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Survey on Salmonella contamination of Golden Jackals by microbiological culture methods and PCR in Golestan and Mazandaran Provinces
2017
namroodi, somayeh | استاجی, حمید | قائمی, عزت الله | sharafi, seyyed vahhab
Introduction and objective: Salmonella spp. are zoonotic pathogens have been infected a wide range of domestic and wild animals. Opportunistic wild carnivores such as Golden jackal (Canis aureus) which stray in high numbers around the rural areas can act as potential sources of salmonella spp in humans and wild & domestic animals in North Iran.The object of this survey was to examine the Salmonella spp infection including the antibiotic-resistant pattern in golden jackals in Golestan and Mazandaran Province.Material and Methods: Between 2013 and 2015, fecal samples of 50 road-killed Golden jackals (Canis aureus), were collected and analyzed for Salmonella contamination by classical microbiological culture methods and PCR followed by serotyping and determining of antibiotic resistant pattern.Results: 5 Salmonella belonging to 2 serotypes: S typhymurium (3/5) and S arizona (2/5) were isolated by culturing and PCR. The rate of Salmonella contamination was similar between females and males and higher incidence detected in jackals under 2 years old.Conclusion: 10% Salmonella infection of sampled golden jackals highlights the neglected role of this species in zoonotic diseases dissemination and posing a great threat to human health in rural areas of Golestan and Mazandaran Provinces.The epidemiological study on role of wild animals in the spread of salmonella and developing strategy for salmonellosis prevention and control seems necessary.
Afficher plus [+] Moins [-]Molecular detection of Haemoproteus in homing pigeons (Colombia livia domestica) in Mazandaran Province
2017
Tabaripour, Seyed Reza | Youssefi, Mohammad reza | Rahbari, Sadegh | Arghavan, Mohammad
Background: Haemoproteus is a parasitic protozoa that over 120 species of it has been reported from wild aquatic birds, sparrows and other birds orders. So far, no study has been performed to determine the species of this protozoa in the north of Iran.Objectives: The aim of this study was to investigate the molecular and structural properties of Heamoproteus protozoa in the blood of infected pigeons in Mazandaran province.Methods: In the present study molecular investigation of Haemoproteus infection was carried out in domestic pigeons of Mazandaran province. For this purpose, samples obtained randomly from 150 pigeons in different regions of Mazandaran. At first, blood samples were stained with Gimsa stain and examined for presence of Haemoproteus gametocytes. Then, positive samples were used for PCR by Cytochrome b genes.. Results: Obtained results after morphological survey showed that 17 samples were positive indicating infection rate of 11.33%. Molecular investigation and analysis of PCR products showed that all of the samples belonged to Haemoproteus columbae species.Conclusion: So, being precisely familiar with this kind of protozoan and its species can limit many mistakes and be helpful in differential diagnosis of different species. This study has revealed that the most common species of Haemoproteus in Mazanadran province is Haemoproteus columbae.
Afficher plus [+] Moins [-]Prevalence and molecular characterization of Salmonella serovars in milk and cheese in Mansoura city, Egypt
2017
Amira Hussein El-Baz | Mohammed El-Sherbini | Adel Abdelkhalek | Maha Abdou Al-Ashmawy
Objective: This study was conducted to determine the prevalence of Salmonella in milk (farm bulk milk, raw market milk) and cheese (kareish, white soft cheese) samples that were collected randomly from farms, supermarkets, small vendors and shops in different districts of Mansoura city, Egypt.Materials and methods: A total of 100 farm bulk milk, raw market milk, kareish cheese and white soft cheese samples (25 of each) were screened for the prevalence of Salmonella spp. The Salmonella isolates were isolated and identified by conventional bacteriological techniques, which were further confirmed genetically by polymerase chain reaction (PCR) based on the presence of invA gene. Finally, the isolates were serotyped.Results: Salmonella could be detected in 15%(n=15/100) samples with a prevalence of 12%(n=3/25), 24%(n=6/25), 20%(n=5/25) and 4%(n=1/25) in raw market milk, raw farm bulk milk, kareish cheese and white soft cheese, respectively. The Salmonella isolates were serotyped into S. enteritidis 33.3%(n=9/27) which was the most frequent, followed by S. typhimurium 25.9%(n=7/27), S. heidelberg 14.8%(n=4/27), S. infantis 11.11%(n=3/27), S. tsevie 11.11%(n=3/27) and S. haifa 3.7%(n=1/27).Conclusion: The present study confirms the presence of Salmonella in milk and cheese samples in Mansoura, Egypt, indicating that the dairy products can act as potential sources of Salmonella infection. Thus, appropriate hygienic measures are suggestive for combating Salmonellosis in Egypt. [J Adv Vet Anim Res 2017; 4(1.000): 45-51]
