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Dynamics of coastal bacterial community average ribosomal RNA operon copy number reflect its response and sensitivity to ammonium and phosphate
2020
Dai, Tianjiao | Zhao, Yanan | Ning, Daliang | Huang, Bei | Mu, Qinglin | Yang, Yunfeng | Wen, Donghui
The nutrient-rich effluent from wastewater treatment plants (WWTPs) constitutes a significant disturbance to coastal microbial communities, which in turn affect ecosystem functioning. However, little is known about how such disturbance could affect the community’s stability, an important knowledge gap for predicting community response to future disturbances. Here, we examined dynamics of coastal sediment microbial communities with and without a history of WWTP’s disturbances (named H1 and H0 hereafter) after simulated nutrient input loading at the low level (5 mg L⁻¹ NH₄⁺-N and 0.5 mg L⁻¹ PO₄³⁻-P) or high level (50 mg L⁻¹ NH₄⁺-N and 5.0 mg L⁻¹ PO₄³⁻-P) for 28 days. H0 community was highly sensitive to both low and high nutrient loading, showing a faster community turnover than H1 community. In contrast, H1 community was more efficient in nutrient removal. To explain it, we found that H1 community constituted more abundant and diversified r-strategists, known to be copiotrophic and fast in growth and reproduction, than H0 community. As nutrient was gradually consumed, both communities showed a succession of decreasing r-strategists. Accordingly, there was a decrease in community average ribosomal RNA operon (rrn) copy number, a recently established functional trait of r-strategists. Remarkably, the average rrn copy number of H0 communities was strongly correlated with NH₄⁺-N (R² = 0.515, P = 0.009 for low nutrient loading; R² = 0.749, P = 0.001 for high nutrient loading) and PO₄³⁻-P (R² = 0.378, P = 0.034 for low nutrient loading; R² = 0.772, P = 0.001 for high nutrient loading) concentrations, while that of H1 communities was only correlated with NH₄⁺-N at high nutrient loading (R² = 0.864, P = 0.001). Our results reveal the potential of using rrn copy number to evaluate the community sensitivity to nutrient disturbances, but community’s historical contingency need to be taken in account.
Show more [+] Less [-]Rice-derived facultative endophytic Serratia liquefaciens F2 decreases rice grain arsenic accumulation in arsenic-polluted soil
2020
Cheng, Cheng | Nie, Zong-Wei | He, Lin-Yan | Sheng, Xia-Fang
In this study, an arsenic (As)-resistant facultative endophytic bacterial strain, F2, was isolated from the root of Oryza sativa Longliangyou Huazhan and identified as Serratia liquefaciens according to 16S rRNA gene sequence analysis. Strain F2 was characterized for i) its impacts on As immobilization in solution and rice tissue As accumulation, and ii) the mechanisms involved for different levels of As-pollution in soils. In strain F2-inoculated culture medium, the concentration of As decreased, while the pH, cell growth, and cell-immobilized As significantly increased over time. Grain As content reduced by between 23 and 36% in strain F2-inoculated rice plants in comparison to the control. Available As content decreased by between 28 and 52%, but unavailable As content increased by between 27 and 46% in the strain F2-inoculated soil when compared with the controls. Moreover, the strain decreased the As translocation factor by between 34 and 46%, but increased the As concentration by between 24 and 70% in Fe plaque on the rice root surfaces in comparison to the controls. These results suggested that strain F2 decreased the rice grain As uptake by i) decreasing available As in soil, ii) increasing rice root surface As adsorption, and iii) decreasing As translocation from the roots to grains. Our findings may provide a new rice-derived facultative endophytic bacteria-assisted approach for decreasing the As uptake to rice grains in As-polluted soils.
Show more [+] Less [-]Greenness around schools associated with lower risk of hypertension among children: Findings from the Seven Northeastern Cities Study in China
2020
Xiao, Xiang | Yang, Bo-Yi | Hu, Liwen | Markevych, Iana | Bloom, Michael S. | Dharmage, Shyamali C. | Jalaludin, Bin | Knibbs, Luke D. | Heinrich, Joachim | Morawska, L. (Lidia) | Lin, Shao | Roponen, Marjut | Guo, Yuming | Lam Yim, Steve Hung | Leskinen, Ari | Komppula, Mika | Jalava, Pasi | Yu, Hong-Yao | Zeeshan, Mohammed | Zeng, Xiao-Wen | Dong, Guang-Hui
Evidence suggests that residential greenness may be protective of high blood pressure, but there is scarcity of evidence on the associations between greenness around schools and blood pressure among children. We aimed to investigate this association in China. Our study included 9354 children from 62 schools in the Seven Northeastern Cities Study. Greenness around each child’s school was measured by NDVI (Normalized Difference Vegetation Index) and SAVI (Soil-Adjusted Vegetation Index). Particulate matter ≤ 1 μm (PM1) concentrations were estimated by spatiotemporal models and nitrogen dioxide (NO2) concentrations were collected from air monitoring stations. Associations between greenness and blood pressure were determined by generalized linear and logistic mixed-effect models. Mediation by air pollution was assessed using mediation analysis. Higher greenness was consistently associated with lower blood pressure. An increase of 0.1 in NDVI corresponded to a reduction in SBP of 1.39 mmHg (95% CI: 1.86, −0.93) and lower odds of hypertension (OR = 0.76, 95% CI: 0.69, 0.82). Stronger associations were observed in children with higher BMI. Ambient PM1 and NO2 mediated 33.0% and 10.9% of the association between greenness and SBP, respectively. In summary, greater greenness near schools had a beneficial effect on blood pressure, particularly in overweight or obese children in China. The associations might be partially mediated by air pollution. These results might have implications for policy makers to incorporate more green space for both aesthetic and health benefits.
