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Molecular analysis of virulence genes stx1, stx2, eaeA and hlyA in Escherichia coli isolated from cloacal samples in wild pigeons (Columba livia) and determination of their antibiotic resistance Texte intégral
2017
Mohammadzadeh, Abdolmajid | Mahmoodi, Pezhman | Ashrafi tamai, Iradj | Sharifi, Aram
BACKGROUND: Pigeons can be carriers for some human and animal pathogens, one of the most important of which is Escherichia coli. OBJECTIVES: This bacterium is responsible for outbreaks of many human diseases. Our objective was to determine the prevalence of Escherichia coli in cloacal area of pigeons in Tehran city (Iran), and determine the prevalence of some virulence genes and also antibiotics resistance pattern of isolates. METHODS: Altogether 117 samples of pigeon feces were collected from cloacal swab. The identification of bacteria was done by culture on differential culture media. Then antibiotic susceptibility test was performed by disk diffusion method. Isolates were tested for the presence of virulence genes stx1, stx2, eae and hlyA using multiplex polymerase chain reaction. RESULTS: Escherichia coli were detected in 82.9% of 277 samples from pigeons. Sulfamethoxazole was the least effective drug (85.6% resistance), followed by tetracycline (83.5%). No resistance was detected to co-amoxiclav. The prevalence of stx1, stx2 and eaeA is 3.09%, 6.18% and 2.06% respectively and hlyA was not found in any of isolates. CONCLUSIONS: The frequency of stx1 and stx2 distribution in animals and birds is not well understood as yet. Due to the close relationship of humans with birds like pigeons and presence of STEC strains in apparently healthy birds, necessitates considering precise regulations to restrict and prevent the prevalence of this life- threatening virus in Iran.
Afficher plus [+] Moins [-]Identifying Corynebacterium pseudotuberculosis in Sheep of Kurdistan Province in Iran by Culture and Polymerase Chain Reaction and Determining the Antibiotic Resistance of its Isolates Texte intégral
2024
Ataei Kileh Golan, Jamil | Derakhshan, Safora | Sharifi, Aram | Nayeri Fasaei, Bahar | Zahraei Salehi, Taghi
BACKGROUND: Corynebacterium pseudotuberculosis is the etiological agent of caseous lymphadenitis (CLA), a chronic and very common disease in sheep and goats, which can lead to severe economic losses in the livestock industry.OBJECTIVES: This study aims to investigate the prevalence of CLA in sheep in Kurdistan province of Iran using phenotypic and molecular methods, and assess the antibiotic resistance of isolated Corynebacterium pseudotuberculosis.METHODS: In this study, from September to March 2022, 270 samples of skin abscesses were collected from sheep in livestock farms of Kurdistan province. Immediately, using the cold chain system, the samples were transferred to the microbiology laboratory of the Faculty of Medicine at Kurdistan University of Medical Sciences. Identification of isolates was done using biochemical tests and polymerase chain reaction (PCR) method. The antibiotic resistance of the isolates was examined using the Kirby-Bauer disk diffusion method.RESULTS: Based on biochemical tests, out of 270 samples, 82 suspected to have Corynebacterium pseudotuberculosis. Out 82 samples, the presence of bacteria was confirmed in 76 samples by the PCR. The antibiotic sensitivity test showed that the isolates had high sensitivity to doxycycline and ceftriaxone and high resistance to streptomycin and kanamycin.CONCLUSIONS: The CLA has a high prevalence in sheep in Kurdistan province. According to high resistance rate of Corynebacterium pseudotuberculosis to streptomycin and kanamycin, it recommended to avoid treatment of CLA cases with these antibiotics.