Afficher plus [+] Moins [-]Prevalence and molecular detection of the causal agents of sub-clinical mastitis in dairy cows in Sirajganj and Pabna districts, Bangladesh
2017
Md. Humayun Kabir | Md. Ershaduzzaman | Md. Giasuddin | K. H. M. Nazmul Hussain Nazir | Md. Muket Mahmud | Md. Rafiqul Islam | Mohammed Sirajul Islam | Md. Rezaul Karim | Md. Abu Yousuf | Seikh Masudur Rahman | Md. Yousuf Ali
Objective: The present research work was undertaken with the objectives to investigate the prevalence and molecular detection of the causal agents of sub-clinical mastitis (SCM) in cows at milk shed areas in Sirajganj and Pabna districts, Bangladesh.Materials and methods: A total of 300 milk samples were randomly collected from Baghabari milk shed areas of Sirajganj and Pabna districts. The milk samples were subjected for California Mastitis Test (CMT) for identifying SCM. Total 81 positive samples were then used for the isolation and identification of associated bacteria and fungi using conventional microbiological examination and biochemical tests, followed by confirmation by polymerase chain reaction (PCR) using specific primers. Besides, universal primers were used for amplification and sequencing of PCR products where specific primers were not used. Results: The overall prevalence of SCM was 51% (n=153/300). Based on bacteriological examination and biochemical tests, several bacteria were identified in this study; the orgnaisms included Staphylococcus sp. (45.68%), Streptococcus uberis (14.81%), Escherichia coli (9.88%), Proteus sp. (19.75%), Salmonella sp. (1.23%), Acinetobacter sp. (7.41%), and fungus (1.23%). PCR technique confirmed the bacteria as Staphylococcus aureus (279-bp), Streptococcus uberis (884-bp), E. coli (16SrRNA 585-bp, stx1 606-bp, rfbO157 497-bp) and Salmonella sp. (Inv-A gene796-bp).Conclusion: This study reveals that SCM in dairy cattle is persisting in Sirajganj and Pabna districts of Bangladesh. Hygienic practices should be improved, and providing technical intereventions may reduce the rate of SCM in the study areas. [J Adv Vet Anim Res 2017; 4(4.000): 378-384]
Afficher plus [+] Moins [-]First report of decompression sickness (DCS) in a sei whale (Balaenoptera borealis) stranded in Southern Peninsular Malaysia
2017
Norsharina A. | Noordin M. M. | Aida M. | Fahmi | Tamimi M. A. A. | Kamaruddin I. | Nurnadiah A. H. | Nurliyana M. T. | Hassan M. D. | Nor-Yasmin A. R. | Munir M. N. | Syed Abdullah S. A. K. | Sarol K. | Norina L.
Decompression sickness, a condition in whales caused by bubble formation in certain body tissues from dissolved inert gases. It occurs during transition from a high pressure environment to one of lower pressure, resulting in a range of conditions from itching to joint pain, convulsions, and death. A carcass of a stranded Sei Whale, Balaenoptera borealis, found on the shores of southern coast of Peninsular Malaysia was presentedfor postmortem. Investigation results showed that the male Sei Whale, named Si Corner showed pathologic lesions as seen from histology with the formation of fibrosis, emphysema and edema in the lungs and hepatic atrophy which indicated chronic starvation. It believedthat he also suffering from “Barotrauma or decompression sickness” which affected the ear or lungs which lead to unbalanced movement due to changes in air pressure.This may have caused the whale to beach and consequent mortality. The pathologic lesions found give an insight into possible causes of death of beached whales inMalaysia.
Afficher plus [+] Moins [-]Molecular prevalence and species co-infection of bovine haemoparasites in Peninsular Malaysia
2017
Ibrahim A. R. | Maizatul A. M. | Chandrawathani P. | Jesse, F. F. A. | S. D., Ola-Fadunsin | Sani, R. A. | Amlizawathy A. | Sharma, R. S. K.
