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Morphological and Molecular Study on Ctenocephalides Fleas Isolated from Stray Dogs in Tehran
2021
Azadbeh, Sara | Dalimi, Abdolhossein | Jamshidi, Shahram
BACKGROUND: Various flea species have already been reported from dogs, among which the most important ones include Ct. felis, Ct. canis, and P. irritans. Fleas can cause annoyance in dogs and human and transmit a variety of bacterial, fungal, and viral agents to the host. In addition, they could function as an intermediate host of Dipylidium caninum and Hymenolepis diminuta. OBJECTIVES: Due to the lack of molecular species-associated identification data, we conducted the current study to differentiate Ct. felis and Ct. canis with molecular assay. METHODS: In the present study, 605 fleas were primarily collected from the dogs referred to Tehran Veterinary Faculty hospital. Subsequently, the flea species were identified under a microscope with morphological keys. Afterwards, COX1 genes of Ct. felis and Ct. canis were amplified via PCR and the locus was finally compared utilizing RFLP and sequencing. RESULTS: Totally, 605 fleas were isolated from 20 dogs. In morphological studies, three species were identified: Ctenocephalides felis, Ctenocephalides canis, Pulex irritans. Pulex irritans had the highest frequency (61.8 %). In molecular study, 552 bp fragment of COX1 gene in two species was amplified and seen on agarose gel. After sequencing, it was seen that two species sequences in COX1 locus had a similarity of 99 % and all of them depended on Ct. canis. In PCR-RFLP, in which Taq1 enzyme was used for differentiation of two species, the same result was obtained. CONCLUSIONS: Even though these two species of dog flea are distinct morphologically, their molecular differentiation using COX1 genes was not successful.
Afficher plus [+] Moins [-]Morphometric, Molecular and Phylogenic Analysis of Dactylogyrus Parasites in Cultivated Silver Carp (Hypophthalmichthys molitrix) and Big Head Carp (Hypophthalmichthys nobilis) in Guilan Province Using 28SrDNA Gene
2020
Daghigh Roohi, Javad | Dalimi, Abdolhossein | Pourkazemi, Mohammad | Ghasemi, Mohaddes | Shamsi, Shokoofeh
BACKGROUND: Dactylogyrus is one of the most common external parasites on the gills of Cyprind fish. These parasites are highly host specific and many species only have a specific host. OBJECTIVES: Since there are reports of silver carp specific Dactylogyrus species isolated from big head carp and vice versa, the investigation of Dactylogyrids have been done in these two fish species. METHODS: 81 silver carp and 82 big head carp were caught from 10 fish farms in Guilan province and after preparing wet mounts of body surface Dactylogyrus parasites divided and fixed by glycerin jelly. In order to perform morphometric assessments on captured images, Image J software was used for 7 point to point distances. Drawing of parasites was done by drawing tube and then compared by identification keys and parasites identified. For molecular investigation the genomic DNA was extracted from one parasite specimen and 28S rDNA region of Dactylogyrus specimens were amplified by related primers in PCR. RESULTS: Sequences were deposited in GenBank with accession numbers MG825611 and MG825765 respectively for D. hypophthalmichthys and D. suchengtaii isolated from Hypophthalmichthys molitrix, and also MH023397 and MH023399 respectively for D. aristichthys and D. nobilis isolated from Hypophthalmichthys nobilis. The phylogenetic tree shows the genetic affinity of isolated parasites from these two fish. CONCLUSIONS: It seems hybrid fish are sometimes produced accidentally in fish reproduction centers of Iran. Racial impurity of silver carp and big head carp is not only the reason of poorer breeding efficiency in fish farms but also these hybrid fish are hosts of more parasitic species.
Afficher plus [+] Moins [-]Association between the effacing (eae) gene and the Shiga-like toxin-encoding genes in Escherichia coli isolates from cattle.
1993
Mainil J.G. | Jacquemin E.R. | Kaeckenbeeck A.E. | Pohl P.H.