Afficher plus [+] Moins [-]Climatic and regional antibiotic resistance patterns of Staphylococcus aureus in South African dairy herds Texte intégral
2019
Karzis, Joanne | Petzer, Inge-Marie | Donkin, Edward F. | Naidoo, Vinny | Etter, Eric M. C. | University of Pretoria [South Africa] | Animal, Santé, Territoires, Risques et Ecosystèmes (UMR ASTRE) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA) | Département Systèmes Biologiques (Cirad-BIOS) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)
International audience | South Africa is a large country of approximately 1.22 million km(2), made up of nine provinces with three climatic zones. Farming in the country is mostly defined by regional differences. Of the different organisms isolated from milk samples of dairy cows, Staphylococcus aureus poses a challenge to maintain udder health and wholesome dairy products for human consumption. Antibiotic resistant bacteria are therefore a potential health hazard. The objective of this study was to investigate the seasonal and regional relationships of antibiotic resistance of S. aureus, of which little is known. This study was undertaken to evaluate a data set of 3410 S. aureus isolates, taken from milk samples with a somatic cell count of > 400 000 cells/mL from commercial dairy herds. These isolates were tested for antimicrobial susceptibility using the Kirby Bauer method for ampicillin, cloxacillin, penicillin G, clindamycin, oxy-tetracycline, cephalexin, cefuroxime and tylosin. The samples were from 830 dairy herds, out of the estimated 2000 commercial dairy herds in South Africa. All the antibiotics tested, except for cephalosporins, showed a predicted prevalence of resistance of above 50% in most provinces, which is a concern. The lowest prevalence of resistance to the majority of the categories of antibiotics tested was present in KwaZulu-Natal during spring. The cephalosporins had the lowest levels of prevalence of bacterial resistance in Gauteng during winter. Resistance patterns of S. aureus to the eight antibiotics varied in the different seasons and provinces, possibly because of different weather conditions, and the action and spectrum of antibiotics.
Afficher plus [+] Moins [-]Prevalence of antibiotic-resistant bacteria amongst dogs in Africa: A meta-analysis review Texte intégral
2022
Yaovi,Ayaovi B. | Sessou,Philippe | Tonouhewa,Aretas B.N. | Hounmanou,Gildas Y.M. | Thomson,Deborah | Pelle,Roger | Farougou,Souaïbou | Mitra,Arindam
Prevalence of antibiotic-resistant bacteria amongst dogs in Africa: A meta-analysis review Texte intégral
2022
Yaovi,Ayaovi B. | Sessou,Philippe | Tonouhewa,Aretas B.N. | Hounmanou,Gildas Y.M. | Thomson,Deborah | Pelle,Roger | Farougou,Souaïbou | Mitra,Arindam
Antimicrobial resistance (AMR) is a global public health threat for both human and veterinary medicine. Increasing evidence suggests that animals are important sources of AMR to humans; however, most of these studies focus on production animals. In order to determine the pattern of AMR in pets, mainly in dogs in Africa, a meta-analysis was performed with AMR studies conducted in African countries and published between January 2000 and January 2021 in four databases: Medline (PubMed), Scopus, Cab abstract and Google Scholar. Seven bacterial strains, namely Staphylococcus aureus, Escherichia coli, Salmonella spp., Pseudomonas aeruginosa, Streptococcus pyogenes, coagulase-negative Staphylococcus (SNC) and Staphylococcus pseudintermedius were included in this study. A total of 18 out of 234 indexed articles met the study criteria. The results revealed that multiple bacteria were resistant to various commonly used antibiotics including enrofloxacin, ciprofloxacin, gentamicin, amoxicillin, clavulanic acid, cotrimoxazole, streptomycin, tetracycline and chloramphenicol. Concerning multidrug resistance, E. coli strains came first with the highest prevalence of 98%, followed by P. aeroginosa (92%) and Salmonella spp. (53%). In contrast, the overall prevalence of multidrug resistance was low for S. aureus (18%) and S. pseudintermedius (25%). It is therefore urgent to find, as soon as possible, alternatives to replace these antibiotics, which have become ineffective in controlling these bacteria in dogs in Africa. Moreover, further metagenomic studies are needed to describe the full resistome and mobilome in dogs regardless of the bacteria.
