Bacteria and their secreted extracellular polymeric substances (EPS) are widely distributed in ecosystems and have high capacity for heavy metal immobilization. The knowledge about the molecular-level interactions with heavy metal ions is essential for predicting the behavior of heavy metals in natural and engineering systems. This comprehensive study using potentiometric titration, Fourier-transform infrared (FTIR) spectroscopy, isothermal titration calorimetry (ITC) and X-ray absorption fine structure (XAFS) was able to reveal the functional diversity and adsorption mechanisms for Pb onto bacteira and the EPS in greater detail than ever before. We identified mono-carboxylic, multi-carboxylic, phosphodiester, phosphonic and sulfhydryl sites and found the partitioning of Pb to these functional groups varied between gram-negative and gram-positive bacterial strains, the soluble and cell-bound EPS and Pb concentrations. The sulfhydryl and phosphodiester groups preferentially complexed with Pb in P. putida cells, while multifunctional carboxylic groups promoted Pb adsorption in B. subtilis cells and the protein fractions in EPS. Though the functional site diversity, the adsorption of Pb to organic ligands occurred spontaneously through a universal entropy increase and inner-sphere complexation mechanism. The functional group scale knowledge have implications for the modeling of heavy metal behavior in the environment and application of these biological resources.

Wastewater containing high concentrations of nitriles, if discharged without an appropriate nonhazardous disposal strategy, will cause serious environmental pollution. During secondary sewage biological treatment, most existing bacteria cannot endure high-concentration nitriles due to poor tolerance and low degradation ability. The Rhodococcus rhodochrous strain BX2 screened by our laboratory shows high resistance to nitriles and can efficiently degrade these compounds. Compared with sole high-concentration nitriles present in the biodegradation process, the addition of glucose at a suitable concentration can effectively increase the biomass of BX2, promote the expression of nitrile-degrading enzyme genes, improve the activities of these enzymes and enhance the pollutant removal efficiency via carbon catabolite repression (CCR) mechanisms. Whole-genome sequencing revealed that the four key regulators of CCR identified in gram-negative and gram-positive bacteria are concomitant in BX2. This study provides an economically feasible strategy for the microbial remediation of high-concentration nitriles and other organic pollutants.

Previous studies worldwide have suggested the potential role of bioaerosols as ice-nuclei and cloud-condensation nuclei. Furthermore, their participation in regulating the global carbon cycle urges systematic studies from different environmental conditions throughout the globe. Towards this through one-year study, conducted from June 2015–May 2016, we report on atmospheric abundance and variability of viable bioaerosols, organic carbon (OC) and particles number and deduced mass concentrations from Indo-Gangetic Plain (IGP; at Kanpur). Among viable bioaerosols, the highest concentrations of Gram-positive bacteria (GPB), Gram-negative bacteria (GNB) and Fungi were recorded during December–January (Avg.: 189 CFU/m³), November (244 CFU/m³) and September months (188 CFU/m³), respectively. Annual average concentration of GPB, GNB and Fungi were 105 ± 58, 144 ± 82 and 116 ± 51 CFU/m³. Particle number concentration (PNC) associated with fine-fraction aerosols (FFA) predominates throughout the year. However, mineral dust (coarser particle) remains a perennial constituent of atmospheric aerosols over the IGP. Temporal variability records and significant positive linear relationship (p < 0.05) of GPB and GNB with OC and biomass burning derived potassium (K⁺BB) indicates their association with massive emissions from paddy-residue burning (PRB) and bio-fuel burning. Influence of meteorological parameters on viable bioaerosols abundance has been rigorously investigated herein. Accordingly, ambient temperature seems to be more affecting the bacteria (anti-correlation), whereas wet-precipitation (1–4 mm) relates to higher abundance of Fungi. High abundance of GNB during large-scale biomass burning emissions has implications to endotoxin exposure on human health. Field-based data-set of bioaerosols, OC, PNC and deduced mass concentrations reported herein could serve to better constraint their role in human health and climate relevance.