Show more [+] Less [-]Neonatal exposure to a glyphosate-based herbicide alters the uterine differentiation of prepubertal ewe lambs
2020
Alarcón, Ramiro | Rivera, Oscar E. | Ingaramo, Paola I. | Tschopp, María V. | Dioguardi, Gisela H. | Milesi, Mercedes M. | Muñoz-de-Toro, Mónica | Luque, Enrique H.
The exposure to endocrine-disrupting compounds (EDCs), such as glyphosate-based herbicides (GBHs), during early life might alter female fertility. The aim of the present study was to evaluate the effects of neonatal exposure to a GBH on sheep uterine development. To achieve this, Friesian ewe lambs were exposed to GBH (2 mg/kg of body weight/day; n = 12) or vehicle (controls; n = 10) through s.c. injections, from postnatal day (PND) 1 to PND14; on PND45, the uteri were obtained to evaluate histomorphological and molecular parameters. Morphological parameters were determined by picrosirius-hematoxylin staining. Protein expression of Ki67 (as a cell proliferation marker), p27, and molecules involved in uterine organogenetic differentiation was measured by immunohistochemistry. We also determined the mRNA expression of the IGF molecular pathway by RT-PCR. Although histomorphology was not modified, the uteri of GBH-exposed ewe lambs showed lower cell proliferation, together with higher p27 protein expression. In addition, the uteri of GBH-exposed ewe lambs showed increased gene expression of insulin-like growth factor binding protein 3 (IGFBP-3), decreased expression of ERα in the luminal (LE) and glandular (GE) epithelia and in the subepithelial stroma (SS), and lower PR expression in the LE but higher in the GE and SS. In addition, GBH treatment decreased the uterine expression of Wnt5a in the GE, of Wnt7a in the SS, of β-catenin in the LE and GE, of Hoxa10 in the SS, and of Foxa2 in the GE as compared with controls. In conclusion, neonatal exposure to GBH decreased cell proliferation and altered the expression of molecules that control proliferation and development in the uterus. All these changes might have adverse consequences on uterine differentiation and functionality, affecting the female reproductive health of sheep. GBH may be responsible for uterine subfertility, acting as an EDC.
Show more [+] Less [-]Impact of sand mining on the carbon sequestration and nitrogen removal ability of soil in the riparian area of Lijiang River, China
2020
Qin, Yunbin | Chen, Zhihao | Ding, Bangjing | Li, Zhengkui
Riparian areas are widely recognized as the main areas for carbon sequestration and nitrogen pollution removal, while little is known about the effects of the respective sand mining activities on riparian zones. In this study, the effects of sand mining activities on the soil organic carbon (SOC) storage, different N-removal processes (Feammox, anammox, and denitrification), and composition of the relative bacterial community at a depth of 0–40 cm were determined based on investigations in riparian sand mining areas and adjacent forestlands. The SOC density of the sand mining areas (2.59 t ha⁻¹, depth of 0–40 cm) was lower than that of the riparian forestlands (80.42 t ha⁻¹). Compared with those of the riparian forestland, the sand mining area exhibited a dramatic reduction in the CO₂-fixed gene abundances (cbbL) and a significant change in the composition of cbbL-containing bacteria. The rates of the Feammox (0.038 ± 0.014 mg N kg⁻¹ d⁻¹), anammox (0.017 ± 0.017 mg N kg⁻¹ d⁻¹), and denitrification (0.090 ± 0.1 mg N kg⁻¹ d⁻¹) processes at a depth of 0–20 cm in the soil layer of the sand mining area were reduced by 70.17%, 91.5%, and 93.62% compared with those of the riparian forestland, respectively. The riparian areas in the study area (approximately 12 ha, depth of 0–40 cm) destroyed by sand mining activities released approximately 933.96 t stored soil carbon, which reduce the annual carbon sequestration potential by 28.8–40.8 t. Moreover, the potential N-removal rates in the riparian forestlands (depth of 0–20 cm) by the Feammox, anammox, and denitrification processes were 1514.21–1530.95 kg N ha⁻¹ year⁻¹, whereas the potential N-removal rates in the sand mining area were only 121.2–126.19 kg N ha⁻¹ year⁻¹. Therefore, more investigations are necessary for comparing the benefits and damage of sand mining activities in riparian areas before more sand mining activities are approved.
