The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species
2021
Opgenoorth, Lars | Dauphin, Benjamin | Benavides, Raquel | Heer, Katrin | Alizoti, Paraskevi | Martínez-Sancho, Elisabet | Alía, Ricardo | Ambrosio, Olivier | Audrey, Albet | Auñón, Francisco | Avanzi, Camilla | Avramidou, Evangelia | Bagnoli, Francesca | Barbas, Evangelos | Bastias, Cristina | Bastien, Catherine | Ballesteros, Eduardo | Beffa, Giorgia | Bernier, Frédéric | Bignalet, Henri | Bodineau, Guillaume | Bouic, Damien | Brodbeck, Sabine | Brunetto, William | Buchovska, Jurata | Buy, Melanie | Cabanillas-Saldaña, Ana M | Carvalho, Bárbara | Cheval, Nicolas | Climent, José M | Correard, Marianne | Cremer, Eva | Danusevičius, Darius | Caño, Fernando Del | Denou, Jean-Luc | Gerardi, Nicolas Di | Dokhelar, Bernard | Ducousso, Alexis | Nilsen, Anne Eskild | Farsakoglou, Anna-Maria | Fonti, Patrick | Ganopoulos, Ioannis | Barrio, José M García Del | Gilg, Olivier | González-Martínez, Santiago C | Graf, René | Gray, Alan | Grivet, Delphine | Gugerli, Felix | Hartleitner, Christoph | Hollenbach, Enja | Hurel, Agathe | Issehut, Bernard | Jean, Florence | Jorge, Veronique | Jouineau, Arnaud | Kappner, Jan-Philipp | Kärkkäinen, Katri | Kesälahti, Robert | Knutzen, Florian | Kujala, Sonja T | Kumpula, Timo A | Labriola, Mariaceleste | Lalanne, Celine | Lambertz, Johannes | Lascoux, Martin | Lejeune, Vincent | Le-Provost, Gregoire | Levillain, Joseph | Liesebach, Mirko | López-Quiroga, David | Meier, Benjamin | Malliarou, Ermioni | Marchon, Jérémy | Mariotte, Nicolas | Mas, Antonio | Matesanz, Silvia | Meischner, Helge | Michotey, Célia | Milesi, Pascal | Morganti, Sandro | Nievergelt, Daniel | Notivol, Eduardo | Ostreng, Geir | Pakull, Birte | Perry, Annika | Piotti, Andrea | Plomion, Christophe | Poinot, Nicolas | Pringarbe, Mehdi | Puzos, Luc | Pyhäjärvi, Tanja | Raffin, Annie | Ramírez-Valiente, José A | Rellstab, Christian | Remi, Dourthe | Richter, Sebastian | Robledo-Arnuncio, Juan J | Segundo, Sergio San | Savolainen, Outi | Schueler, Silvio | Schneck, Volker | Scotti, Ivan | Semerikov, Vladimir | Slámová, Lenka | Sønstebø, Jørn Henrik | Spanu, Ilaria | Thevenet, Jean | Tollefsrud, Mari Mette | Turion, Norbert | Vendramin, Giovanni Giuseppe | Villar, Marc | Arx, Georg Von | Westin, Johan | Fady, Bruno | Myking, Tor | Valladares, Fernando | Aravanopoulos, Filippos A | Cavers, Stephen | Swiss Federal Institute for Forest, Snow and Landscape Research WSL | Philipps Universität Marburg = Philipps University of Marburg | Department of Biogeography and Global Change ; Museo Nacional de Ciencias Naturales [Madrid] (MNCN) ; Consejo Superior de Investigaciones Cientificas [España] = Spanish National Research Council [Spain] (CSIC)-Consejo Superior de Investigaciones Cientificas [España] = Spanish National Research Council [Spain] (CSIC) | Aristotle University of Thessaloniki | Department of Forest Ecology and Genetics ; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria = National Institute for Agricultural and Food Research and Technology (INIA) | Ecologie des Forêts Méditerranéennes (URFM) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Unité expérimentale Forêt Pierroton (UEFP) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Istituto di Bioscienze e BioRisorse = Institute of Biosciences and Bioresources (IBBR CNR) ; National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR) | Centre d’Ecologie Fonctionnelle et Evolutive (CEFE) ; Université Paul-Valéry - Montpellier 3 (UPVM)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Occitanie])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Biologie intégrée pour la valorisation de la diversité des Arbres et de la Forêt (BioForA) ; Office National des Forêts (ONF)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Génétique et Biomasse Forestières ORléans (GBFOR) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Vytautas Magnus University - Vytauto Didziojo Universitetas (VDU) | Unité de Recherche Génomique Info (URGI) ; Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Gobierno de Aragon ; Centro de Investigación y Tecnología Agroalimentaria de Aragón (CITA) | Unité Expérimentale Entomologie et Forêt Méditerranéenne (UEFM) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Bavarian Office for Forest Seeding and Planting ; Partenaires INRAE | Biodiversité, Gènes & Communautés (BioGeCo) ; Université de Bordeaux (UB)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Norsk institutt for bioøkonomi=Norwegian Institute of Bioeconomy Research (NIBIO) | Centre for Ecology & Hydrology - Bush Estate ; Natural Environment Research Council (NERC) | LIECO GmbH & Co KG ; Partenaires INRAE | Natural Resources Institute Finland (LUKE) | University of Oulu [Finland] = Oulun yliopisto [Suomi] = Université d'Oulu [Finlande] | Department of Ecology and Genetics [Uppsala] (EBC) ; Uppsala University | SILVA (SILVA) ; AgroParisTech-Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Thunen Institute of Forest Ecosystems ; Johann Heinrich von Thünen-Institut = Thünen Institute | Universidad Rey Juan Carlos = Rey Juan Carlos University (URJC) | Centro de Investigación y Tecnología Agroalimentaria de Aragón (CITA) | Austrian Research Centre for Forests (BFW) | Institute of Plant and Animal Ecology ; Ural Branch of Russian Academy of Sciences (UB RAS) | Skogforsk - Forestry Research Institute of Sweden | Swiss Secretariat for Education, Research and Innovation (SERI) 6.0032 | ANR-11-INBS-0013,IFB (ex Renabi-IFB),Institut français de bioinformatique(2011) | European Project: 676876,H2020-SFS-2014-2015,H2020-SFS-2015-2,GenTree(2016)
International audience
Afficher plus [+] Moins [-]anglais. Progress in the field of evolutionary forest ecology has been hampered by the huge challenge of phenotyping trees across their ranges in their natural environments, and the limitation in high-resolution environmental information;The GenTree Platform contains phenotypic and environmental data from 4,959 trees from 12 ecologically and economically important European forest tree species: Abies alba Mill. (silver fir), Betula pendula Roth. (silver birch), Fagus sylvatica L. (European beech), Picea abies (L.) H. Karst (Norway spruce), Pinus cembra L. (Swiss stone pine), Pinus halepensis Mill. (Aleppo pine), Pinus nigra Arnold (European black pine), Pinus pinaster Aiton (maritime pine), Pinus sylvestris L. (Scots pine), Populus nigra L. (European black poplar), Taxus baccata L. (English yew), and Quercus petraea (Matt.) Liebl. (sessile oak). Phenotypic (height, diameter at breast height, crown size, bark thickness, biomass, straightness, forking, branch angle, fructification), regeneration, environmental in situ measurements (soil depth, vegetation cover, competition indices), and environmental modeling data extracted by using bilinear interpolation accounting for surrounding conditions of each tree (precipitation, temperature, insolation, drought indices) were obtained from trees in 194 sites covering the species’ geographic ranges and reflecting local environmental gradients. The GenTree Platform is a new resource for investigating ecological and evolutionary processes in forest trees. The coherent phenotyping and environmental characterization across 12 species in their European ranges allow for a wide range of analyses from forest ecologists, conservationists, and macro-ecologists. Also, the data here presented can be linked to the GenTree Dendroecological collection, the GenTree Leaf Trait collection, and the GenTree Genomic collection presented elsewhere, which together build the largest evolutionary forest ecology data collection available.
Afficher plus [+] Moins [-]Mots clés AGROVOC
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