Anaerobic ammonium oxidation (anammox), denitrifying anaerobic methane oxidation bacteria (DAMO) have received great attention for their excellent performance in nitrogen removal. However, not much study focused on the co-existence of anammox, DAMO, and denitrification in constructed wetlands, not to mention the advantage of their application in mitigating the necessary byproduct nitrous oxide (N₂O), methane (CH₄) from the biodegradation process. In this study, the result indicated the construction of integrated vertical constructed wetlands (IVCWs) contributed to the high-efficient stable simultaneous anammox, DAMO and denitrification (SADD) process for the nutrients removal, with denitrification being the least contributor to nitrogen reduction. Besides the succession of SADD process was largely the driver for the variation of N₂O, CH₄ emission. The structural equation method (SEM) further suggested that the three biological pathways of qnorB/bacteria, archaea/qnorB, and anammox/nirK accounted for the N₂O production, as were top-controlled by mcrA/DAMO in IVCWs. Besides the anammox-associated nitrifier denitrification was the main source for N₂O production. And that the trade-off effect between the CH₄ and N₂O production was exerted by the DAMO, while the influence was far from satisfactory under the methane constraints.

Wastewater containing high concentrations of nitriles, if discharged without an appropriate nonhazardous disposal strategy, will cause serious environmental pollution. During secondary sewage biological treatment, most existing bacteria cannot endure high-concentration nitriles due to poor tolerance and low degradation ability. The Rhodococcus rhodochrous strain BX2 screened by our laboratory shows high resistance to nitriles and can efficiently degrade these compounds. Compared with sole high-concentration nitriles present in the biodegradation process, the addition of glucose at a suitable concentration can effectively increase the biomass of BX2, promote the expression of nitrile-degrading enzyme genes, improve the activities of these enzymes and enhance the pollutant removal efficiency via carbon catabolite repression (CCR) mechanisms. Whole-genome sequencing revealed that the four key regulators of CCR identified in gram-negative and gram-positive bacteria are concomitant in BX2. This study provides an economically feasible strategy for the microbial remediation of high-concentration nitriles and other organic pollutants.

Whereas non-extractable residue (NER) formation is recognized as an important process affecting the ecological risk of organic contaminants in soils, it is commonly neglected in regional-scale multi-media models assessing chemical environmental fate and risk. We used a combined field and modeling study to elucidate the relative importance of NER formation to the reduction in available organic contaminants compared with fate processes commonly considered in risk assessment models (volatilization, leaching, and biodegradation). Specifically, four polycyclic aromatic hydrocarbons (PAHs), i.e., phenanthrene (Phe), pyrene (Pyr), benzo[a]pyrene (BaP), and benzo[ghi]perylene (BghiP), were spiked and measured in a one-year field pot experiment at four sites with diverse environmental conditions on the eastern Tibetan Plateau. The rate of NER formation was derived as the difference between the overall rate of decline in total-extractable PAH concentrations, obtained by fitting a biphasic first-order model to the measured concentrations, and the sum of the calculated rates of volatilization, leaching, and biodegradation. Our work shows that the total-extractable PAH concentration undergoes a rapid decline and a slow decline, with shorter overall half-lives (especially for BaP and BghiP) than those observed in earlier studies. Generally, NER formation was assessed to be the dominant contributor (64 ± 33%) to the overall decline of PAHs, followed by biodegradation (35 ± 32%); volatilization and leaching were the smallest contributors. In particular, heavier PAHs (i.e. BaP and BghiP) tend to have shorter half-lives in the rapid and the overall decline phase, indicating that the erroneous estimation of environmental fate and risks might be more pronounced for organic contaminants with a large molecular size. The trend of overall decline rates of PAHs displayed a combined effect of NER formation and biodegradation. This work indicates the need to consider NER formation as a process in multi-media models of chemical fate and risk.

Ochratoxin A (OTA) is a potent mycotoxin that frequently contaminates agro-products and threatens food safety. A highly efficient OTA degrading strain Lysobacter sp. CW239 was isolated, and the OTA degradation characteristics were investigated. A novel OTA degrading gene carboxypeptidase cp4 was successfully cloned and characterized from CW239. The heterologous recombinant was constructed by gene cp4 and expression vector pET-32a⁽⁺⁾ and overexpressed by E. coli BL21 CodonPlus™ (DE3). The recombinant protein rCP4 was purified, and the OTA-degrading activity was evaluated. Although OTA was efficiently degraded by CW239 (24-h degradation ratio of 86.2%), the 24-h OTA degradation ratio for rCP4 was only 36.8% at fairly high concentration (0.25 mg/mL) protein. The degraded product was obtained by immune affinity column (IAC) and determined by mass spectrometry (MS), and the degraded product was the less toxic ochratoxin α (OTα). Based on the serial investigations of this study, OTA might be simultaneously co-degraded by CP4 and another unknown degrading agent in that degrading strain.

