Heavy metals that enter marine environment and remain in the water as well as the sediments are accumulated by aquatic organisms, thus becoming highly good indicators to monitor metal accumulation in the long run. Metals are potentially harmful to humans and most organisms at varied levels of exposure and absorption. Northern East Mediterranean Sea is a crucial region as it is an area, shared by numerous aquatic species with pollutant factors such as heavy marine traffic, transportation ports, industry plants, iron and steel works, oil pipeline installation, and other small factories. While the previous part of this review (Review of heavy metal accumulation on aquatic environment in Northern East Mediterranean Sea part I: some essential metals) evaluated the data from previous studies concerning toxic effects of selected essential metals on seawater, sediment, and different tissues of aquatic animals, collected from different areas in Northern East Mediterrenean Sea since the 1990s, the present part intends to evaluate the data from previous studies on toxic effects of selected non-essential metals. For this purpose, 94 articles and 6 theses have been examined and a good deal of information has been gathered to open a forward-looking view of the studied area’s pollution. Althought there has not been any harmonization, when comparing heavy metals investigations in the bay, all studies have shown that consumption of aquatic species from the region causes no problem to human health.