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Detection of in silico SSR Markers Specific to Uzun and Kırmızı Cultivars in Pistachio Texto completo
2023
Harun Karcı
In the current paper, it was aimed to detect the SSR markers that can be used in the prevention of confusion that may occur in breeding or nurseries, and directly genetically separating Uzun and Kırmızı pistachio cultivars from other commercial cultivars. A total of genotypes of 16 Pistacia vera species, one P. atlantica, one P. eurycarpa and two P. terebinthus species were obtained from the farmer's orchard in Nizip district of Gaziantep province for genetic characterization. Genetic diversity and clustering analyzes were performed with UPGMA (Unweighted Pair Group Method with Arithmetic Average) and STRUCTURE 2.3.4 programs using the scored SSR loci. Genetic relationship and population structure of genotypes were defined using common and distinct polymorphic PCR fragments. Cultivar-specific markers to be used in identifying and distinguishing the genetic structure of Uzun and Kırmızı cultivars were carried out in the current research. CUPOhBa2127 marker has the highest allele number (Na=10). In addition, 11 out of 25 SSR markers were explained as cultivar-specific SSRs that can distinguish Uzun and Kırmızı cultivars. These markers can be used directly by breeders and geneticists without any preliminary screnning of the markers. A quite serious providence will be achieved in the cost and time that will occur with the preliminary analysis, and thus, the confusion that may occur in large scale orchard establishments or nurseries will be reduced to pretty low levels with DNA analysis.
Mostrar más [+] Menos [-]Importance of Pseudomonas aeruginosa in Food Safety and Public Health Texto completo
2023
Soner Tutun | Özen Yurdakul
Pseudomonas aeruginosa (P. aeruginosa), the most pathogenic species among the pseudomonas species, is a bacterium that causes opportunistic infections resulting in significant damage to host tissues. P. aeruginosa, which is resistant to antibiotics, also causes fatal infection in human and animals. Infections caused by P. aeruginosa are difficult to treat due to its rapid proliferation in the environment and its ability to form biofilms that confer resistance to antibiotics. One of the main virulence factors of P. aeruginosa is its direct damage to host tissues, which disrupts the host’s defense mechanisms. P. aeruginosa is a food-borne pathogen often detected in various food groups such as meat, milk, fruit, vegetables, and water. In recent years, there has been a noticeable rise in food-borne contamination with P. aeruginosa. New measures are urgently needed in the treatment of patients with infections due to this agent, since P. aeruginosa can develop resistance to most antibacterials. In this review, general information about P. aeruginosa, which has gained importance for public health, will be given.
Mostrar más [+] Menos [-]Consumer’s Perspectives on Misinformation Links with the Consumption of Broiler Meat: A Case of Kandy District - Sri Lanka Texto completo
2023
Iustus Alwis | Sachini Ariyachandra | Ruvini Kamalika Mutucumarana | Ruwini Basnayake
The study described herein aimed to investigate the relationship between perceptions of hormone usage and customer preferences for broiler meat and meat products in Sri Lanka with special reference to Kandy district. A total of 460 respondents from Kandy district were interviewed using a pre-tested questionnaire. The analysis revealed that 85.9% of the respondents believes the fact that the hormones are used in broiler production. Also, 75.7% of the respondents were unaware about the fact that the hormones are totally banned from Sri Lankan broiler production. Around 71.4% believed that the hormones are still being used illegally in broiler production in Sri Lanka. The study also found that the general public (36.2%), was the main source that the respondents perceived this false information concerning hormone use. Similarly, 83.7% believes that these chemical substances create health hazards to human. 76.7% of the respondents strongly believed the fact that the adolescent girls who consume broiler meat regularly during their childhood may experience early puberty. The findings of the present study concluded that three misconceptions of (i) use of hormones to attain high growth rates in broilers (ii) hormones assumed to be present in broiler meat pose health hazards to public and (iii) frequent broiler meat consumption during childhood is accompanying with the early puberty in adolescent girls, do exists. Though the majority of the sample comprises of highly educated professionals, these misinformation were spreaded from the information generated among the general public. However stipulating a valid certification with no added hormone in broiler chicken meat will be helpful in changing the mind-set of general public.