Afficher plus [+] Moins [-]Prevalence of antibiotic-resistant bacteria amongst dogs in Africa: A meta-analysis review Texte intégral
2022
Ayaovi B. Yaovi | Philippe Sessou | Aretas B.N. Tonouhewa | Gildas Y.M. Hounmanou | Deborah Thomson | Roger Pelle | Souaïbou Farougou | Arindam Mitra
Antimicrobial resistance (AMR) is a global public health threat for both human and veterinary medicine. Increasing evidence suggests that animals are important sources of AMR to humans; however, most of these studies focus on production animals. In order to determine the pattern of AMR in pets, mainly in dogs in Africa, a meta-analysis was performed with AMR studies conducted in African countries and published between January 2000 and January 2021 in four databases: Medline (PubMed), Scopus, Cab abstract and Google Scholar. Seven bacterial strains, namely Staphylococcus aureus, Escherichia coli, Salmonella spp., Pseudomonas aeruginosa, Streptococcus pyogenes, coagulase-negative Staphylococcus (SNC) and Staphylococcus pseudintermedius were included in this study. A total of 18 out of 234 indexed articles met the study criteria. The results revealed that multiple bacteria were resistant to various commonly used antibiotics including enrofloxacin, ciprofloxacin, gentamicin, amoxicillin, clavulanic acid, cotrimoxazole, streptomycin, tetracycline and chloramphenicol. Concerning multidrug resistance, E. coli strains came first with the highest prevalence of 98%, followed by P. aeroginosa (92%) and Salmonella spp. (53%). In contrast, the overall prevalence of multidrug resistance was low for S. aureus (18%) and S. pseudintermedius (25%). It is therefore urgent to find, as soon as possible, alternatives to replace these antibiotics, which have become ineffective in controlling these bacteria in dogs in Africa. Moreover, further metagenomic studies are needed to describe the full resistome and mobilome in dogs regardless of the bacteria.
Afficher plus [+] Moins [-]Prevalence of antibiotic-resistant bacteria amongst dogs in Africa: A meta-analysis review Texte intégral
2022
Yaovi, Ayaovi B. | Sessou, Philippe | Tonouhewa, Aretas B.N. | Hounmanou, Gildas Y.M. | Thomson, Deborah | Pellé, Roger | Farougou, Souaïbou | Mitra, Arindam
Antimicrobial resistance (AMR) is a global public health threat for both human and veterinary medicine. Increasing evidence suggests that animals are important sources of AMR to humans; however, most of these studies focus on production animals. In order to determine the pattern of AMR in pets, mainly in dogs in Africa, a meta-analysis was performed with AMR studies conducted in African countries and published between January 2000 and January 2021 in four databases: Medline (PubMed), Scopus, Cab abstract and Google Scholar. Seven bacterial strains, namely Staphylococcus aureus, Escherichia coli, Salmonella spp., Pseudomonas aeruginosa, Streptococcus pyogenes, coagulase-negative Staphylococcus (SNC) and Staphylococcus pseudintermedius were included in this study. A total of 18 out of 234 indexed articles met the study criteria. The results revealed that multiple bacteria were resistant to various commonly used antibiotics including enrofloxacin, ciprofloxacin, gentamicin, amoxicillin, clavulanic acid, cotrimoxazole, streptomycin, tetracycline and chloramphenicol. Concerning multidrug resistance, E. coli strains came first with the highest prevalence of 98%, followed by P. aeroginosa (92%) and Salmonella spp. (53%). In contrast, the overall prevalence of multidrug resistance was low for S. aureus (18%) and S. pseudintermedius (25%). It is therefore urgent to find, as soon as possible, alternatives to replace these antibiotics, which have become ineffective in controlling these bacteria in dogs in Africa. Moreover, further metagenomic studies are needed to describe the full resistome and mobilome in dogs regardless of the bacteria.
Afficher plus [+] Moins [-]Antimicrobial resistance of Enterococcus species isolated from wild mammals in Aragón, Spain Texte intégral
2022
García Leticia Alcalá | Torres Carmen | López Antonio Rezusta | Rodríguez Carmelo Ortega | Valencia Carmen Simón
Antimicrobial resistance is currently one of the major public health threats. In order to prevent its spread, the WHO, OIE and FAO have formed an alliance to promote the study of antibiotic resistance evolution in human, animal and environmental bacteria posing a public health threat; however, the studies performed in wild animals are scarce so far. The main objective of this study was to assess the antibiotic resistance of Enterococcus spp. isolated from wild mammals in Aragón, Spain.
