranged from 3 to 4, suggesting that the affinity of DIN for particles was weak.
Show more [+] Less [-]Influence of tidal events on the body-size spectrum of periphytic ciliates for marine bioassessment using artificial substrata Full text
2021
Zhong, Xiaoxiao | Yu, Shitao | Xu, Henglong
As an internal functional trait of a community, the body-size spectrum is a highly informative indicator for bioassessment of water/environmental quality in aquatic ecosystems. To determine the influence of tidal events on body-size spectra of protozoan periphytons, a 3-month baseline survey was conducted in Korean coastal waters using the polyurethane foam enveloped slide system (PFES) and conventional slide system (CS). The body-size spectrum of the protozoans showed a clear temporal pattern during the study period using both sampling systems. However, the temporal dynamics showed significantly different trajectories in the body-size spectrum between the two sampling methods during the study period. The bootstrapped average analysis revealed that the patterns of the body-size spectrum were significantly different between the PFES and CS systems, especially in terms of frequency of occurrence. These findings suggest that the tidal events may significantly influence body-size spectrum of periphytic ciliates for bioassessment in marine ecosystems.
Show more [+] Less [-]Reducing vessel noise increases foraging in endangered killer whales Full text
2021
Williams, Rob | Ashe, Erin | Yruretagoyena, Laurel | Mastick, Natalie | Siple, Margaret | Wood, Jason | Joy, Ruth | Langrock, Roland | Mews, Sina | Finne, Emily
Disturbance from underwater noise is one of the primary threats to the critically endangered southern resident killer whales (SRKWs). Previous studies have demonstrated that SRKWs spend less time feeding when vessels are present. In 2018, we measured the effects of a voluntary vessel slowdown action in SRKW critical habitat to assess whether ship speed (and related source level) affects foraging behaviour. Observations of SRKWs and ships were collected from land-based sites on San Juan Island, WA, USA, overlooking the Haro Strait slow-down area. Exploratory analyses found little support for a linear relationship between ship speed and SRKW behaviour, but strong support between received noise level from ships and the probability of SRKWs engaging in foraging activity. Reducing ship speed, and therefore ship noise amplitude will help decrease the probability of ship noise disrupting SRKW foraging activity and may help to increase the proportion of accessible salmon.
Show more [+] Less [-]Assessment of marine litter through remote sensing: recent approaches and future goals Full text
2021
Salgado-Hernanz, Paula M. | Bauzà, Joan | Alomar, Carme | Compa, Montserrat | Romero, Laia | Deudero, Salud
Assessment of marine litter through remote sensing: recent approaches and future goals Full text
2021
Salgado-Hernanz, Paula M. | Bauzà, Joan | Alomar, Carme | Compa, Montserrat | Romero, Laia | Deudero, Salud
This bibliographic review provides an overview of techniques used to detect marine litter using remote sensing. The review classified studies in terms of platform (satellite, aircrafts, drones), sensors (passive or active), spectral (visible, infrared, microwaves), spatial resolution (<1 to >30 m), type and size (macroplastics, microplastics), or classification methodology (sighting, photointerpretation, supervised). Most studies applied satellite information to address marine litter using multi- and hyper- spectral optical sensors. The correspondence analysis on analyzed variables exhibited that aircrafts with high spatial resolution (<3 m) with optical sensors (λ = 400 to 2500 nm) seem to be the most optimum combination to target marine litter, while satellites carrying Synthetic Aperture Radar (SAR) sensors (λ = 3.1 to 5.6 cm) may detect sea-slicks associated to surfactants that might contain high concentration of microplastics. Gaps indicate that future goals in marine litter detection should be addressed with platforms including optical and SAR sensors.