This study investigated the network of polycyclic aromatic hydrocarbon (PAH) degraders in the Yangtze estuarine and coastal areas. Along the estuarine gradients, Proteobacteria and Bacteroidetes were the dominant bacterial phyla, and forty-six potential PAH degraders were identified. The abundance of genes encoding the alpha subunit of the PAH-ring hydroxylating dioxygenases (PAH-RHDα) of gram-negative bacteria ranged from 5.5 × 10⁵ to 5.8 × 10⁷ copies g⁻¹, while that of gram-positive bacteria ranged from 1.3 × 10⁵ to 2.0 × 10⁷ copies g⁻¹. The PAH-degraders could represent up to 0.2% of the total bacterial community and mainly respond to PAHs and Cu concentrations, which indicate anthropogenic activities. Salinity and pH showed negative regulating effects on the PAH-degrading potential and the tolerance of bacteria to pollutants. PAH degraders such as Novosphingobium and Mycobacterium exhibit heavy-metal tolerance and core roles in the network of PAH degraders. These outcomes have important implications for bioremediation.

Small fringing marshes are ecologically important habitats often impacted by petroleum. We characterized the phylogenetic structure (16S rRNA) and petroleum hydrocarbon degrading alkane hydroxylase genes (alkB and CYP 153A1) in a sediment microbial community from a New Hampshire fringing marsh, using alkane-exposed dilution cultures to enrich for petroleum degrading bacteria. 16S rRNA and alkB analysis demonstrated that the initial sediment community was dominated by Betaproteobacteria (mainly Comamonadaceae) and Gammaproteobacteria (mainly Pseudomonas), while CYP 153A1 sequences predominantly matched Rhizobiales. 24 h of exposure to n-hexane, gasoline, dodecane, or dilution culture alone reduced functional and phylogenetic diversity, enriching for Gammaproteobacteria, especially Pseudomonas. Gammaproteobacteria continued to dominate for 10 days in the n-hexane and no alkane exposed samples, while dodecane and gasoline exposure selected for gram-positive bacteria. The data demonstrate that small fringing marshes in New England harbor petroleum-degrading bacteria, suggesting that petroleum degradation may be an important fringing marsh ecosystem function.

Airborne bacteria and fungi are important biological components of bioaerosol and play an important role in the conservation environmental. A microbiological study on bioaerosoles was carried out at the Municipal Waste Utilization Plant in Northern Poland and at points located beyond the facility at the distance of 150, 450, 1000 and 1250 m. The highest emission of bioaerosol occurred in the area of the waste landfill site and during compost pile turning. The total number of mesophilic bacteria, filamentous fungi and actinomycetes reached the values up to 104 CFU/m3. Strong air contamination with mannitol-positive and mannitol-negative staphylococci occurred remarkably more frequently in the area of the test facility than in the points beyond it. The number of indicator bacteria of Pseudomonas fluorescens was quite changeable and did not depend on a distance from pollutant emission source. The number of Escherichia coli rods remained at the low level of about 102 CFU/m3, and they were only isolated sporadically in the points beyond the landfill. The highest percentage of bacterial aerosol comprised Gram-positive cocci, and then Gram-positive bacilli. Mycological analyses confirmed the presence in the studied air of fungi with potentially allergic and mycotoxinogenic properties, such as: Aspergillus fumigatus, A. niger, A. terreus, Cladosporium herbarum and the genus Fusarium. The concentration level of microbial bioaerosol several times exceeded the threshold values recommended by the Polish Standards. The factors influenced the concentration of microorganisms in the tested air included the distance of the active landfill, weather conditions and the season.

Turbinaria ornata mediated silver nanoparticles (TOAg-NPs) were evaluated for antibacterial activity against 15 biofilm forming bacterial isolates. A field study in natural seawater for 60days showed antifouling activity of TOAg-NPs on stainless steel coupons (SS-304) coated with Apcomin zinc chrome (AZC) primer. Though TOAg-NPs showed broad spectrum of antibacterial activity, the maximum zone of inhibition was with Escherichia coli (71.9%) and a minimum with Micrococcus sp. (40%) due to the EPS secretion from Gram-positive bacteria. Compared to control coupons (18.9 [×103], 67.0 [×103], 13.5 [×104] and 24.7 [×104]CFU/cm2), experimental biocide coupons (71.0 [×102], 32.0 [×103], 82.0 [×103] and 11.3 [×104]CFU/cm2) displayed lesser bacterial population density. Toxicity studies revealed 100% mortality for Balanus amphitrite larvae at 250μgml−1 concentration within 24h, while 56.6% recorded for Artemia marina at the same concentration indicating less toxicity to non target species. It proved that AZC+TOAg-NPs prevent biofouling by its Ag-NS affinity and antimicrobial effectivity.