Show more [+] Less [-]Microplastics in water, sediment and fish from the Fengshan River system: Relationship to aquatic factors and accumulation of polycyclic aromatic hydrocarbons by fish
2020
Tien, Chien-Jung | Wang, Zi-Xuan | Chen, Colin S.
The occurrence of microplastics was investigated in water, sediment and fish from the Fengshan River system. All collected samples contained microplastics with 334–1058 items/m³ in the water samples, 508-3987 items/kg dry weight in the sediment samples and 14–94 items/fish in the fish samples. The spatial distribution of microplastics in water and sediments was attributed to anthropogenic discharges, flow dynamics, tidal exchanges and microplastic density. This was evidenced by significant correlations of microplastics with the river pollution index (RPI), chemical oxygen demand (COD), suspended solid (SS), flow velocity and the presence of different polymer types of microplastics in water and sediment. Microplastic abundance in fish was correlated to SS, pH and conductivity, indicating that these water quality variables might affect bioavailability of microplastics to fish. Concentrations of microplastics/cm length of demersal fish at a higher trophic level (Leiognathus equulus and Pomadasys argenteus) were higher than those of a benthopelagic fish (Oreochromis niloticus niloticus). The significant relationships observed suggest that collected fish might prefer to ingest long fibrous microplastics from sediments and large fragmented microplastics from water. The high levels of 3- and 4-ring polycyclic aromatic hydrocarbons (PAHs), particularly fluoranthene and pyrene, in fish muscle revealed that the collected fish species might have a high ability to accumulate these PAHs from food and the environment. Significant relationships between some PAHs in fish and microplastic abundances in water/sediments/fish suggested that these PAHs might be accumulated by fish from contaminated microplastics. This study provides unique information on the factors influencing the spatial distribution of microplastics and the role of microplastics on the accumulation of PAHs by fish.
Show more [+] Less [-]Exposure of honey bee larvae to thiamethoxam and its interaction with Nosema ceranae infection in adult honey bees
2020
Tesovnik, Tanja | Zorc, Minja | Ristanić, Marko | Glavinić, Uroš | Stevanović, Jevrosima | Narat, Mojca | Stanimirović, Zoran
During their lifetime honey bees (Apis mellifera) rarely experience optimal conditions. Sometimes, a simultaneous action of multiple stressors, natural and chemical, results in even greater effect than of any stressor alone. Therefore, integrative investigations of different factors affecting honey bees have to be carried out. In this study, adult honey bees exposed to thiamethoxam in larval and/or adult stage and infected with Nosema ceranae were examined. Newly emerged bees from colonies, non-treated or treated with thiamethoxam, were organized in six groups and kept in cages. Thiamethoxam treated bees were further exposed to either thiamethoxam or Nosema (groups TT and TN), or simultaneously to both (group TTN). Newly emerged bees from non-treated colonies were exposed to Nosema (group CN). From both, treated and non-treated colonies two groups were organized and further fed only with sugar solution (groups C and TC). Here, we present the expression profile of 19 genes in adult worker honey bees comprising those involved in immune, detoxification, development and apoptosis response. Results showed that gene expression patterns changed with time and depended on the treatment. In group TC at the time of emergence the majority of tested genes were downregulated, among which nine were significantly altered. The same gene pattern was observed on day six, where the only significantly upregulated gene was defensin-1. On day nine most of analyzed genes in all experimental groups showed upregulation compared to control group, where upregulation of antimicrobial peptide genes abaecin, defensin-1 and defensin-2 was significant in groups TT and TTN. On day 15 we observed a similar pattern of expression in groups TC and TT exposed to thiamethoxam only, where most of the detoxification genes were downregulated. Additionally RNA loads of Nosema and honey bee viruses were recorded. We detected a synergistic interaction of thiamethoxam and Nosema, reflected in lowest honey bee survival.
