Malin sheep is the indigenous sheep breed of Malaysia and mainlykept for meat production. A total of 48 individuals from the National Institute of Veterinary Biodiversity (NIVB) in Jerantut,Pahang were used. The objective of this study was to assess the genetic diversity in the Malin using microsatellite markers.Eleven microsatellite loci were successfully amplified in 48 Malin sheep. All loci were polymorphic. A total of 66 alleles were detected. The number of observed alleles per locus varied from 12 to 21, with mean observed number alleles per locus of15.18±4.58. The observed heterozygosity and expected heterozygosity were 0.0189±0.01 and 0.8989±0.01, respectively. The mean polymorphic information content (PIC) value was 0.8970±0.01, indicating that the used markers were highly informative and could be used in parentage identification. Tests of genotype frequencies for deviation from the Hardy-Weinberg equilibrium (HWE), at each locus revealed depature from HWE due to loss in heterozygotes by high levels of inbreeding. The average inbreeding value for the 11 markers investigated was0.9797±0.01 indicating a more homozygous nature of the population. This is the first report of microsatelitte based variations in Malin sheep breed and can be useful for development of a rational breeding strategy for genetic improvement of sheepin Malaysia which may benefit future conservation programmes.

A total of thirty-eight Mafriwal cattle were selected from a localcattle herd of a government cattle farm; of which 36 animals were sub-fertile Mafriwal female dams and two bulls which were considered as control animals (one male Mafriwal and one male Jersey). Two markers were used in the detection of Y chromosome in the sub-fertile female animal which are testis specific proteins Y-encoded (TSPY) and amelogenin (AMLX/AMLY) genes. The genes were amplified using PCR. The DNA bands from a normal male for TSPY gene size was approximately 260 bp while AMLX/ AMLY gene were approximately 341 and 467 bp. The examination of all samples showed that the sub-fertile cow revealedonly 467 bp while three fragments were detected in the control group; 260 bp (testis specific protein, Y-encoded gene), 341 and 467 bp (Amelogenin gene). The results showed that the sex chromosomeanomalies associated with Y chromosome did not occur in this group. These two sex markers can be used for the diagnosis of Y chromosome abnormality in a sub-fertile cow through polymerase chain reactionwhich is a rapid and reliable method for use in breeding herds.