Afficher plus [+] Moins [-]Occurrence and antimicrobial resistance of enterococci isolated from goat’s milk Texte intégral
2021
Gołaś-Prądzyńska, Marlena | Rola, Jolanta G.
Occurrence and antimicrobial resistance of enterococci isolated from goat’s milk Texte intégral
2021
Gołaś-Prądzyńska, Marlena | Rola, Jolanta G.
Enterococci are widespread, being part of the bacterial flora of humans and animals. The food chain can be therefore considered as the main route of transmission of antibiotic resistant bacteria between the animal and human populations. Milk in particular represents a source from which resistant bacteria can enter the human food chain. The aim of the study was to determine the occurrence and resistance to antimicrobial agents of Enterococcus spp. strains isolated from raw goat’s milk samples. A total of 207 goat’s milk samples were collected. Samples were cultivated on selective media and confirmed as E. faecium or E. faecalis and screened for selected resistance genes by PCR. Drug susceptibility determination was performed by microdilution on Sensititre EU Surveillance Enterococcus EUVENC Antimicrobial Susceptibility Testing (AST) Plates and Sensititre US National Antimicrobial Resistance Monitoring System Gram Positive CMV3AGPF AST Plates. Enterococcal strains totalling 196 were isolated, of which 40.8% were E. faecalis and 15.3% were E. faecium. All tested isolates were susceptible to linezolid, penicillin and tigecycline. For most other antimicrobials the prevalence of resistance was 0.5–6.6% while high prevalence of quinupristin/dalfopristin (51.5%), tetracycline (30%) and lincomycin (52%) resistance was observed. This study affords better knowledge concerning the safety of raw goat’s milk in terms of the enterococci possible to isolate from this foodstuff. It seems that enterococci in milk are still mostly susceptible to antimicrobials of major concern as multiply resisted drugs, such as gentamycin and vancomycin. However, the presence of multi-resistant strains in goat milk is cause for apprehension.
Afficher plus [+] Moins [-]Occurrence and antimicrobial resistance of enterococci isolated from goat’s milk Texte intégral
2021
Gołaś-Prądzyńska Marlena | Rola Jolanta G.
Enterococci are widespread, being part of the bacterial flora of humans and animals. The food chain can be therefore considered as the main route of transmission of antibiotic resistant bacteria between the animal and human populations. Milk in particular represents a source from which resistant bacteria can enter the human food chain. The aim of the study was to determine the occurrence and resistance to antimicrobial agents of Enterococcus spp. strains isolated from raw goat’s milk samples.
Afficher plus [+] Moins [-]Microbiological safety of food of animal origin from organic farms Texte intégral
2021
Sosnowski, Maciej | Osek, Jacek
Microbiological safety of food of animal origin from organic farms Texte intégral
2021
Sosnowski, Maciej | Osek, Jacek
The organic food sector and consumer interest in organic products are growing continuously. The safety and quality of such products must be at least equal to those of conventional equivalents, but attaining the same standards requires overcoming a particular problem identified in organic food production systems: the occurrence of bacterial pathogens such as Salmonella, Campylobacter, Listeria monocytogenes, Staphylococcus aureus and pathogenic Escherichia coli. These food-borne microorganisms were detected in the production environments of such food. The prevalence of pathogenic bacteria in organic livestock and products may be higher, but may also be the same as or lower than in like material from conventional farms. Furthermore, the incidence of antimicrobial-resistant bacteria was more often detected in conventional than in organic production. The aim of this review was to present the recent information on the microbiological safety of food of animal origin produced from raw materials from organic farms.
Afficher plus [+] Moins [-]Microbiological safety of food of animal origin from organic farms Texte intégral
2021
Sosnowski Maciej | Osek Jacek
The organic food sector and consumer interest in organic products are growing continuously. The safety and quality of such products must be at least equal to those of conventional equivalents, but attaining the same standards requires overcoming a particular problem identified in organic food production systems: the occurrence of bacterial pathogens such as Salmonella, Campylobacter, Listeria monocytogenes, Staphylococcus aureus and pathogenic Escherichia coli. These food-borne microorganisms were detected in the production environments of such food. The prevalence of pathogenic bacteria in organic livestock and products may be higher, but may also be the same as or lower than in like material from conventional farms. Furthermore, the incidence of antimicrobial-resistant bacteria was more often detected in conventional than in organic production. The aim of this review was to present the recent information on the microbiological safety of food of animal origin produced from raw materials from organic farms.