Following the 16TAN Husky oil spill along the North Saskatchewan River (NSR), the occurrence and natural attenuation of the petroleum hydrocarbons were assessed by analyzing the littoral zone sediments/oil debris collected from July 2016 to October 2017. Husky oil-free, mixed sediment-Husky oil, and Husky oil debris samples were identified for all the collected samples. Shoreline sediments were contaminated by mixed biogenic, pyrogenic and petrogenic inputs prior to the spill. Oil stranded on the shoreline of NSR was moved or buried due to the very dynamic conditions of the shoreline, or cleaned through a series of cleanup activities after the spill. Most normal alkanes were naturally weathered, whereas most of the branched alkanes and all of the saturated petroleum biomarkers remained. Some lighter molecular weight (e.g., 2 to 3-ring) polycyclic aromatic hydrocarbons (PAHs) were lost rapidly after the spill, whereas sulfur containing components, e.g., dibenzothiophenes and benzonaphthothiiophenes, and those having a heavier molecular weight did not change markedly even 15 months post-spill. Similarly, some light hydrocarbons (e.g., <C₁₀) were lost over the first kilometers from the point of entry (POE), while heavier hydrocarbons did not show any major differences away from the POE. Very large inter-site and inter-survey discrepancies were found for samples. Evaporation into the air and dissolution into water, combined with biodegradation, were together or independently the main contributors to the loss of the light molecular hydrocarbons.

The presence of polystyrene (PS) waste increases constantly. Styrofoam, the most popular form of PS, is one of the major plastic pollutants in the environment. An efficient and environmentally friendly method of PS recycling is still needed. The biodegradation of PS by insects has been presented by researchers as a promising alternative to chemical, mechanical and thermal methods. The main aim of this study was to assess the survival, growth, and development of yellow mealworms (the larvae of Tenebrio molitor) fed with PS to determine if the insects are able to use PS as a source of mass and energy. The Dynamic Energy Budget (DEB) model was used to analyze the effects of food type on the growth trajectory and metabolism of tested organisms. We investigated five possible modes of influence of PS diet on DEB model parameters including a decrease of food availability, an increase in somatic maintenance power, an increase in costs for structure, allocation of energy, and a decrease in somatic maintenance power. Our results show that changes in the development of larvae fed with PS are mainly caused by a decrease in reserves density and reaction of the organism to the insufficient food supply. The inability or difficulty in completing the life cycle of T. molitor larvae fed with PS raises doubts about the use of mealworms as an effective technology for utilizing polystyrene.

The biodegradation of polychlorinated biphenyls (PCBs) occurs slowly when the degrading bacteria enter a low activity state, such as a viable but nonculturable (VBNC) state, under unfavorable environmental conditions. The introduction of resuscitation-promoting factor (Rpf) can re-activate VBNC bacteria. This study tested the feasibility of enhancing PCB biodegradation via supplementing Rpf in liquid culture and soil microcosms inoculated with Rhodococcus biphenylivorans strain TG9ᵀ. Exogenous Rpf resuscitated TG9ᵀ cells that had previously entered the VBNC state after 90 d of nutrient starvation, resulting in the significantly enhanced degradation of PCB by 24.3% over 60 h in liquid medium that originally contained 50 mg L⁻¹ Aroclor 1242. In soil microcosms containing 50 mg kg⁻¹ Aroclor 1242 and inoculated with VBNC TG9ᵀ cells, after 49 d of supplementation with Rpf, degradation efficiency of PCB reached 34.2%, which was significantly higher than the control. Our results confirmed that exogenous Rpf resuscitated VBNC TG9ᵀ cells by stimulating endogenous expression of rpf gene orthologs. The enhanced PCB-degrading capability was likely due to the increased cell numbers and the strong expression of PCB catabolic genes. This study demonstrated the role of Rpf in enhancing PCB degradation via resuscitating PCB-degrading bacteria, indicating a promising approach for the remediation of PCB contamination.

