Exploiting genetic information to trace plant virus dispersal in landscapes
2017
Picard, Coralie | Dallot, Sylvie | Brunker, Kirstyn | Berthier, Karine | Roumagnac, Philippe | Soubeyrand, Samuel | Jacquot, Emmanuel | Thébaud, Gael | Biologie et Génétique des Interactions Plante-Parasite (UMR BGPI) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro) | Institute of Biodiversity, Animal Health & Comparative Medicine ; University of Glasgow | Unité de Pathologie Végétale (PV) ; Institut National de la Recherche Agronomique (INRA) | Biostatistique et Processus Spatiaux (BioSP) ; Institut National de la Recherche Agronomique (INRA) | INRA/ANSES PhD grant, ANR-funded SMITID project (ANR-16-CE35- 0006), Agropolis Fondation (E-SPACE project) | ANR-16-CE35-0006,SMITID,Méthodes Statistiques pour Inférer les Transmissions de Maladies Infectieuses à partir de Données de Séquençage Haut-Débit(2016) | European Project: 221922
During the past decade, knowledge of pathogen life history has greatly benefited from the advent and development of molecular epidemiology. This branch of epidemiology uses information on pathogen variation at the molecular level to gain insights into a pathogen's niche and evolution and to characterize pathogen dispersal within and between host populations. Here, we review molecular epidemiology approaches that have been developed to trace plant virus dispersal in landscapes. In particular, we highlight how virus molecular epidemiology, nourished with powerful sequencing technologies, can provide novel insights at the crossroads between the blooming fields of landscape genetics, phylogeography, and evolutionary epidemiology. We present existing approaches and their limitations and contributions to the understanding of plant virus epidemiology.
Mostrar más [+] Menos [-]Palabras clave de AGROVOC
Información bibliográfica
Este registro bibliográfico ha sido proporcionado por Institut national de la recherche agronomique