Afficher plus [+] Moins [-]Prevalence and characterisation of class 1 and 2 integrons in multi-drug resistant Staphylococcus aureus isolates from pig farms in Chongqing, China Texte intégral
2020
Ye Chao | Hou Fengqing | Xu Dongyi | Huang Qingyuan | Chen Xia | Zeng Zheng | Peng Yuanyi | Fang Rendong
Prevalence and characterisation of class 1 and 2 integrons in multi-drug resistant Staphylococcus aureus isolates from pig farms in Chongqing, China Texte intégral
2020
Ye Chao | Hou Fengqing | Xu Dongyi | Huang Qingyuan | Chen Xia | Zeng Zheng | Peng Yuanyi | Fang Rendong
Integrons are mobile DNA elements that allow for acquisition and dissemination of antibiotic-resistance genes among pig farm-derived bacteria. Limited information is available on integrons of Staphylococcus aureus from pig farms. The aim of this study was to characterise and investigate the prevalence of class 1 and 2 integrons in multi-drug resistant (MDR) S. aureus isolates from pig farms.
Afficher plus [+] Moins [-]Prevalence and characterisation of class 1 and 2 integrons in multi-drug resistant Staphylococcus aureus isolates from pig farms in Chongqing, China Texte intégral
2020
Ye, Chao | Hou, Fengqing | Xu, Dongyi | Huang, Qingyuan | Chen, Xia | Zeng, Zheng | Peng, Yuanyi | Fang, Rendong
Integrons are mobile DNA elements that allow for acquisition and dissemination of antibiotic-resistance genes among pig farm-derived bacteria. Limited information is available on integrons of Staphylococcus aureus from pig farms. The aim of this study was to characterise and investigate the prevalence of class 1 and 2 integrons in multi-drug resistant (MDR) S. aureus isolates from pig farms. A total of 724 swabs were collected from 12 pig farms in Chongqing, China, and examined by conventional microbial and molecular methods. In total, 68 isolates were S. aureus, 57 of which were methicillin resistant (MRSA). All 68 isolates were MDR strains and carried integrons, of which 88.2% (60/68) harboured both class 1 and 2. In addition, 85.3% (58/68) of the class 2 integron-positive isolates carried the β-lactam resistance gene (blaTEM₋₁), and 66.7% (40/60) of the class 1 integron–positive isolates carried the aadA1c, aadA1 or dfrA1 gene for respective streptomycin and spectinomycin or trimethoprim resistance. Class 1 and 2 integrons are common among the pig farm-derived S. aureus isolates. On account of their significance for public health, the prevalence of the integrons and their associated resistance genes in pig farm-derived S. aureus isolates should be paid special attention.
Afficher plus [+] Moins [-]Colistin resistance of non-pathogenic strains of Escherichia coli occurring as natural intestinal flora in broiler chickens treated and not treated with colistin sulphate Texte intégral
2020
Majewski, Michał | Łukomska, Anna | Wilczyński, Jarosław | Wystalska, Danuta | Racewicz, Przemysław | Nowacka-Woszuk, Joanna | Pszczola, Marcin | Anusz, Krzysztof
Colistin resistance of non-pathogenic strains of Escherichia coli occurring as natural intestinal flora in broiler chickens treated and not treated with colistin sulphate Texte intégral
2020
Majewski, Michał | Łukomska, Anna | Wilczyński, Jarosław | Wystalska, Danuta | Racewicz, Przemysław | Nowacka-Woszuk, Joanna | Pszczola, Marcin | Anusz, Krzysztof
A significant threat to public health is presented by antibiotic-resistant strains of bacteria, selective pressure on which results from antibiotic use. Colistin is an antibiotic commonly used in veterinary medicine, but also one of last resort in human medicine. Since the 2015 discovery in China of the mcr-1 gene encoding colistin resistance in Enterobacteriaceae, other countries have noted its presence. This study was to find the mcr-1 gene prevalence in E. coli isolated from poultry slaughtered in Poland. Cloacal swabs were taken from December 2017 to October 2018 from broiler chickens in three regions. The samples (n = 158) were grouped as flocks treated with colistin sulphate (n = 87) and those not treated (n = 71). Resistance to antimicrobials commonly used in poultry was evaluated by minimum inhibitory concentration. The presence of the mcr-1 gene was confirmed by PCR. Isolates containing the mcr-1 gene were yielded by 11.27% of the samples from not treated flocks and 19.54% of those from treated flocks, but no statistically significant difference in the prevalence of the gene was seen between the groups. The results clearly preclude intensification of selective pressure for colistin resistance due to colistin sulphate treatment because they show that the avian gastrointestinal tract was already inhabited by colistin-resistant E. coli by the time the chickens came to the poultry house.