Show more [+] Less [-]Assessment of marine litter through remote sensing: recent approaches and future goals Full text
2021
Salgado-Hernanz, Paula | Bauz, Joan | Alomar, Carme | Compa, Montserrat | Romero, Laia | Deudero, Salud
This bibliographic review provides an overview of techniques used to detect marine litter using remote sensing. The review classified studies in terms of platform (satellite, aircrafts, drones), sensors (passive or active), spectral (visible, infrared, microwaves), spatial resolution (<1 to >30 m), type and size (macroplastics, microplastics), or classification methodology (sighting, photointerpretation, supervised). Most studies applied satellite information to address marine litter using multi- and hyper- spectral optical sensors. The correspondence analysis on analyzed variables exhibited that aircrafts with high spatial resolution (<3 m) with optical sensors (λ = 400 to 2500 nm) seem to be the most optimum combination to target marine litter, while satellites carrying Synthetic Aperture Radar (SAR) sensors (λ = 3.1 to 5.6 cm) may detect sea-slicks associated to surfactants that might contain high concentration of microplastics. Gaps indicate that future goals in marine litter detection should be addressed with platforms including optical and SAR sensors. | SI
Show more [+] Less [-]Assessment of potential ecological risk of microplastics in the coastal sediments of India: A meta-analysis Full text
2021
Ranjani, M. | Veerasingam, S. | Venkatachalapathy, R. | Mugilarasan, M. | Bagaev, Andrei | Mukhanov, Vladimir | Vethamony, P.
Assessment of potential ecological risk of microplastics in the coastal sediments of India: A meta-analysis Full text
2021
Ranjani, M. | Veerasingam, S. | Venkatachalapathy, R. | Mugilarasan, M. | Bagaev, Andrei | Mukhanov, Vladimir | Vethamony, P.
Abundance, chemical composition and ecological risk of microplastics (MPs) in terrestrial and marine environments have merited substantial attention from the research communities. This is the first attempt to comprehend the ecological risk of MPs in sediments along the Indian coast using meta-data. Polymer hazard index (PHI), pollution load index (PLI) and potential ecological risk index (PERI) were used to evaluate the quality of sediments. Areas have high PHI values (>1000) due to the presence of polymers with high hazard scores such as polyamide (PA) and polystyrene (PS). According to PLI values, sediments along the west coast of India (WCI) are moderately contaminated with MPs (PLI: 3.03 to 15.5), whereas sediments along the east coast of India (ECI) are less contaminated (PLI: 1 to 6.14). The PERI values of sediments along the Indian coast showed higher ecological risk for the metropolitan cities, river mouths, potential fishing zones and the remote islands.
Show more [+] Less [-]Assessment of potential ecological risk of microplastics in the coastal sediments of India: A meta-analysis Full text
2021
Ranjani, M. | Veerasingam, S. | Venkatachalapathy, R. | Mugilarasan, M. | Bagaev, Andrei | Mukhanov, Vladimir | Vethamony, P.
Abundance, chemical composition and ecological risk of microplastics (MPs) in terrestrial and marine environments have merited substantial attention from the research communities. This is the first attempt to comprehend the ecological risk of MPs in sediments along the Indian coast using meta-data. Polymer hazard index (PHI), pollution load index (PLI) and potential ecological risk index (PERI) were used to evaluate the quality of sediments. Areas have high PHI values (>1000) due to the presence of polymers with high hazard scores such as polyamide (PA) and polystyrene (PS). According to PLI values, sediments along the west coast of India (WCI) are moderately contaminated with MPs (PLI: 3.03 to 15.5), whereas sediments along the east coast of India (ECI) are less contaminated (PLI: 1 to 6.14). The PERI values of sediments along the Indian coast showed higher ecological risk for the metropolitan cities, river mouths, potential fishing zones and the remote islands. | Qatar University authors were partly supported by the IRCC International Research Co-Fund Collaboration Program of QU (Project No. IRCC-2019-002 ).
Show more [+] Less [-]Seafloor deposition of water-based drill cuttings generates distinctive and lengthy sediment bacterial community changes Full text
2021
Nguyen, Tan T. | Paulsen, John E. | Landfald, Bjarne
Seafloor deposition of water-based drill cuttings generates distinctive and lengthy sediment bacterial community changes Full text
2021
Nguyen, Tan T. | Paulsen, John E. | Landfald, Bjarne
The spatial extent and persistence of bacterial change caused by deposition of water-based drill cuttings on the seafloor were explored by a community-wide approach. Ten centimeter sediment cores were sampled along transects extending from ≤15 m to 250 m from three nearby drilling sites in the southern Barents Sea. Eight months, 8 years and 15 years, respectively, had passed since the completion of the drillings. At locations heavily affected by drill cuttings, the two most recent sites showed distinct, corresponding deviances from native Barents Sea bacterial community profiles. Otherwise marginal groups, including Mollicutes and Clostridia, showed significant increases in relative abundance. Beyond 100 m from the boreholes the microbiotas appeared undisturbed, as they did at any distance from the 15-years old borehole. The extent of the biological distortion, as indicated by the present microbial study, agreed with previously published macrofaunal surveys at the same drilling sites.