Show more [+] Less [-]The role of root apoplastic barriers in cadmium translocation and accumulation in cultivars of rice (Oryza sativa L.) with different Cd-accumulating characteristics
2020
Qi, Xiaoli | Tam, Nora Fung-yee | Li, Wai Chin | Ye, Zhihong
The radial translocation of cadmium (Cd) from the root to the shoot is one of the major processes affecting Cd accumulation in rice (Oryza sativa L.) grains, but few studies have focused on Cd apoplastic transport in rice. The aim of this study was to determine how apoplastic barriers affect Cd translocation via the apoplastic pathway, Cd accumulation levels in upper parts (shoot and grains) of rice cultivars, and the possible mechanism involved. Hydroponic and soil pot trials were conducted to study the development and chemical constituents of apoplastic barriers and their permeability to bypass flow, and to determine Cd localization in the roots of rice cultivars with different Cd-accumulating characteristics. The Cd accumulation in upper parts was positively correlated with bypass flow in the root and the apparent Cd concentration in the xylem, indicating that the apoplastic pathway may play an important role in Cd root-shoot translocation in rice. Apoplastic barriers were deposited closer to the root tip and were thicker in low Cd-accumulating cultivars than in high Cd-accumulating cultivars. The amounts and rates of increase in lignin and suberin were significantly higher in ZD14 (a low Cd-accumulating cultivar) than in FYXZ (a high Cd-accumulating cultivar) under Cd stress, indicating that stronger barriers were induced by Cd in ZD14. The stronger and earlier formation of barriers in the low Cd-accumulating cultivar decreased bypass flow more efficiently, so that more Cd was retained in the root during apoplastic translocation. This was confirmed by localization analyses of Cd in root transverse sections. These results suggest that apoplastic barriers reduce Cd root-to-shoot translocation via the apoplastic pathway, leading to lower Cd accumulation in the upper parts of rice plants. Bypass flow may have the potential to be used as a rapid screening indicator for low Cd-accumulating rice cultivars.
Show more [+] Less [-]PM2.5 and O3 pollution during 2015–2019 over 367 Chinese cities: Spatiotemporal variations, meteorological and topographical impacts
2020
Zhao, Suping | Yin, Daiying | Yu, Ye | Kang, Shichang | Qin, Dahe | Dong, Longxiang
The strict Clean Air Action Plan has been in place by central and local government in China since 2013 to alleviate haze pollution. In response to implementation of the Plan, daytime PM₂.₅ (particulate matter with aerodynamic diameter less than 2.5 μm) showed significant downward trends from 2015 to 2019, with the largest reduction during spring and winter in the North China Plain. Unlike PM₂.₅, O₃ (ozone) showed a general increasing trend, reaching 29.7 μg m⁻³ on summer afternoons. Increased O₃ and reduced PM₂.₅ simultaneously occurred in more than half of Chinese cities, increasing to approximately three-fourths in summer. Declining trends in both PM₂.₅ and O₃ occurred in only a few cities, varying from 19.1% of cities in summer to 33.7% in fall. Meteorological variables helped to decrease PM₂.₅ and O₃ in some cities and increase PM₂.₅ and O₃ in others, which is closely related to terrain. High wind speed and 24 h changing pressure favored PM₂.₅ dispersion and dilution, especially in winter in southern China. However, O₃ was mainly affected by 24 h maximum temperature over most cities. Soil temperature was found to be a key factor modulating air pollution. Its impact on PM₂.₅ concentrations depended largely on soil depth and seasons; spring and fall soil temperature at 80 cm below the surface had largely negative impacts. Compared with PM₂.₅, O₃ was more significantly affected by soil temperature, with the largest impact at 20 cm below the surface and with less seasonal variation.
Show more [+] Less [-]Response of microbial community to the lysis of Phaeocystis globosa induced by a biological algicide, prodigiosin
2020
Zhang, Huajun | Xie, Weijuan | Hou, Fanrong | Hu, Jian | Yao, Zhiyuan | Zhao, Qunfen | Zhang, Demin
Terminating harmful algal blooms by using algicidal agents is a strong disturbance event in marine environment, which has powerful structural influences on microbial ecosystems. But, the response of microbial ecosystem to algicidal agent is largely unknown. Here, we conducted Phaeocystis globosa microcosms to investigate the dynamics, assembly processes, and co-occurrence patterns of microbial communities in response to algicidal process induced by a highly efficient algicidal agent, prodigiosin, by using 16S rRNA gene amplicon sequencing. The α-diversity of microbial community showed no obvious changes during the algicidal process in P. globosa microcosm treated with prodigiosin (group PD). Rhodobacteraceae increased significantly (P < 0.05) during algicidal process in PD, and this was mainly due to the lysis of P. globosa cells. Compared to the control group, the temporal turnover rates of common and rare taxa in PD were significantly higher because of the lysis of P. globosa induced by prodigiosin. Neutral processes mainly drove the assembly of microbial communities in all microcosms, even though the algicidal process induced by prodigiosin had no effect on the assembly processes. In addition, the time-decay relationship and co-occurrence network analysis indicate that rare taxa play important roles in maintaining microbial community stability in response to the algicidal process, rather than prodigiosin. These findings suggest that prodigiosin cannot affect the dynamics of microbial communities directly; however, future investigations into the function of microbial communities in response to prodigiosin remain imperative.
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