Mostrar más [+] Menos [-]Effects of Coating with Different Doses of Boron Compound on Germination Parameters of Cotton Seeds Texto completo
2023
Mustafa Yaşar | Nurettin Baran | Yusuf Güzel Demiray | Remzi Ekinci | Yaşar Karadağ
In this study, seeds of cotton plants were coated with different boron concentrations and their effect on seedling growth was investigated. The experiment was carried out at Muş Alparslan University, Faculty of Applied Sciences, Department of Plant Production and Technologies, under laboratory and greenhouse conditions, according to the Randomized Plots Trial Design with 4 in laboratory and 3 in greenhouse replications, respectively. In the study, Di-sodium tetraborate decahydrate (Na2B4O7.10H20) (M=381.37 g mol-1) with a minimum purity of 99% boron compound have been used in different doses; 0 (control), 250, 500, 750, 1000, 1250, 1500, 1750, 2000, 2250 and 2500 mg kg-1. According to the results of the regression analysis, it was determined that as the boron dose in the application increased, the root length was positively correlated and other parameters were negatively correlated. In terms of the parameters examined, 250 mg kg-1 Kaolin+liquid K-Humate (15% HA) 400 ml kg-1 (U3) boron application under laboratory conditions showed better results, and 1000 ml kg-1 Kaolin+liquid boron application under greenhouse conditions. It was determined that the application of K-Humate (15% HA) 400 ml kg-1 (U6) promoted growth. In addition, it was found that the results were confirmed in the grouping of the relationships between applications and parameters with heat map clustering and PCA graphs. As a result, it was determined that the toxic range of boron applications applied to the seed in the cotton plant was very narrow, and that it promoted seedling development and root elongation in the U6 application, but it was concluded that the study should also be studied in field trials in order to make more decisive decisions.
Mostrar más [+] Menos [-]klık Stresinin Kestane (Castanea Sativa Mill.) Fidanlarında Yaprak Gaz Değişkenlerine ve Prolin Miktarlarına Etkisi Texto completo
2023
Fadime Beyazyüz | Şemsettin Kulaç
Küresel ısınma nedeniyle ortaya çıkan su kıtlığı ağaçların büyümesini ve gelişmesini sınırlayarak kuraklık stresine neden olmaktadır. Türkiye’de doğal olarak yetişmekte olan Fagaceae familyasına ait kestane (Castanea sativa) kuraklıktan etkilenmektedir. Bu çalışmada Türkiye’nin Akdeniz bölgesinin üç farklı popülasyonundan (Akseki, İbradı ve Selge); Ege bölgesinden (İzmir-Ovacık), Marmara bölgesinden (Bursa) ve Karadeniz bölgesinden (Düzce) toplanan C. sativa tohumlarından elde edilen fidanlar kullanılmıştır. Sera ortamında farklı sulama rejimlerine tabi tutulan üç yaşında (3+0) kestane fidanlarının kuraklık stresi altındaki yaprak gaz değişim parametreleri [net asimilasyon (fotosentez) oranı (A), stoma iletkenliği (gs), terleme miktarı (E), içsel su kullanım etkinliği (iWUE=A/gs) ve anlık bitki su kullanım etkinliği (WUE=A/E)] ve prolin birikimine etkisi araştırılmıştır. Sonuç olarak, bütün popülasyonların E, A, gs değerlerinin kontrol gruplarına göre önemli ölçüde azalmasının yanı sıra prolin birikiminin kontrol gruplarına göre arttığı gözlenmiştir. Sonuç olarak altı farklı C. sativa popülasyonlarının kuraklığa adaptasyon potansiyellerinin değişkenlik gösterdiği ancak Akdeniz popülasyonlarının kuraklığa adaptasyon potansiyellerinin daha yüksek olabileceği gözlenmiştir.