Two hundred ninety-six Eschericbia coli isolates from feces or intestines of calves with diarrhea were hybridized with 7 gene probes. One probe (the eae probe) was derived from the eae gene coding for a protein involved in the effacement of the enterocyte microvilli by the group of bacteria called attaching and effacing E coli (AEEC), and 2 probes were derived from genes coding for the Shiga-like toxins (SLT) 1 and 2 produced by the verocytotoxic E coli (VTEC). The other 4 probes were derived from DNA sequences associated with the adhesive properties of enteroadherent E coli (EAEC) to cultured cells (the EAF probe for the localized adherence pattern, probes F1845 and AIDA-1 for the diffuse adherence pattern, and the Agg probe for the aggregative adherence pattern). Hybridization results for the eae probe were in agreement, for all but 1 of the 8 isolates, with previously published phenotypic results of microvilli effacement. The latter was previously reported as effacing the microvilli of calf enterocytes, but was eae probe-negative. Two classes of isolates hybridized with the eae probe. Members of a first class (60 isolates) additionally produced a positive signal with 1 or both of the SLT probes (VTEC-AEEC isolates). Isolates hy- bridizing with the eae and the SLT1 probes were the most frequent: 56 isolates (ie, 93% of all VTEC-AEEC). Members of the second class (10 isolates) failed to hybridize with either SLT probe (non-VTEC-AEEC isolates). Most isolates of these 2 classes belong to only 4 serogroups: O5, O26, O111, and O118. In addition to these 2 AEEC classes, a VTEC class (20 isolates) was observed. Such isolates were positive with 1 or both SLT probes, but were negative with the eae probe. All but 1 isolate belonged to serogroups not found among the AEEC isolates. Only 7 of all AEEC and VTEC isolates were positive with the EAF, the F1845, or the AIDA-1 probe, and none were positive with the Agg probe. On the other hand, 32 non-VTEC, non-AEEC isolates were po.
Afficher plus [+] Moins [-]Second-generation pseudorabies virus vaccine with deletions in thymidine kinase and glycoprotein genes.
1987
Kit S. | Sheppard M. | Ichimura H. | Kit M.
Multiplex polymerase chain reaction assay for genotyping Clostridium perfringens.
1997
Meer R.R. | Songer J.G.
Blood type AB in the feline AB blood group system.
1996
Griot Wenk M.E. | Callan M.B. | Casal M.L. | Chisholm Chait A. | Spitalnik S.L. | Patterson D.F. | Giger U.
Prevalence of four enterotoxin (STaP, STaH, STb, and LT) and four adhesin subunit (K99, K88, 987P, and F41) genes among Escherichia coli isolates from cattle.
1990
Mainil J.G. | Bex F. | Jacquemin E. | Pohl P. | Couturier M. | Kaeckenbeeck A.
Colony hybridizations with DNA probes for 3 heat-stable (STaP, STaH, and STb) enterotoxins and 1 heat-labile (LT) enterotoxin and for 4 adhesins (K99, F41, K88, 987P) were performed on 870 Escherichia coli isolates to determine pathotypes prevalent among enterotoxigenic E coli (ETEC) isolated from cattle in Belgium. One hundred thirty-two E coli isolates (15.2%) hybridized with probes STaP, K99, and/or F41. The 5 other probes were not hybridized by E coli isolates. Therefore, only STaP enterotoxin and K99 and F41 adhesins were virulence factors of ETEC isolated from cattle. Two major pathotypes accounted for 95% of the ETEC: STaP+K99+F41+ (67.4%) and STaP+K99+ (27.3%). The last 5% of probe-positive isolates had STaP+, STaP+F41+, or K99+F41+ minor pathotypes. Of 12 American ETEC isolates also assayed, 7 were positive with STb and/or 987P probes (pathotypes STaP+STb+,STaP+ 987P+, or STaP+STb+987P+) and may be porcine- rather than bovine-specific enteropathogens. The remaining 5 American ETEC isolates belonged to 3 minor pathotypes (STaP+,STaP+F41+, and K99+F41+) also found among Belgian E coli isolates. Such isolates may be derivatives of STaP+K99+F41+ or STaP+K99+ ETEC after in vivo or in vitro loss of virulence genes and/or non-ETEC isolates, which have acquired virulence genes by in vivo transfer.