Show more [+] Less [-]Seafloor deposition of water-based drill cuttings generates distinctive and lengthy sediment bacterial community changes Full text
2021
Nguyen, Tan Thi | Paulsen, John E. | Landfald, Bjarne
The spatial extent and persistence of bacterial change caused by deposition of water-based drill cuttings on the seafloor were explored by a community-wide approach. Ten centimeter sediment cores were sampled along transects extending from ≤15 m to 250 m from three nearby drilling sites in the southern Barents Sea. Eight months, 8 years and 15 years, respectively, had passed since the completion of the drillings. At locations heavily affected by drill cuttings, the two most recent sites showed distinct, corresponding deviances from native Barents Sea bacterial community profiles. Otherwise marginal groups, including Mollicutes and Clostridia, showed significant increases in relative abundance. Beyond 100 m from the boreholes the microbiotas appeared undisturbed, as they did at any distance from the 15-years old borehole. The extent of the biological distortion, as indicated by the present microbial study, agreed with previously published macrofaunal surveys at the same drilling sites.
Show more [+] Less [-]Quantitative and qualitative determination of microplastics in oyster, seawater and sediment from the coastal areas in Zhuhai, China Full text
2021
Wang, Duojia | Su, Lingcheng | Ruan, Huada Daniel | Chen, Jiajun | Lu, Jianzun | Lee, Chiu-Hong | Jiang, Sabrina Yanan
Microplastics as a new class of environmental contaminants have become the hot issue of global concern. We conducted quantitative and qualitative experiments to investigate microplastics in oyster, seawater and sediment along the Zhuhai coastline. The soft tissues of oysters were digested with potassium hydroxide (10%) and hydrogen peroxide (30%), seawaters and sediments with hydrogen peroxide (30%) to degrade organic matter, and analyzed using a digital camera, optical microscopy and micro-ATR-FTIR. The abundance of microplastics were in the range of 0.14–7.90 n/g in oysters (wet weight), 10.00–27.50 n/L in seawaters and 0.053–0.26 n/g in sediments. The fiber and fragment shape, black color, 101–500 μm of size and polyethylene composition were all classified as the major constituents of microplastics. The level of contaminants in oysters was correlated to those in their surrounding environments. Therefore, oysters may serve as a promising sentinel species for the indication of microplastic pollution in the coastal zone of Zhuhai.
Show more [+] Less [-]Junk food: A preliminary analysis of ingested marine debris by hawksbill Eretmochelys imbricata and olive ridley Lepidochelys olivacea sea turtles (Testudines: Cheloniidae) from the eastern coast of the United Arab Emirates Full text
2021
Yaghmour, Fadi | Al Bousi, Marwa | Al Naqbi, Halima | Samara, Fatin | Ghalayini, Thouraya
For the first time, the qualitative and quantitative characteristics of marine debris ingested by six hawksbill (Eretmochelys imbricata) and seven olive ridley (Lepidochelys olivacea) sea turtles from the Gulf of Oman coast of the United Arab Emirates were investigated. The numeric and gravimetric proportions of ingested marine debris obtained from the esophagus, stomach and intestines were quantified following categories of presumed sources, Marine Strategy Framework Directive (MSFD), rigidity, color and plastic polymer types. Marine debris was observed in 28.6% of olive ridley (x̅: 2.00 items; 4.83 g) and 83.3% of hawksbill specimens (x̅: 6.00 ± 2.32 items; 0.32 ± 0.24 g). Overall, the results of this preliminary study suggest that hawksbill sea turtles were ingesting marine debris at higher frequencies and that plastics were observed to be the most predominant debris ingested. However, non-plastic rubbish, particularly metallic fishing gear (fish hooks and fish traps), were observed to present lethal hazards for both species.
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