Mostrar más [+] Menos [-]The Effect of Selenium, Vitamin E, Vitamin A and Vitamin D3 Applications on Fertility in Awassi Sheep with Estrus Synchronization During the Breeding Season Texto completo
2023
Mehmet Efe | Mustafa Kemal Sarıbay | Ece Koldaş Ürer | Ayşe Merve Köse
The purpose of this study was to determine the effects of selenium, vitamin E, vitamin A, and vitamin D3 treatments on reproductive parameters in Awassi sheep fed solely dry grass and grain stubble during the breeding season with estrus synchronization. Seventy-five sheep were implanted with intravaginal sponges containing 20 mg of flugestone acetate for 9 days for estrus synchronization. On the day the sponges were inserted, the first group received an intramuscular injection of a supplement containing 200,000 IU of vitamin A, 30,000 IU of vitamin D3, and 20 mg of vitamin E, as well as a supplement containing 1 mg of sodium selenite and 60 mg of vitamin E. The second group was the control group, with no supplementary vitamin injected. On the day of sponge removal, the sheep received intramuscular injections of 500 IU PMSG and 250 mcg cloprostenol sodium in both groups. The sheep in the first group were given a second injection of the supplement on the same day that contained 20 mg of vitamin E, 30,000 IU of vitamin D3, and 200,000 IU of vitamin A. The sheep that showed signs of estrus were mated naturally after the estrus synchronization. Estrus rates were 86.11% and 85.29%, conception rates were 74.19% and 58.62%, pregnancy rates were 63.88% and 50%, lambing rates were 100% and 100%, and litter size was found to be 126.08% and 123.52% in Group I and II, respectively (P=0.858). Although there was no significant difference in the reproductive characteristics between the groups (P>0.05), Group I had a greater pregnancy rate and litter size. During the breeding season, it is believed that the regular application of vitamin and mineral supplements on a program basis in sheep fed only dry pasture and grain stubble contributed to fertility.
Mostrar más [+] Menos [-]Nodulation Potential of Annual Sweet Lupins (Lupinus spp. L.) and its Effect on Soil Nitrogen and Phosphorus in Acidic Soils of Western Amhara, Ethiopia Texto completo
2023
Likawent Yeheyis | Tesfaye Feyisa | Wondmeneh Mekonnen | Matthew Nelson | David Mcnaughton | Zelalem Yadelew | Heather Sanders
In Ethiopia livestock feed shortage and soil acidity are serious problems. In recent years sweet lupins (white and blue species) were introduced as multipurpose crops in the country. However, there is no information about their nodulation potential. This study was conducted to evaluate nodulation potential of these sweet lupins and their effect on nitrogen (N) and phosphorous (P) content of the soil. Seven lupin varieties were evaluated using factorial arrangement (seven varieties * two inoculations) in a randomized complete block design in two locations for two years. The result showed that effect of inoculation and location was not significant (P > 0.05) on biomass, seed, nodule number and soil parameters. While the effect of variety was significant (P < 0.05) on nodule parameters. Its effect on dry biomass and seed yields was also significant in either of the years. Variety and year had no effect on soil N and P contents. In the first year, blue sweet lupin entries had the highest nodule number per plant, 222 nodules. In the second year similar nodulation performance was observed among species and varieties. Soil N and P were not affected by varieties and inoculation. In addition to their yield advantage, compared to the sweet white entries, blue sweet lupin varieties had high potential in nodulation. Therefore, these introduced sweet blue lupins can be used as multipurpose crops in acidic soils of Ethiopia.