Afficher plus [+] Moins [-]Isolation and detection of antibiotics resistance genes of Escherichia coli from broiler farms in Sukabumi, Indonesia
2021
Aprilia Hardiati | Safika Safika | I Wayan Teguh Wibawan | Agustin Indrawati | Fachriyan Hasmi Pasaribu
Objective: This study aimed to isolate and identify Escherichia coli from broiler samples from Sukabumi, Indonesia. Also, antibiogram studies of the isolated bacteria were carried out consid¬ering the detection of the antibiotic resistance genes. Materials and Methods: Cloaca swabs (n = 45) were collected from broilers in Sukabumi, Indonesia. Isolation and identification of E. coli were carried out according to standard bacterio¬logical techniques and biochemical tests, followed by confirmation of the polymerase chain reac¬tion targeting the uspA gene. Antibiotic sensitivity test, using several antibiotics [tetracycline (TE), oxytetracycline (OT), ampicillin (AMP), gentamicin (CN), nalidixic acid (NA), ciprofloxacin (CIP), enrofloxacin (ENR), chloramphenicol, and erythromycin] was carried out following the Kirby Bauer disk diffusion method. Detection of antibiotic resistance coding genes was carried out by PCR using specific oligonucleotide primers. Statistical analysis was carried out with one-way anal¬ysis of variance. Results: The results showed that 55.6% (25/45) of the samples were associated with the pres¬ence of E. coli. Antibiotic sensitivity test showed that the E. coli isolates were resistant to TE (88%; 22/25), OT (88%; 22/25), AMP (100%; 25/25), CN (64%; 16/25), NA (100%; 22/25), CIP (88%; 22/25), ENR (72%; 18/25), chloramphenicol (0%; 0/25), and erythromycin (92%; 23/25). On the other hand, the antibiotic resistance coding genes were tetA (86.4%; 19/22), blaTEM (100%; 25/25), aac(3)-IV (0%; 0/16), gyrA (100%; 25/25), and ermB (13%; 3/23). It was found that chlor¬amphenicol is markedly different from other antibiotic treatment groups. Conclusion: Escherichia coli was successfully isolated from cloacal swabs of broiler in Sukabumi, Indonesia. The bacteria were resistant to TE, OT, AMP, CN, NA, CIP, ENR, and erythromycin. Chloramphenicol was more sensitive and effective than other antibiotics in inhibiting the growth of E. coli. The antibiotic resistance genes detected were tetA, blaTEM, gyrA, and ermB. [J Adv Vet Anim Res 2021; 8(1.000): 84-90]
Afficher plus [+] Moins [-]Detection of infectious canine hepatitis virus by TaqMan real-time PCR method
Wang, H.Y.;Choi, J.Y.;Lee, M.J.;Park, J.H.;Cho, M.R.;Han, J.C.;Choi, K.S.;Chae, J.S.(Chonbuk National University, Jeonju, Republic of Korea)E-mail:jschae@chonbuk.ac.kr
The aim of this work was the validation of a rapid real-time PCR assay based on TaqMan technology for the unequivocal identification of infectious canine hepatitis (ICH) virus, to be used directly on DNA purified from blood specimens. A real-time PCR system targeting at the E3 ORFA gene sequence of canine adenovirus type 1 was optimized and validated through comparative analysis of samples using conventional PCR system. The real-time PCR assay based on TaqMan technology could disclose 23 (37.7%) out of 61 samples as PCR positive. In contrast, 18 (29.5%) samples were found PCR positive when conventional PCR was applied on these samples.
Afficher plus [+] Moins [-]Identification of Hanwoo and Holstein meat using MGB probe based real-time PCR associated with single nucleotide polymorphism (SNP) in Melanocortin 1 receptor (MC1R) gene
2005
Park, S.D. (Chonnam National University, Gwangju, Republic of Korea) | Kim, T.J. (Chonnam National University, Gwangju, Republic of Korea) | Lee, J.I. (Chonnam National University, Gwangju, Republic of Korea), E-mail: jaeil@chonnam.ac.kr
The melanocortin 1 receptor (MC1R) plays an important role in regulation of melanin pigment synthesis within mammalian melanocytes. Mutations within the gene encoding MC1R have been shown to explain coat color variations within several mammalian species including cattle. To develope a rapid and accurate method for the identification of Hanwoo meat, we performed a single nucleotide polymorphism (SNP) analysis in Melanocortin 1 receptor (MC1R) gene using TaqMan∨® MGB probe-based real-time PCR. Two specific probes (one for Hanwoo and the other for Holstein and Black angus) were designed.
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