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Prevalence and diversity of norovirus genogroups I and II in Hong Kong marine waters and detection by real-time PCR Full text
2012
Yang, Ning | Qi, Huizhou | Wong, Minnie Man Lai | Wu, Rudolf Shiu Sun | Kong, Richard Yuen Chong
Marine waters from six sites around Hong Kong with varying levels of sewage pollution were examined for noroviruses (NoVs) by PCR cloning and sequencing of a highly-variable N-terminal region of the VP1 capsid gene, at the ORF1-ORF2 junction of NoV. Phylogenetic analysis of genogroups GI- and GII-specific PCR clones obtained from different marine sites indicated that human NoV GI.1 and GII.4 strains are the most prevalent genotypes circulating in Hong Kong waters. GI- and GII-specific TaqMan-based real-time PCR assays targeting the ORF1-ORF2 junction of NoVs were used to quantify NoV particles in marine water samples in parallel with total Escherichia coli counts which were enumerated on TBX medium. No correlation of any significance between NoV and E. coli counts was observed which highlighted the inadequacy in using E. coli as a fecal indicator to predict the level of NoVs in marine waters to protect public health.
Show more [+] Less [-]Distribution and seasonal variation in the partial pressure of CO₂ during autumn and winter in Jiaozhou Bay, a region of high urbanization Full text
2012
Zhang, Longjun | Siuvai, Ming | Liu, Qizhen
We investigated the partial pressure of carbon dioxide (pCO₂) in Jiaozhou Bay (JZB), which is surrounded by the economically developed city of Qingdao, during two cruises undertaken in November, 2007 (autumn) and February, 2008 (winter). Results indicated that sea surface pCO₂ in autumn varied between 315 and 720μatm, with an average level of 418μatm. In winter the sea surface pCO₂ ranged from 145 to 315μatm with an average of 249μatm, which is below atmospheric pCO₂. Despite seasonal temperature variation between autumn and winter, it was noted that biological process (production and respiration) were responsible for both spatial and seasonal variation during these seasons. We found that Jiaozhou Bay served as a net atmospheric CO₂ source in autumn (November) (2.87mmolm⁻²d⁻¹), while in winter (February) it served as a net sink (−16.22mmolm⁻²d⁻¹).
Show more [+] Less [-]Occurrence of selected estrogens in mangrove sediments Full text
2012
Froehner, Sandro | Machado, Karina Scurupa | Stefan, Elisa | Bleninger, Tobias | da Rosa, Edson Cordova | de Castro Martins, César
This paper presents results related to the occurrence and distribution of estrogens along the Brazilian coast. Three mangrove areas were chosen to evaluate the presence of estrogens in surface sediments of mangrove forests. The presence of estrogens was observed in all studied sites. 17-α-Ethinylestradiol (EE2), a synthetic estrogen, was the most common and has been found in higher concentration (0.45–129.78ng/g) compared to 17-β-estradiol (E1) and estrone (E2) (both being natural estrogens). The concentrations of E1 and E2 ranged from 0.02 to 49.27ng/g and 0.03 to 39.77ng/g, respectively. Theoretically, under anaerobic conditions EE2 can be reduced to E1 even in environments such as sediments of mangrove forests, which are essentially anaerobic. Even if the concentrations of estrogens seem to be insignificant in some samples, the effects remain uncertain.
Show more [+] Less [-]Long-term monitoring of heavy metals in Chilean coastal sediments in the eastern South Pacific Ocean Full text
2012
Chandía, Cristian | Salamanca, Marco
Concentrations of seven metals (Al, Cd, Cu, Fe, Pb, Ni, Zn) were determined in 256 surface sediment samples, collected between May 2006 and November 2009, from 15 stations at the mouth of the Itata River and its adjacent marine zone (central-southern Chile) as part of an environmental monitoring program. The objectives of the work were to: (i) establish baseline metal concentrations in the sediments of the area and (ii) identify tendencies in the spatial and temporal distribution of the metals in these marine sediments. Concentrations were highest in the north zone of the Itata River mouth (stations E2C, E13C) for all the metals and at the stations farthest offshore from the mouth (E4, E6) for Cu, Fe, Pb, and Ni. The ranges in those concentrations were lower than those reported in other studies performed along the Chilean coast and lower than those observed in most other coastal systems around the world. Based on results of the indices used (geoaccumulation index, enrichment factor), the coastal sediments were not measurably elevated above natural levels.
Show more [+] Less [-]Anthropogenic “Litter” and macrophyte detritus in the deep Northern Gulf of Mexico Full text
2012
Wei, Chih-Lin | Rowe, Gilbert T. | Nunnally, Clifton C. | Wicksten, Mary K.
A deep-sea trawl survey of the Northern Gulf of Mexico has documented the abundance and diversity of human-generated litter and natural detrital plant material, from the outer margin of the continental shelf out to the Sigsbee abyssal plain. Plastics were the most frequently encountered type of material. Litter and debris were encountered more frequently in the eastern than in the western GoM. Land-derived plant material was located primarily within the head of the Mississippi Canyon, whereas ocean-derived plant material was spread evenly throughout the NE GoM. Human discards were principally from ships offshore. Some of the material was contained in metal cans that sank to the sea floor, probably in order to conform to international agreements that prohibit disposal of toxic material and plastics. The Mississippi Canyon was a focal point for litter, perhaps due to topography, currents or proximity to shipping lanes.