Mostrar más [+] Menos [-]Exploration of Two Cucurbitaceae Fruit (Muskmelon and Watermelon) Seeds for Presence of Phytochemicals, and Antioxidant and Antimicrobial Activities Texto completo
2023
Ashiq Hussain | Saima Akram | Tahira Siddique | Shazia Yaqub | Haya Fatima | Muhammad Rehan Arif | Atif Ali | Anjum Shehzad
Cucurbitaceae family fruits, especially melons, offers significant quantities of minerals carotenoids and phenolic compounds, contributing to their antioxidant activity. However, seeds of these fruits are usually discarded as waste by products. In current study, seeds of watermelon (Citrullus lanatus) and muskmelon (Cucumis melo) were separated, dried, grounded and extracted, with 70% ethanol, to investigate total phenolic content (TPC), flavonoid content (TFC), carotenoid content (TC) content, and total antioxidant activity (TAA). Further, antimicrobial activities of these extracts were tested against selected bacterial and fungus strains. Results showed that extracts of both cucurbits presented significant amounts of phytochemicals, with higher quantities presented by watermelon seeds. In watermelon seeds, TPC were found 156.50 mg/GAE 100 g, TFC 56.78 mg CE/100 g, TC 36.65 mg/100 g, and TAA 71%, and these amounts were significantly higher than those found in muskmelon seeds. Antimicrobial study results showed that extracts of both seeds exhibited significant zone of inhibitions against three bacterial and three fungal species, and these values were very comparable to the reference antimicrobial drug used, Ciprofloxacin. Findings of current research work provided significant grounds for presence of phytochemical bioactives in two melon fruits seeds, providing the basis for extraction and utilization of these bioactives, through processing and fortification different pharma foods.
Mostrar más [+] Menos [-]Phylogenetic Analysis and Lipoxygenase (LOX) Gene Family Variation in The Pistachio Texto completo
2023
Elmira Ziya Motalebipour | Akbar Pirestani
Lipoxygenases (LOX) gene family is a type of nonheme iron-containing dioxygenases, which has a very important aspect in plant development and fruit quality. LOX gene, which is responsible for lipid oxidation, the main role for the biosynthesis pathway of unsaturated fatty acids. Although some studies have investigated the LOX gene family in several species including arabidopsis, soybean, peanut and apple, there is no information from Pistachio; and the phylogeny of this gene family in the Pistacia genus is still not determined. In this study, Arabidopsis thaliana LOX1 gene (NCBI Reference Sequence: NM_104376.3) was selected and used as a query sequence for performing a BLASTN search. Among all sequence query which was found by NCBI platform, 9 sequences were selected for further analysis. Phylogenetic tree of full-length LOX gene sequences from the Pistacia genus was constructed using the Maximum Likelihood method with MEGA software. By using phylogenic analysis, we identified variations in gene structure and revealed the phylogenetic evolutionary relationship of this gene family. Additionally, this may serve as a reference value for assessing the genetic relationships among various LOX genes in Pistacia genus species. This variations provides us the possibility the design the primer to achieve us to find the exact LOX gene in Pistacia genus and future research on the evolutionary history and transgenic research on LOX genes.
Mostrar más [+] Menos [-]The Rational Use of Oxalic Acid Against to “Varroa Destructor”; Regional Scale Pilot Scheme Texto completo
2023
Fatih Yılmaz | Sedat Sevin | Gökhan Akdeniz | Seyit Hasan Öztürk | Ahmet Kuvancı | Hasan Ese | Mücahit Buldağ | Gülden Ayvaz Baykal
Varroa destructor mite poses a serious problem for the future of bee populations around the world. Today, there are many commercial drugs with the same and different active ingredients on the market to chemically control over of Varroa destructor. More frequent chemical applications for against Varroa destructor increases stress resilience, colony losses, loss of yield and residue problems in bee products. The scope of this project is aimed to determine the appropriate control method of Varroa by investigating the efficiency values of the evaporation and dropping methods of Oxalic acid. Experimental area were chosen three different apiaries. 28 colonies were determined in each apiary and equalization studies (area with brood, number of bees with bees, age of queen bees, honey, pollen, etc.) were carried out in these colonies. The determined colonies were randomly divided into 4 groups as 7 colonies. The first group is the control group, the second group is applying 2 g of oxalic acid by vaporizing, the third group is 4% oxalic acid 5 ml of sugar syrup (1:1) is dropped between the frames, and in the fourth group, the fight against a drug that is determined by the beekeeper in the market without interfering with the beekeeper. In order to evaluate the data, samples were taken for four periods, before and after spraying in spring and autumn. While the varroa measurements in the group of syrup, vapor and spraying were found to be statistically less than the control group, the syrup, vapor and spraying groups were statistically similar in terms of varroa measurements. Oxalic acid syrup application showed higher efficiency in spring and autumn than vapor application. There is no statistically difference between both two-application method reveals that it can be used as an effective and safe alternative to chemical control against varroa.
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