Genome interplay in the grain transcriptome of hexaploid bread wheat

Pfeifer, Matthias | Kugler, Karl, G. | Sandve, Simen, R. | Zhan, Bujie | Rudi, Heidi | Hvidsten, Torgeir, R. | Mayer, Klaus, F. X. | Rogers, Jane | Doležel, Jaroslav | Pozniak, Curtis | Eversole, Kellye | Feuillet, Catherine | Gill, Bikram, B. | Friebe, Bernd | Lukaszewski, Adam, J. | Sourdille, Pierre | Endo, Takashi, R. | Kubaláková, Marie | Číhalíková, Jarmila | Dubská, Zdeňka | Vrána, Jan | Šperková, Romana | Šimková, Hana | Febrer, Melanie | Clissold, Leah | Mclay, Kirsten | Singh, Kuldeep | Chhuneja, Parveen | Singh, Nagendra K | Khurana, Jitendra | Akhunov, Eduard | Choulet, Frédéric | Alberti, Adriana, A. | Barbe, Valérie | Wincker, Patrick | Kanamori, Hiroyuki | Kobayashi, Fuminori | Itoh, Takeshi | Matsumoto, Takashi | Sakai, Hiroaki | Tanaka, Tsuyoshi | Wu, Jianzhong | Ogihara, Yasunari | Handa, Hirokazu | Maclachlan, P Ron | Sharpe, Andrew | Klassen, Darrin | Edwards, David | Batley, Jacqueline | Olsen, Odd-Arne | Lien, Sigbjørn | Steuernagel, Burkhard | Wulff, Brande | Caccamo, Mario | Ayling, Sarah | Ramirez-Gonzalez, Ricardo H | Clavijo, Bernardo J | Wright, Jonathan | Spannagl, Manuel | Martis, Mihaela M | Mascher, Martin | Chapman, Jarrod | Poland, Jesse A | Scholz, Uwe | Barry, Kerrie | Waugh, Robbie | Rokhsar, Daniel S | Muehlbauer, Gary J | Stein, Nils | Gundlach, Heidrun, H. | Zytnicki, Matthias | Jamilloux, Véronique | Quesneville, Hadi | Wicker, Thomas | Faccioli, Primetta | Colaiacovo, Moreno | Stanca, Antonio Michele | Budak, Hikmet | Cattivelli, Luigi | Glover, Natasha | Pingault, Lise | Paux, Etienne | Sharma, Sapna | Appels, Rudi | Bellgard, Matthew | Chapman, Brett | Nussbaumer, Thomas | Bader, Kai Christian | Rimbert, Hélène | Wang, Shichen | Knox, Ron | Kilian, Andrzej | Alaux, Michael, M. | Alfama, Françoise | Couderc, Loïc | Guilhot, Nicolas, N. | Viseux, Claire | Loaec, Mikael | Keller, Beat | Praud, Sébastien | Plant Genome and Systems Biology (PGSB) ; Helmholtz Zentrum München = German Research Center for Environmental Health (HMGU) | Centre for Integrative Genetics ; Norwegian University of Life Sciences (NMBU) | Department of Chemistry, Biotechnology and Food Science ; Norwegian University of Life Sciences (NMBU) | Eversole Associates | Centre of Plant Structural and Functional Genomics ; Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS) ; Czech Academy of Sciences [Prague] (CAS)-Czech Academy of Sciences [Prague] (CAS) | University of Saskatchewan [Saskatoon, Canada] (U of S) | Bayer CropScience [UK] | Kansas State Univ, Dept Plant Pathol, Manhattan, KS 66506 USA ; Partenaires INRAE | Department of Botany and Plant Sciences [Riverside] ; University of California [Riverside] (UC Riverside) ; University of California (UC)-University of California (UC) | Génétique Diversité et Ecophysiologie des Céréales (GDEC) ; Institut National de la Recherche Agronomique (INRA)-Université Blaise Pascal - Clermont-Ferrand 2 (UBP) | Graduate School of Agriculture, Kyoto University, Kyoto, Japan | Centre of the Region Haná for Biotechnological and Agricultural Research [Univ Palacký] (CRH) ; Faculty of Science [Univ Palacký] ; Palacky University Olomouc-Palacky University Olomouc-Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS) ; Czech Academy of Sciences [Prague] (CAS)-Czech Academy of Sciences [Prague] (CAS) | Centre