The identification and quantification of pharmaceutical and personal care products (PPCPs) in aquatic ecosystems is critical to further studies and elucidation of their fate as well as the potential threats to aquatic ecology and human health. This study used mass balances to analyse the sources, transformation, and transport of PPCPs in rivers based on the population and consumption habits of residents, the removal level of sewage treatment, the persistence and partitioning mechanisms of PPCPs, hydrological conditions, and other natural factors. Our results suggested that in an urbanized river of Guangzhou City, China, the daily consumption of PPCPs was the main reason for the variety of species and concentrations of PPCPs. Through the determination of PPCPs in the river water samples and a central composite design (CCD) methodology, the dominant elimination mechanisms of caffeine and carbamazepine from river water were photolysis and biodegradation, but that of triclosan was sorption rather than biodegradation. The mass data of 3 PPCPs were estimated and corroborated using the measured data to evaluate the accuracy of the mass balance. Finally, caffeine, carbamazepine and triclosan discharged from the Shijing River into the Pearl River accounted for 97.81%, 99.52%, and 28.00%, respectively, of the total mass of these three compounds in the surface water of Shijing River. The results suggest that photolysis are the main process of natural attenuation for selected PPCPs in surface waters of river systems, and the transfer processes of PPCPs is mainly attributed to riverine advection. In addition, the low concentration of dissolved oxygen inhibited the degradation of PPCPs in the surface water of Shijing River.

Under the increasingly intensive measures for surface water restoration in China, point source discharge has been strictly regulated; however, for non-point sources, which constitute a large part of surface water pollutants, effective control has been difficult to reach. A comprehensive understanding of the characteristics of non-point source pollutants is essential for surface water improvement programs of cities such as Ningbo, on the southeast coast of China. Ningbo has made tremendous efforts in the past few years to control point source pollutants, but available data and management strategies on the non-point source pollutants are still limited. To this end, leachates of representative non-point source samples from the territory of Ningbo, including cropland and wetland soil, urban channel sediment, and poultry manure, were examined and compared focusing on the fluorescence characteristics and biodegradability of the dissolved organic matter (DOM). Results indicated that biodegradable dissolved organic carbon (BDOC) accounting for the total DOC was 46.7 ± 0.7% for cropland, wetland (56.3 ± 6.8%), non-sewage channel (60.1 ± 0.4%), sewage channel (74.5 ± 1.1%), and poultry manure (62.7 ± 4.5%). The leachates of the studied samples showed significant differences in both the amount and composition of DOM. However, a fluorescence component representing tryptophan-like substances identified by the excitation-emission matrix (EEM) combined with parallel factor (PARAFAC) analysis effectively predicted the BDOC variations among the studied samples. Moreover, under the studied nutrient concentrations, which were equivalent to Grade III water quality in China, nutrient limitation of microbial degradation was not observed. Threats to water quality, especially excessive consumption of dissolved oxygen, could be posed by the non-point source leachates due to their high bioavailability, large distribution, and weak nutrient restraint. Further investigations, including a quantitative evaluation of the non-point source pollution contribution, and pollutant blocking techniques are required.

Volatile Petroleum Hydrocarbon (VPH) class effects on soil microbial composition were investigated using two next-generation sequencing (NGS) techniques – 454 pyrosequencing and ion torrent sequencing. Microbial activity was stimulated by adding different VPH compound classes to the sandy soil in comparison with live controls without VPH addition. Microbial community structure was significantly affected by the various VPH classes. At the genus level, Rhodococcus, Desulfosporosinus, Polaromonas, Mesorhizobium and Methylibium had the highest relative abundances in the straight-chain alkane (str-alk) treated soil as compared to the control (p < 0.05, 2 sample t-tests) while Pseudomonas was more dominant in the cyclic alkane (cyc-alk) contaminated soil. Pseudonocardia was significantly higher in relative abundance in the aromatic hydrocarbon (aro-H) treated batches as compared to the control (p < 0.05, 2 sample t-tests). A non-metric multidimensional scaling (NMDS) of the Bray Curtis similarity between microbial communities in the batches revealed at least 60% similarity for each treatment and also showed that VPH class was a statistically significant factor in shaping the bacterial communities in the soil treatments (Global R = 0.861, p < 0.01). The NGS platforms (454 GS Junior and Ion torrent) compared in this study did not appear to affect the outcomes of the microbial community structure and composition analysis.