Show more [+] Less [-]Heavy metals contamination levels at the Coast of Aliağa (Turkey) ship recycling zone Full text
2012
Neşer, Gökdeniz | Kontas, Aynur | Ünsalan, Deniz | Uluturhan, Esin | Altay, Oya | Darılmaz, Enis | Küçüksezgin, Filiz | Tekoğul, Nermin | Yercan, Funda
Aliağa Bay is one of the most important maritime zones of Turkey where shipping activity, shipbreaking industry, steel works and petrochemical complexes exist together. Concentrations of heavy metals and organic carbon in sediment of the Aliağa Bay were investigated to evaluate an environmental risk assessment from metals contamination in 2009–2010. Comparison of the metal concentrations with average shale and Mediterranean background levels revealed that most of the samples from the Aliağa were polluted with Hg, Cd, Pb, Cr, Cu, Zn, Mn and Ni. It was found that Hg, Pb, Cu, Zn and Ni levels in Aliağa Bay exceeded the PEL values. Sediments, contaminated with Pb, Cr, Cu, Zn and Ni were considered as heavily polluted per the SQG.
Show more [+] Less [-]Benthic recovery after fish farming cessation: A “beyond-BACI” approach Full text
2012
Aguado-Giménez, F. | Piedecausa, M.A. | Gutiérrez, J.M. | García-Charton, J.A. | Belmonte, A. | García-García, B.
The development of a benthic environment after fish-farming cessation was examined. To ascertain whether recovery occurred, several abiotic (granulometry, acid-volatile sulfides, total phosphorus and redox potential) and biotic (polychaete abundance) variables were monitored using a “beyond-BACI” approach. Before the cessation of farming, the geochemical conditions and polychaete assemblages differed among the impacted and control sites. After cessation, an improvement of the geochemical conditions was achieved. A significant tendency toward a recovery of the polychaete assemblage in the impacted area was observed, but significant differences still remained compared with the control sites. The acid-volatile sulfide level was responsible for these differences. The abundance of polychaete families associated with organically enriched sediments diminished at the impacted site after cessation, whereas the abundance of some sensitive and omnivorous families increased. The “beyond-BACI” approach provided a wider framework than other approaches, enabling us to differentiate the natural variability from those changes induced by the fish farm and farming cessation.
Show more [+] Less [-]Levels and spatial distribution of trace elements in macroalgae species from the Todos os Santos Bay, Bahia, Brazil Full text
2012
Brito, Geysa B. | de Souza, Thaís L. | Bressy, Fernanda C. | Moura, Carlos W.N. | Korn, Maria Graças A.
Concentrations of elements (As, Ba, Cd, Co, Cr, Cu, Li, Mn, Ni, Pb, V, and Zn) were determined in ten species of macroalgae collected from six sites in the Todos os Santos Bay, Brazil, between May and July of 2010. An optimized microwave-assisted digestion procedure was used to digest the samples. The elements were determined by inductively coupled plasma mass spectrometry (ICP-MS). A wide range of metal concentrations were observed between the species analysed. Somewhat higher concentrations of Cd (5.99μgg⁻¹), Co (372μgg⁻¹), Mn (640μgg⁻¹), Ni (17.2μgg⁻¹) and Zn (51.4μgg⁻¹) were found in the brown macroalgae species Padina spp., whereas elements, such as As (19.7μgg⁻¹) and Pb (8.27μgg⁻¹), were mainly concentrated in the species Sargassum spp. and Bostrychia montagnei, respectively. Statistical analyses (ANOVA) of the Padina data showed significant inter-site differences for all metals examined except nickel.
Show more [+] Less [-]Copper in the sediment and sea surface microlayer near a fallowed, open-net fish farm Full text
2012
Loucks, Ronald H. | Smith, Ruth E. | Fisher, Clyde V. | Brian Fisher, E.
Sediment and sea surface microlayer samples near an open-net salmon farm in Nova Scotia, were analysed for copper. Copper is a constituent of the feed and is an active ingredient of anti-foulants. The salmon farm was placed in fallow after 15years of production. Sampling was pursued over 27months. Elevated copper concentrations in the sediments indicated the farm site as a source. Bubble flotation due to gas-emitting sediments from eutrophication is a likely process for accumulating copper in the sea surface microlayer at enriched concentrations. Elevated and enriched concentrations in the sea surface microlayer over distance from the farm site led, as a result of wind-drift, to an enlarged farm footprint. The levels of copper in both sediments and sea surface microlayer exceeded guidelines for protection of marine life. Over the 27months period, copper levels persisted in the sediments and decreased gradually in the sea surface microlayer.
Show more [+] Less [-]Spatial and temporal variations in nitrogen and phosphorous nutrients in the Yangtze River Estuary Full text
2012
Chen, Yaxin | Liu, Ruimin | Sun, Chengchun | Zhang, Peipei | Feng, Chenghong | Shen, Zhenyao
Based on spatial interpolation data from 2003 to 2010, combined with almost 30years of nitrogen and phosphorus pollutant data, this research analyzed the variations in total nitrogen (TN), nitrate nitrogen (NO₃-N), total phosphorus (TP) and phosphate-P (PO₄-P) in the Yangtze River Estuary (YRE). On the annual and seasonal timescales, nitrogen and phosphorus concentrations exhibited increasing trends overall, and the fluctuations in the concentrations of TN, TP and PO₄-P significantly increased during the last three decades, especially after 2003, because of the more prevalent human activities and nonpoint sources in the area. Specifically, a high-concentration area of TN was found downstream of the North Branch of the YRE. Considering the spatial distribution of the nutrients, combined with a tidal flood current and a time span of 7years, the TN maximum increased from approximately 3.07mg/L to 4.48mg/L. The TP maximum also rose from approximately 0.25mg/L to 0.34mg/L because of a high-concentration area of TP in the South Branch of the YRE due to the confluence with the Huangpu River. Additionally, there was an expansion of high-concentration areas of TN (⩾3.0mg/L) and of TP (⩾0.20mg/L).
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