Bovine haemoparasites are cosmopolitan in distribution and are known to cause substantial losses to the cattle industry. In spite of their economic importance, there remains a dearth of information on their molecular epidemiology in many parts of the world including Malaysia. To ascertain the molecular prevalence and species co-infection of bovine haemoparasites in the country, blood samples were collected from 1,045 heads of beef and dairy cattle on 43 farms from six geographical zones throughout Peninsular Malaysia. Samples subjected to PCR amplification of parasite species-specific genetic fragments revealed that Anaplasma marginale was the most prevalent haemoparasite (72.6%),followed by Theileria orientalis(49.8%),Candidatus Mycoplasma haemobos ( 47. 0 % ),Babesia bovis(32. 5%), Babesia bigemina (30.5%) and Trypanosomaevansi(17.9%). A high percentage (92.1%) of cattle was infected with either one or more haemoparasites. Triple haemoparasite species co-infection was the most prevalent (25.6%), followed closely by double species co-infection (25.1%). The most common (8.8%) and significantly correlated(rs= 0.250; p<0.01) combination was A. marginale+ T.orientalis. The present study constitutes the first attempt in the country to document the molecular prevalence and species co-infection of bovine haemoparasites over a wide spatial distribution. The data obtained will facilitate treatment, control and prevention measures to improve the local cattle industry.
Afficher plus [+] Moins [-]Comparative methods in identification of bacteria from agricultural waste using biochemical tests and 16S RRNA UARR sequencing
2017
Norlindawati A. P. | Nurzillah M. | Siti Hajar I. | Marliah A. | M. Azlan J. | Nurhaslina A. R. | M. Noor I. | Rohana A. B.
Identification of microorganisms, including bacteria, are widely used especially in environmental studies, biotechnology, clinical microbiology, microbial forensics, and in research study. The conventional method of bacteria identification is based on phenotypic observation techniques by profiling an organism’s metabolic attributes or some aspect of its chemical composition. Then, interpretation of test results involves substantial subjective judgement. Currently, general 16S rRNA sequencing and specific PCR play an important role in the accurate and faster identification of bacteria. The aim of this study is to compare the identification of the genus or species of bacteria from agricultural waste using conventional microbiology biochemical test and molecular techniques PCR 16S rRNA universal amplified ribosomal region (UARR) sequencing. A total of 72 agricultural waste samples and 2 ATCC culture as positive control were tested. Out of two ATCC bacteria and fifteen bacteria isolates identified by the biochemical test, twelve species (71%) of bacteria gave exactly the same bacteria genus as the 16S rRNA sequencing results. Aeromonas hydrophilia, Alcaligenes faecalis and Acinetobacter calcoaceticus was revealed as Pseudomonas sp. from the sequencing results. As for Alcaligenes sp., the results from the sequencing is Stenotrophomonas maltophilia. Previous reports also showed different results of the same isolate which were from similar classification, and closely related to each other. The limited number of biochemical tests available in a laboratory will contribute to misidentification of a proposed specie.
Afficher plus [+] Moins [-]Analysis of COI Gene Region of Varroa destructor in Honey Bees (Apis mellifera) in Province of Siirt
2017
Ayan, Adnan | Aldemir, Osman Selcuk | Selamoglu, Zeliha
Varroa destructor is the most damaging ectoparasite to the beekeeping economy. The mite has different haplotypes. It is aimed to determine which haplotype is present by examining the cytochrome c oxidase subunit 1 (COI) gene region of V. destructor found in honey bees in Siirt region. Polymerase Chain Reaction (PCR) and Restriction Fragment Length Polymorphism(RFLP) methods were applied in the analysis of the COI gene region of V. destructor in Siirt region. To do this,V. destructor samples were collected from 387 enterprises in the Siirt region. DNA extraction followed the PZR.Subsequently, 1.5% agarose gel images were obtained by electrophoresis. The PCR products were then subjectedto XhoI and SacI restriction enzymes and 2% agarose gel images were obtained. 38 of the samples (10%) weresent to a private enterprise for sequencing. The obtained sequences were blasted and compared with thecorresponding reference sequences in GenBank.According to the results of PZR and RFLP obtained from the 387 V. destructor samples in the studytowards the COI gen region, all of the samples were found to be Korean haplotypes and Japanese haplotypeswere not found in any of 387 samples. At the same time, it was also confirmed that the 38 sequenced sampleswere Korean haplotypes.The results obtained from this study are significant in terms of forming a groundwork for futurestudies.
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