The aim of this study was to evaluate bacterial and fungal aerosol concentrations at the holy mosque (Al-Masjid Al-Haram). Air samples were collected from different locations inside and outside the holy mosque, during the month of Ramadan-2011 (the fasting month), using a portable Air-port MD8 gelatin filter sampler. Trypticase soya agar and Capek's dox agar media were used to count bacteria and fungi, respectively. The mean concentrations of airborne bacteria and fungi ranged between 105–106 colony forming unit per cubic meter of air (CFU/m3) outside, and ∼102–105 CFU/m3 inside locations. The highest outside bacterial concentrations 106 CFU/m3 were found at the Al Umra, Al Fatah and eastern plazas, and the highest inside fungal concentrations ∼105 CFU/m3 were found at the courtyard, expansion of 1st floor, and roof. Significant differences (P < 0.05) were found between bacterial and fungal concentrations inside and outside sampling locations, higher concentrations shifted towards to outside locations. Significant differences were also found between the bacterial and fungal concentrations inside–unclosed and semi-closed (P < 0.05) with inside-closed locations. Gram-positive bacteria, Bacillus and Micrococcus, and fungi, Aspergillus niger were the dominant microbial aerosol genera. The obtained data is considered a step to make up the gap about airborne microbial contamination inside the holy mosque, and microbial air quality should be studied along over the year at the holy mosque in the future.

Antifungal azoles are the most frequently used fungicides worldwide and occur as active ingredients in many antifungal pharmaceuticals, biocides, and pesticides. Azole fungicides are frequent environmental contaminants and can affect the quality of surface waters, groundwater, and drinking water. This study examined the potential of combined vacuum UV (185 nm) and UVC (254 nm) irradiation (VUV/UVC) of the azole fungicide tebuconazole and the transformation product 1,2,4-trizole on degradation and changes in ecotoxicity. In vivo ecotoxicity was examined before and after UV treatment using bioassays with test organisms from different trophic levels to integrate changes in biological effect of the parent compound and the degradation products. The test battery included the luminescent bacterium Aliivibrio fischeri, the Gram-positive bacterium Bacillus subtilis, the fungus Fusarium graminearum, the green microalga Raphidocelis subcapitata, and the crustacean Daphnia magna. The combined VUV/UVC treatment of tebuconazole in drinking water efficiently degraded the parent compound at the µg/L-mg/L level and resulted in transformation products with lower toxicity than the parent compound. A direct positive correlation was observed between the applied UV dose (fluence, J/cm²), the disappearance of tebuconazole, and the decrease in ecotoxicity. The combined VUV/UVC process does not require addition of supplementary oxidants or catalysts and our study suggests that VUV/UVC-mediated photolysis of azole fungicides in water can decrease the overall toxicity and represent a potentially environmentally friendly treatment method.

Differences in the culturable fractions of total and metal-tolerant bacteria inhabiting bulk soil of a metal-mine spoil heap and the rhizosphere of silver birch (Betula pendula) or bushgrass (Calamagrostis epigejos), completed with changes in total microbial community structure in the soil, were assessed by MIDI-FAME (fatty acid methyl ester) profiling of whole-cell fatty acids. In addition, the abundance of metal-tolerant populations among the culturable bacterial communities and their identity and the metal-tolerance patterns were determined. The high proportions of Cu- and Zn-tolerant bacteria that ranged from 60.6% to 94.8% were ascertained in the heap sites. Within 31 bacterial isolates obtained, 24 strains were Gram-positive and Arthrobacter, Bacillus, Rathayibacter, Brochothrix, and Staphylococcus represented those identified. Minimum inhibitory concentration (MIC) data indicated that several strains developed multi-metal tolerance, and the highest tolerance to Cu (10 mM) and Zn (12 mM) was found for Pseudomonas putida TP3 and three isolated strains (BS3, TP12, and SL16), respectively. The analysis of FAME profiles obtained from the culturable bacterial communities showed that Gram-positive bacteria predominated in bulk soil of all heap sites. In contrast, the rhizosphere communities showed a lower proportion of the Gram-positive group, especially for silver birch. For the total microbial community, mostly Gram-negative bacteria (e.g., Pseudomonas) inhabited the heap sites. The results suggest that the quantitative and qualitative development of heterotrophic microbiota in the soil of the metal-mine spoil heap seems to be site-dependent (i.e., rhizosphere vs. bulk soil), according to differences in the site characteristics (e.g., enrichment of nutrients and total metal concentrations) and impact of plant species.