of the Region Haná for Biotechnological and Agricultural Research ; Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS) ; Czech Academy of Sciences [Prague] (CAS)-Czech Academy of Sciences [Prague] (CAS) | Fraunhofer Institute for Intelligent Analysis and Information Systems (Fraunhofer IAIS) ; Fraunhofer (Fraunhofer-Gesellschaft) | National Research Centre Plant Biotechnology ; Partenaires INRAE | Dept Plant Pathol ; Kansas State University | Genoscope - Centre national de séquençage [Evry] (GENOSCOPE) ; Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) ; Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) | * ; Bayer CropScience [UK] | Institute of Crop Sciences of CAAS [Beijing] (ICS CAAS) ; Chinese Academy of Agricultural Sciences (CAAS) | National Institute of Agrobiological Sciences (NIAS) ; National Institute of Agrobiological Sciences | Natl Inst Agrobiol Sci ; Partenaires INRAE | JST-CREST ; Japan Science and Technology Agency | Global Institute of Food Security ; University of Saskatchewan [Saskatoon, Canada] (U of S) | School of Agriculture and Food Sciences, Australian Centre for Plant Functional Genomics ; The University of Queensland (UQ [All campuses : Brisbane, Dutton Park Gatton, Herston, St Lucia and other locations]) | Norwegian University of Life Sciences (NMBU) | Centre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences ; Norwegian University of Life Sciences (NMBU) | The Sainsbury Laboratory [Norwich] (TSL) | Genome Analysis Centre | John Innes Centre [Norwich] ; Biotechnology and Biological Sciences Research Council (BBSRC) | European Synchrotron Radiation Facility (ESRF) | Helmholtz Zentrum München = German Research Center for Environmental Health (HMGU) | MIPS/IBIS ; Helmholtz Zentrum München = German Research Center for Environmental Health (HMGU) | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] (IPK-Gatersleben) | DOE Joint Genome Institute [Walnut Creek] | United States Department of Energy | The James Hutton Institute | Inst Bioinformat & Syst Biol, Munich Informat Ctr Prot Sequences ; Helmholtz Zentrum München = German Research Center for Environmental Health (HMGU) | Unité de Mathématiques et Informatique Appliquées de Toulouse (MIAT INRA) ; Institut National de la Recherche Agronomique (INRA) | Unité de Recherche Génomique Info (URGI) ; Institut National de la Recherche Agronomique (INRA) | Institute of Plant Biology [UZH, Zürich] ; Universität Zürich [Zürich] = University of Zurich (UZH) | Fac Engn & Nat Sci ; Sabanci University [Istanbul] | Genomics Research Centre ; Consiglio per la Ricerca e Sperimentazione in Agricoltura | York University | Agriculture Victoria Research, Department of Economic Development, Jobs, Transport and Resources ; AgriBio | Centre for Comparative Genomics ; Murdoch University [Perth] | CUBE Division of Computational Systems Biology ; Universität Wien = University of Vienna | Plant Genome and Systems Biology ; Helmholtz Diabetes Center at Helmholtz Zentrum | Department of Plant Pathology ; Kansas State University | Diversity Arrays Technology Pty Ltd (DArT P/L) | Centre de Recherche de Chappes ; BIOGEMMA | Research Council of Norway [199387] | German Research Foundation (DFG) [SFB924] | German Federal Ministry of Education and Research (BMBF) | European Project: 283496,EC:FP7:INFRA,FP7-INFRASTRUCTURES-2011-2,TRANSPLANT(2011)