Afficher plus [+] Moins [-]Colistin resistance of non-pathogenic strains of Escherichia coli occurring as natural intestinal flora in broiler chickens treated and not treated with colistin sulphate Texte intégral
2020
Majewski Michał | Łukomska Anna | Wilczyński Jarosław | Wystalska Danuta | Racewicz Przemysław | Nowacka-Woszuk Joanna | Pszczola Marcin | Anusz Krzysztof
A significant threat to public health is presented by antibiotic-resistant strains of bacteria, selective pressure on which results from antibiotic use. Colistin is an antibiotic commonly used in veterinary medicine, but also one of last resort in human medicine. Since the 2015 discovery in China of the mcr-1 gene encoding colistin resistance in Enterobacteriaceae, other countries have noted its presence. This study was to find the mcr-1 gene prevalence in E. coli isolated from poultry slaughtered in Poland.
Afficher plus [+] Moins [-]Genetic relationship of Salmonella isolates found in subcutaneous abscesses in leopard geckos (Eublepharis macularius) Texte intégral
2020
Zając, Magdalena | Maluta, Aleksandra | Wasyl, Dariusz | Skarżyńska, Magdalena | Lalak, Anna | Samcik, Ilona | Kwit, Renata | Szulowski, Krzysztof
Genetic relationship of Salmonella isolates found in subcutaneous abscesses in leopard geckos (Eublepharis macularius) Texte intégral
2020
Zając, Magdalena | Maluta, Aleksandra | Wasyl, Dariusz | Skarżyńska, Magdalena | Lalak, Anna | Samcik, Ilona | Kwit, Renata | Szulowski, Krzysztof
The article describes the occurrence and phylogenetic relationship of Salmonella isolates found in subcutaneous abscesses of leopard geckos. The aim of the study was to determine the cause of the abscesses and to characterise isolated Salmonella strains. Samples of abscesses from five animals and internal organs (lungs, liver, and gut) of three of them were tested for Salmonella according to the PN-EN ISO 6579:2002/A1:2007 standard. The antimicrobial resistance was evaluated by minimal inhibitory concentrations and the genetic similarity of the isolates was assessed with pulsed field gel electrophoresis (PFGE). In total, seventeen Salmonella isolates belonging to five different serovars were found to be susceptible to all tested antimicrobials except streptomycin. The serovars were S. Hadar, S. Fluntern, S. Tennessee, S. enterica subsp. salamae 55:k:z₃₉, and S. Kentucky. Up to three serovars from different organs were isolated from the same individual. In two geckos, Salmonella were detected in the lungs. In three serovars, XbaI-PFGE typing revealed indistinguishable isolates from organs and abscesses. Multiple Salmonella serovars might be involved in abscess formation and infections. The occurrence of the same PFGE profiles of the isolates may testify to the role of opportunistic organisms in causing infection.
Afficher plus [+] Moins [-]Genetic relationship of Salmonella isolates found in subcutaneous abscesses in leopard geckos (Eublepharis macularius) Texte intégral
2020
Zając Magdalena | Maluta Aleksandra | Wasyl Dariusz | Skarżyńska Magdalena | Lalak Anna | Samcik Ilona | Kwit Renata | Szulowski Krzysztof
The article describes the occurrence and phylogenetic relationship of Salmonella isolates found in subcutaneous abscesses of leopard geckos. The aim of the study was to determine the cause of the abscesses and to characterise isolated Salmonella strains.
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